Gene
RNA
| Item | Value |
|---|---|
| gene id | G141060 |
| gene name | men1 |
| gene type | unknown |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053125.1 |
| NCBI id | CM020922.1 |
| chromosome length | 39125861 |
| location | 4440638 ~ 4444947 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| men1 | Predicted to enable Y-form DNA binding activity; chromatin binding activity; and transcription cis-regulatory region binding activity. Acts upstream of or within negative regulation of transcription, DNA-templated. Predicted to be located in nucleus. Predicted to be part of histone methyltransferase complex. Predicted to be active in chromatin. Is expressed in several structures, including digestive system; endoderm; head mesenchyme; intermediate cell mass of mesoderm; and nervous system. Human ortholog(s) of this gene implicated in endocrine gland cancer (multiple); hyperparathyroidism; and multiple endocrine neoplasia type 1. Orthologous to human MEN1 (menin 1). |
| description |
|---|
| PREDICTED: menin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU190255 | True | 1117 | TUCP | 0.53 | 3 | 4440638 | 4444947 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120572661 | NA | coding | upstream | 141048 | 4286328 ~ 4299590 (+) |
| si:ch211-212k18.7 | NA | coding | upstream | 157967 | 4271925 ~ 4282671 (+) |
| LOC120572240 | NA | coding | upstream | 187796 | 4236291 ~ 4252842 (+) |
| rwdd | rwdd4 | coding | upstream | 230283 | 4205927 ~ 4210355 (+) |
| LOC120573426 | NA | coding | upstream | 282484 | 4149918 ~ 4158154 (+) |
| rtn3 | LOC103359706,LOC108242286 | coding | downstream | 2462 | 4447409 ~ 4479287 (+) |
| si:dkey-28a3.2 | NA | coding | downstream | 52501 | 4497448 ~ 4511964 (+) |
| eml3 | eml3,LOC100700327,LOC101475149 | coding | downstream | 83751 | 4528698 ~ 4594420 (+) |
| mta2 | mta2 | coding | downstream | 152085 | 4597032 ~ 4641652 (+) |
| cth1 | LOC104936466,LOC104960793 | coding | downstream | 201576 | 4646523 ~ 4649189 (+) |
| G141052 | NA | non-coding | upstream | 72301 | 4366561 ~ 4368337 (+) |
| G141054 | LOC103391650,LOC104940820 | non-coding | upstream | 81180 | 4358921 ~ 4359458 (+) |
| G141045 | pygm,pygmb,LOC103391662,LOC106531364 | non-coding | upstream | 98332 | 4332302 ~ 4342306 (+) |
| G141044 | NA | non-coding | upstream | 108651 | 4330856 ~ 4331987 (+) |
| G140925 | NA | non-coding | upstream | 766170 | 3674091 ~ 3674468 (+) |
| G141079 | NA | non-coding | downstream | 42793 | 4487740 ~ 4487994 (+) |
| G141080 | NA | non-coding | downstream | 43334 | 4488281 ~ 4488527 (+) |
| G141082 | LOC103359705 | non-coding | downstream | 45046 | 4489993 ~ 4490601 (+) |
| G141084 | NA | non-coding | downstream | 47730 | 4492677 ~ 4493034 (+) |
| G141093 | NA | non-coding | downstream | 196758 | 4641705 ~ 4664198 (+) |
| zgc:112271 | LOC103361642,LOC104959592,LOC100706616,LOC104935668 | other | upstream | 125093 | 4313151 ~ 4315545 (+) |
| mllt3 | mllt3 | other | upstream | 1006835 | 3256513 ~ 3433803 (+) |
| ablim2 | ablim2 | other | upstream | 1485948 | 2828052 ~ 2954690 (+) |
| G140613 | NA | other | upstream | 2381271 | 2055439 ~ 2059367 (+) |
| G140594 | NA | other | upstream | 2408413 | 2022592 ~ 2032225 (+) |
| G141063 | NA | other | downstream | 38745 | 4483692 ~ 4487607 (+) |
| trnaw-cca_15 | NA | other | downstream | 1792056 | 6237003 ~ 6237074 (+) |
| drap1 | drap1 | other | downstream | 2126774 | 6571721 ~ 6578757 (+) |
| LOC120573071 | map3k11 | other | downstream | 2144004 | 6588951 ~ 6640245 (+) |
| LOC120573538 | NA | other | downstream | 3271657 | 7716604 ~ 7721656 (+) |
