LOC120572274


Basic Information

Item Value
gene id LOC120572274
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 3462421 ~ 3470210 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821510.1
GCTACGTGCCTGTGGTGCGGGCTAGCGCGGTCACGGTGGAGTTCAGTCAGTTGGTTGAGCCTTCAACATGGCTTCTGGCAACGACAGGGGAGCGTGGCTGCAGTGACGATGAATTGGACTCATTGATCACAGGAATTAAGAGCACAATGCCAGATGCTGGGTGCAGAGTAGTCAAAGGTGCTCTACTTGCACAGGGACACAGAGTGCAATGGGACAGAGTGTATGCATCCATGCATCGCGTGGACAGTGTAGGTGTGCTTTCCAGGATGACTCGTCTGAGATGTGTGGTGAGGAGGACGTACACGGTTCCTTACCCAAAGTACATGGTGCACATTGACACCAATCACAAGCTCATCAGGTACAACTTTGTTATCTTTGGGGGAATAGATGGCTATTCAAGAAAGATGATGTACCTCAAGGTAGCAGACAACAACCGATCTGATACACACCTGGCATTCTTCAATGAAGCTGTGAATGAGCATGGGTTTCCTCTGAGaGTGAGAGGAGATCACGGAGGAGAAAATGTGGGGATAGCGGAATTAATGTTCACAGTTCGTGGAACTGACATTAACAGCATCATTGCGGGGAAAAGCGTACACAATCAGCGGATTGAGCGCCTCTGGCGTGATTTGTTCATGAGTGTTACAGGAGTGTATTACAATATCCTGCACTCTCTTGAGGACGAACACCTACTTGACATCAGCAACGTCCTACACATATTCTGCTGCCACTATGTTTTCCTACCGCGCATTCAGGCAAGCCTAGATGTCTTCAGTGATGCGTGGGACAACCATCCCATCAGGACTGAGCAGAACTTGACACCAAATCAGTTGTGGCAGTTGGGCCAGGCCCTTAACCCCGTTGCAGATCCTGATTCTGAGGGAATACCCATCCCAGAGATTCAATGGGAGGAGAGTGGCTACACAAATGAGCCTCATTCCGGGGTCAATATCCCTGAACTGGACAGTCCTCTTTTGGATCTGGAAATGATAGCACTGCGAGACAACATGGATCCATTGCAGCAATCTGACTGTTTTGGGGCGGATATATACCTCAACACTGTCCAATACGTTGAGAACTTAATTGAGGCAAGATAAGAGCATGTGGCATCCTTGGCACTTTCCAGTGGCTTCCTGTGACTTGGACCAAAAATTTAACAAACTACTTTGgaacatttcaaatattttgaTTGTGCCTTATGCTAGGAGCCTCCATACTAATTGACACTACAAATGAATACAGTAAATTAGTAAGCTGAGTCACATTTGGTGCTGCATCCTGGGAAAGAACGTGGTACAAAGACTTTGTCCTCCATAGACTGTGTGGACCATCGCAGAGGATTTCCAGGACCTAACAGCTGCAGCTCAGTCAGCAGAAAATTCCATAGGAAAAGCCTTTTCAGACAAATGATTGAGTTAGTAGATACCTTTcagcaaaaacattaaaaccaaCCTGCCATATTATTTTGGTCCCCCTTGTGCTGCCAAAACAGCCCAGACACAATTGGGGCATGGATTCAGGACTGTTGAGGTGGTACTGGAATGTTGGCACCAGGTCCTTTTAGGTGTTGTTGCtgggtttttttcaacattcatgGAGCGTTGACTTAATAGTatgaaatgtactttttttttacttgcgcTTTGCATGCTATGTAGATAAGACATGTTA

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821510.1 True 1671 mRNA 0.46 7 3462421 3470210

Neighbor

gene id symbol gene type direction distance location
hacd4 hacd4 coding upstream 294665 3156794 ~ 3167756 (+)
afap1 afap1 coding upstream 353487 2956348 ~ 3108934 (+)
zcchc4 LOC104953644,LOC104953641 coding upstream 638406 2808900 ~ 2824015 (+)
mad2l1 mad2l1,LOC102790739,LOC103155071,LOC106941438 coding upstream 793290 2664689 ~ 2669131 (+)
ank2b ank2,LOC103361685,LOC107384730 coding upstream 1012179 2278934 ~ 2450242 (+)
lrch4 lrch4 coding downstream 222828 3693038 ~ 3787295 (+)
LOC120573426 NA coding downstream 679708 4149918 ~ 4158154 (+)
rwdd rwdd4 coding downstream 735717 4205927 ~ 4210355 (+)
LOC120572240 NA coding downstream 766081 4236291 ~ 4252842 (+)
si:ch211-212k18.7 NA coding downstream 801715 4271925 ~ 4282671 (+)
G140884 NA non-coding upstream 238 3461858 ~ 3462183 (+)
G140832 H2AFV non-coding upstream 5035 3455522 ~ 3457386 (+)
G140839 NA non-coding upstream 24437 3437537 ~ 3437984 (+)
G140837 NA non-coding upstream 26283 3435852 ~ 3436138 (+)
G140836 NA non-coding upstream 26743 3435460 ~ 3435678 (+)
G140895 NA non-coding downstream 43966 3514176 ~ 3514405 (+)
G140896 NA non-coding downstream 52901 3523111 ~ 3579347 (+)
G140925 NA non-coding downstream 203881 3674091 ~ 3674468 (+)
G141044 NA non-coding downstream 860646 4330856 ~ 4331987 (+)
G141045 pygm,pygmb,LOC103391662,LOC106531364 non-coding downstream 862092 4332302 ~ 4342306 (+)
mllt3 mllt3 other upstream 28618 3256513 ~ 3433803 (+)
ablim2 ablim2 other upstream 507731 2828052 ~ 2954690 (+)
G140613 NA other upstream 1403054 2055439 ~ 2059367 (+)
G140594 NA other upstream 1430196 2022592 ~ 2032225 (+)
G140582 NA other upstream 1431794 1929623 ~ 2030627 (+)
zgc:112271 LOC103361642,LOC104959592,LOC100706616,LOC104935668 other downstream 842941 4313151 ~ 4315545 (+)
G141060 men1 other downstream 970428 4440638 ~ 4444947 (+)
G141063 NA other downstream 1013482 4483692 ~ 4487607 (+)
trnaw-cca_15 NA other downstream 2766793 6237003 ~ 6237074 (+)
drap1 drap1 other downstream 3101511 6571721 ~ 6578757 (+)

Expression


Co-expression Network