G141464


Basic Information

Item Value
gene id G141464
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 5989926 ~ 5992865 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU190830
CAGCGTTGGTTCTGTGTATCTTTGGCTCTGGTGTCAGCTGTACAGTGTTTAACTAGGGAGGAGACTCTGTTAAGAATGGAAGATCCTTGCATTGACCGGCCCTttagctgtgtgtgtacagtgtgtatgATAAGAGCGTGGGGTAGAGGAAATGGGATATATTTAAACGTGTGTGGCAGTGGGGGATTGTGTGTTCAGATTTTTAAAGTTAGTCACGCACTGCAAGTGGACTGAGACTAGGTCGGGGAATTGGGTAATTAGATAAAAGGGGCATCACCTAAATGATGAGTCTGATgctatttcatgttttttgtattttcatcaaTTCTCATGAAAAGACCCACTCTAACAACGTGTTAGTTCATCTCGCATGCAAAACTGTCTGACTTCGTCGGTGACACTCAGCTCCAAGACCATTGGTTCCTGCCCAAGATGTTCATGTTTAAAAATGGCTATACAGAtataattcattttaaaaaaacaacacaaaaaacagcAGGCTACTGTAGTTTCTACAATTGTTATTCAAACATGAGGAATTAGTGCATTTATTAGGGACTATATTCAACGGCAGATTAATCCAGTTTTGCAGTTCTAGTGTTTATCTCCtgcagcaggacggtgtatATGCAACTGAATCCAAATataccacagtgtgtgtgttcatggtaatgaaggaacatgtcacccagtgcaacagtgtgacTTACTGATgggttttaatagtttttgacaacaatggagctcttaGGCTCAGAGGAAGAAGATCTTATCAGGCTtttagtgcgttccatttgtacccAGAAGTCGGAAATGCGCCCCCTGAAGTCGGATTTCAATATCaaacatggctgctccgtgcatcaacagtagtgaTAGCTGTAGTAACATAATTTTATttgcacttctgtcttatttgtgtttCATTAAACCAGCCGTGCACACATTCCTgttcaacttctatctgtggacatgttgctacgctgtttgtatgcacaaaaaagcagcgtaatgcgttgttatcaactgttattgctaacaatggctaacctggctagagctaacccCACTGTGAAAATCCAACTTGTTTTAAAGGAACGGGGTCAACTCGGGTATGACATAACTCCCAGCTCCGAGTTCAGAGGTACATGGAACGCACAActagctgcacacacacatacttgatAGTAGATACAGTTATTGTTGGTTTGGTTCCGCACATAAGATTTGATGACAATCagaaaaatttagaatacaactttttaaagtaaaattcagtgttttttgttttttttaaacagcatttGCCATTATTCCTATTGGTTATGTGTGTGGTAACATGAAACAAGGAAAATAGCACACAGCGTGCAGGTGAAAAGCAAACTGAAAGTGGGTTCCTTCACTGAAGTGTGTTCATACCGATATAACGGGTGTGTCACACAGGAGCCAAGTTAACATGTTTCCAGTCAAGACCGCACAAGTGGTGTTCAAATAGTTATTctctttaagttttttttttttttttttgtaggctTAGTTTGTGTAAATCATTATTTAGGTCTTATTTATCATATTCAGTTACGTTATCATAACCAATAGGATTGAGGGCCGTGACTATCGCAGACGACAGAGGCTGTAACGAAACAGAATTGTCCTTTGTTTTCTGGCTCCACTCTCTAAATGTTCACATAATCCTGAGATGCTGTCAAAAACAGCCCTCTCAGTATATTATTACAAATATTTGAACTACACTTgatgttttaaaatatatttttttttattttctcataaAGGCAGAGTTGTACTGTTTGGAAGTTATTCCTATATCTGTGATTGGCCCAGCTGTCAGCGGGCCCAGTGGGGATGGACTGCATTGTGGATTGTGACTATTGAACCAAAGACATTTTGAGATTTGCATCACAGCCTTGTTTACATATTAGCCATGCATATGTACTGCAAGTGGACTGATGTACCAGATGAGATGGAAATGTCAAGTCTGTCTTATGCAATTTAACACAGTGCTACTGAGAGTCACACGCCACTTAGTTTTCCTCCCAGACAGCAGGAAGCAGCCACTGAGACAGAgcgtgggggaaaaaaagaagagttcAGTGGTGAGTTTGGAACTTGACATTGTTCTGCTGGTACTGCTGACTGGTACTACTGTTGGGACTGAAATTCCAAGGCAACTAGAATAAACGGAATTTTAGACAATGGTACATGCTTTTATAATGTTTAGTCATGTTGAATGTGTGGTTGTTACTGATGTTGGTGATCTAAATTTTATCTCTGTTTGAAATGGCATCTTAGGCAAGATGAGCAGCCACTTGCAGAATGCTCTTCCTGCAAGTGGTGCTTTGTTCAACTTGGTTAAGCCCAggtcagaccaaagatttgtgaCGAGACAAAACCGTTTTAGAACGTCGCAGGGAAAAGTAGCGGCGGTCTGAACCGGCTcacgtctcagctcgactcaaaccagctgatggcttcgctgcgactcagctggtcaggtctccagaggctggttttagaacaaAAGGGACATCCCCTGTTTCAACttccaatagagaagtcagctggtcaagtcagctacaaactctagaaataaaatgatccataatctattttatttctatgttacaAACTTTCAACTAGTCGAAACggcagagttttagacggagGCTCAGTTTTtgctagcctggatgccagccgaacttagccccgcccacaacattcaaggtcgggaagttcacattctgactagaatctgagtatgaccatgtCAGGCTAAGTTTTTGCctattcatcactagaaatgcagCTGTGGCAAGCACTCCTTAGTATCACTaatgttatccacattcatatttagatccaacaaatgatatatcagCTACAAAAAGCCTGGATGTCGGAAGTTCGAACAAAAGTACAAAG

Function

GO: NA

KEGG:

id description
ko00310 Lysine degradation

RNA

RNA id representative length rna type GC content exon number start site end site
TU190830 True 2940 lncRNA 0.41 1 5989926 5992865

Neighbor

gene id symbol gene type direction distance location
ap1s1 ap1s1,LOC107666294,LOC105921790,LOC103148860,LOC103385557 coding upstream 49 5969946 ~ 5989877 (+)
LOC120573536 NA coding upstream 220030 5765068 ~ 5769896 (+)
zgc:92664 LOC101479333,LOC104937155,LOC102198965 coding upstream 295427 5686218 ~ 5694499 (+)
alox12 alox15,LOC104937156 coding upstream 310370 5647734 ~ 5679556 (+)
pelp1 LOC103362103 coding upstream 350069 5620440 ~ 5639857 (+)
trnat-agu_5 NA coding downstream 35775 6028640 ~ 6028713 (+)
zanl LOC108242291 coding downstream 44567 6037432 ~ 6146624 (+)
mblac1 mblac1 coding downstream 263428 6256293 ~ 6260003 (+)
LOC120573493 NA coding downstream 274499 6267364 ~ 6277341 (+)
mpdu1b mpdu1 coding downstream 287567 6280432 ~ 6288231 (+)
G141292 NA non-coding upstream 373828 5607360 ~ 5616098 (+)
G141331 NA non-coding upstream 406670 5582580 ~ 5583256 (+)
G141329 NA non-coding upstream 408855 5580698 ~ 5581071 (+)
G141325 NA non-coding upstream 412516 5576928 ~ 5577410 (+)
G141324 NA non-coding upstream 413400 5576251 ~ 5576526 (+)
G141465 NA non-coding downstream 1790 5994655 ~ 5996390 (+)
G141490 NA non-coding downstream 183229 6176094 ~ 6177174 (+)
G141497 NA non-coding downstream 337625 6330490 ~ 6335421 (+)
G141531 NA non-coding downstream 383161 6376026 ~ 6378373 (+)
G141550 NA non-coding downstream 458796 6451661 ~ 6452676 (+)
G141063 NA other upstream 1502319 4483692 ~ 4487607 (+)
G141060 men1 other upstream 1544979 4440638 ~ 4444947 (+)
zgc:112271 LOC103361642,LOC104959592,LOC100706616,LOC104935668 other upstream 1674381 4313151 ~ 4315545 (+)
mllt3 mllt3 other upstream 2556123 3256513 ~ 3433803 (+)
ablim2 ablim2 other upstream 3035236 2828052 ~ 2954690 (+)
trnaw-cca_15 NA other downstream 244138 6237003 ~ 6237074 (+)
drap1 drap1 other downstream 578856 6571721 ~ 6578757 (+)
LOC120573071 map3k11 other downstream 596086 6588951 ~ 6640245 (+)
LOC120573538 NA other downstream 1723739 7716604 ~ 7721656 (+)
LOC120572330 LOC107104736,LOC106920517,LOC103140598,LOC106947113 other downstream 1997333 7990198 ~ 7997708 (+)

Expression


Co-expression Network