G141054 (LOC103391650,LOC104940820)


Basic Information

Item Value
gene id G141054
gene name LOC103391650,LOC104940820
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 4358921 ~ 4359458 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU190239
GTGTCCGTGAGGTCCTGGACCCTGGCCaataggaggaggagggggctgCATCCAGGGGGGAGGCAGGCCGTTGGGGTTTGGGGGCATAGGGGGGCCTCCCATGTTGGGCATGGGGGGAGGGTAGTTGTGGGGTCCTCCATGACCACCATGCCCTCCGTGCATGCCATGGTAGTTCCTGTTCTCAGTCGGACCAGAGCTCATCCAAGGAGGCCGGTTCTGCTGTTGTGGCTGATTATTGTTGGGTCCTGAGGACCGATGCCCTCCGCCTTGGGTGTTGGAGTGTCCTCCACCAGATGTGGGGACAGGAGCCTCCCCTAGCTCAGCCATCAGGGACAGATACTCCTTGTCCATACGAGCCTTGTCCTGGGCTGACTGAGGAGGCTCGCCACCTGTTGCTCTGTGGGCGGCGAATGAGCTACACAAAGCAAAACAGCAACACCGTTACAAAAA

Function

NR:

description
PREDICTED: splicing factor 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190239 True 450 lncRNA 0.60 2 4358921 4359458

Neighbor

gene id symbol gene type direction distance location
LOC120572661 NA coding upstream 59331 4286328 ~ 4299590 (+)
si:ch211-212k18.7 NA coding upstream 76250 4271925 ~ 4282671 (+)
LOC120572240 NA coding upstream 106079 4236291 ~ 4252842 (+)
rwdd rwdd4 coding upstream 148566 4205927 ~ 4210355 (+)
LOC120573426 NA coding upstream 200767 4149918 ~ 4158154 (+)
rtn3 LOC103359706,LOC108242286 coding downstream 87951 4447409 ~ 4479287 (+)
si:dkey-28a3.2 NA coding downstream 137990 4497448 ~ 4511964 (+)
eml3 eml3,LOC100700327,LOC101475149 coding downstream 169240 4528698 ~ 4594420 (+)
mta2 mta2 coding downstream 237574 4597032 ~ 4641652 (+)
cth1 LOC104936466,LOC104960793 coding downstream 287065 4646523 ~ 4649189 (+)
G141045 pygm,pygmb,LOC103391662,LOC106531364 non-coding upstream 16615 4332302 ~ 4342306 (+)
G141044 NA non-coding upstream 26934 4330856 ~ 4331987 (+)
G140925 NA non-coding upstream 684453 3674091 ~ 3674468 (+)
G140896 NA non-coding upstream 779574 3523111 ~ 3579347 (+)
G140895 NA non-coding upstream 844516 3514176 ~ 3514405 (+)
G141052 NA non-coding downstream 7103 4366561 ~ 4368337 (+)
G141079 NA non-coding downstream 128282 4487740 ~ 4487994 (+)
G141080 NA non-coding downstream 128823 4488281 ~ 4488527 (+)
G141082 LOC103359705 non-coding downstream 130535 4489993 ~ 4490601 (+)
G141084 NA non-coding downstream 133219 4492677 ~ 4493034 (+)
zgc:112271 LOC103361642,LOC104959592,LOC100706616,LOC104935668 other upstream 43376 4313151 ~ 4315545 (+)
mllt3 mllt3 other upstream 925118 3256513 ~ 3433803 (+)
ablim2 ablim2 other upstream 1404231 2828052 ~ 2954690 (+)
G140613 NA other upstream 2299554 2055439 ~ 2059367 (+)
G140594 NA other upstream 2326696 2022592 ~ 2032225 (+)
G141060 men1 other downstream 81180 4440638 ~ 4444947 (+)
G141063 NA other downstream 124234 4483692 ~ 4487607 (+)
trnaw-cca_15 NA other downstream 1877545 6237003 ~ 6237074 (+)
drap1 drap1 other downstream 2212263 6571721 ~ 6578757 (+)
LOC120573071 map3k11 other downstream 2229493 6588951 ~ 6640245 (+)

Expression


Co-expression Network