LOC120573426



Basic Information


Item Value
gene id LOC120573426
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 4149918 ~ 4158154 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039823149.1
AGAAGAGGATGGCTGCCTCAAAGCTCCCAAATAAAAGatTTACTTTAATTGAAGTCCTTGGCATGTTGGGTGTAGGTGACGGCCCAGACAAGGCATGCAACATTGCAATCATACCTCAAAATGAGAAAGATGCCATTATAAGTGATTGTGATAGTGATGGGTCAGATATGGCCTATGAGGGGGAGATGGGCCATTTGCCAGCCAGGATTTTAAATGCACATGCGGAACTGTTGGAGACAGATGATGACCGGAACAAAACTGAGTATGGAGTTGTCACTATGGCAACAAACGGACAACAAATGGAGAAGAGCTACGCTGAGTCCGTTGTCAAACGATGGAACAAAGAGCGACATGCTTTTGACCAAGTCCGACAACCACAATGCATCAAGCAATATAATGAGCATATGGGAGGTGTTGATCTTCATGACCAACAGGCCTCAAGATACAGCATCACAATCAGGTCCAAGAAATGGTTGTGGCCCATCTTTGCATGGTCTCTCAACAGTGCACTCGTGAATAGCTATTACTTTTACAGAGATGTTATGGGAGGGACCATTCACCTGCTCACCTTCACACGGGTAGTGGCACAATCTCTTATACAAAGGTTTGGCACAAAGCCACTGAGCCATGGAAGGAGATCTCTACTGGCCACTACTGTTCGAGATCAAGCAAGATATGACCAAGTCTCTCACTGGCCAGTCAACACAGGGAATCGGTTCTTGAGATGTCGTCTTTGAGATAAACGCACCACCTATGCATGTGAGAAATGCAACACTCCACTGCATATTGAGTGCTTCAAGAGATACCATAGAAAGTAGAAAAGAAGATAAAAGTGAATATAAAGGGCTGAAAGGGCCAACAAATAAAGACTATAGGAGTACAagagacaaaatgtttttttgagaAAGGTCAGTTGAGTCAAAAGATGCTGTATGACAGTGGGACGTCAGGCCTCTATCCTAAATGTTAACTTTATGTTCTCTGTTACTGTAATAAGAAATAGTTTTATAGTTCAAAATAGTTTTACAGAAACAGAATCAAGCACTTTGTTCTGGTGCCTACCTCTTTACCGTATACCTGCCTCTAatctaaatacatttaatttttgtTACATGAGGCCTCTTCTTGATGGTATACTCGAGGGTACATCGTTCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039823149.1 True 1155 mRNA 0.42 2 4149918 4158154

Neighbor


gene id symbol gene type direction distance location
lrch4 lrch4 coding upstream 362623 3693038 ~ 3787295 (+)
LOC120572274 NA coding upstream 679708 3462421 ~ 3470210 (+)
hacd4 hacd4 coding upstream 982162 3156794 ~ 3167756 (+)
afap1 afap1 coding upstream 1040984 2956348 ~ 3108934 (+)
zcchc4 LOC104953644,LOC104953641 coding upstream 1325903 2808900 ~ 2824015 (+)
rwdd rwdd4 coding downstream 47773 4205927 ~ 4210355 (+)
LOC120572240 NA coding downstream 78137 4236291 ~ 4252842 (+)
si:ch211-212k18.7 NA coding downstream 113771 4271925 ~ 4282671 (+)
LOC120572661 NA coding downstream 128174 4286328 ~ 4299590 (+)
rtn3 LOC103359706,LOC108242286 coding downstream 289255 4447409 ~ 4479287 (+)
G140925 NA non-coding upstream 475450 3674091 ~ 3674468 (+)
G140896 NA non-coding upstream 570571 3523111 ~ 3579347 (+)
G140895 NA non-coding upstream 635513 3514176 ~ 3514405 (+)
G140884 NA non-coding upstream 687735 3461858 ~ 3462183 (+)
G140832 H2AFV non-coding upstream 692532 3455522 ~ 3457386 (+)
G141044 NA non-coding downstream 172702 4330856 ~ 4331987 (+)
G141045 pygm,pygmb,LOC103391662,LOC106531364 non-coding downstream 174148 4332302 ~ 4342306 (+)
G141054 LOC103391650,LOC104940820 non-coding downstream 200767 4358921 ~ 4359458 (+)
G141052 NA non-coding downstream 208407 4366561 ~ 4368337 (+)
G141079 NA non-coding downstream 329586 4487740 ~ 4487994 (+)
mllt3 mllt3 other upstream 716115 3256513 ~ 3433803 (+)
ablim2 ablim2 other upstream 1195228 2828052 ~ 2954690 (+)
G140613 NA other upstream 2090551 2055439 ~ 2059367 (+)
G140594 NA other upstream 2117693 2022592 ~ 2032225 (+)
G140582 NA other upstream 2119291 1929623 ~ 2030627 (+)
zgc:112271 LOC103361642,LOC104959592,LOC100706616,LOC104935668 other downstream 154997 4313151 ~ 4315545 (+)
G141060 men1 other downstream 282484 4440638 ~ 4444947 (+)
G141063 NA other downstream 325538 4483692 ~ 4487607 (+)
trnaw-cca_15 NA other downstream 2078849 6237003 ~ 6237074 (+)
drap1 drap1 other downstream 2413567 6571721 ~ 6578757 (+)

Expression



Co-expression Network