mad2l1 (mad2l1,LOC102790739,LOC103155071,LOC106941438)


Basic Information

Item Value
gene id mad2l1
gene name mad2l1,LOC102790739,LOC103155071,LOC106941438
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 2664689 ~ 2669131 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821445.1
TCGTTAACGCATGCGCAAAAGTGTGGAGCTAACAAATTTCAAACTGGACGGCGGGTAGTTGAAGCATAGACCGAAAAAAACAAAGGTTCATTGTCACGAATATAGCCAAAAGTGTAAGAAAATGACTAGCACGTTGAAAGGAATTACTCTCAAGGGAAGCGCCGAACTAGTAGCCGAGTTCTTCTCATTTGGCATCAACAGCATCCTGTACCAGCGGGGCATATATCCTCCAGAGACATTCAGCAGGGTCACCAACTATGACATGAGCCTTCAACTTACCACTGATCCCAAACTGAAGAACTACCTGACCAATGTGGTGTCTCAACTCAAAGAGTGGCTGTTTGAGTGCACTGTGCAGAAGCTGGTGTTGGTGATCACATGCCTGGAGACCAACGAGGTGCTGGAGAGATGGCAGTTTGACATCGAGTGTGACAAATCAGCCAAGGAGAGCAGTGCTCCCAGAGAGAAGTCCATTAAGACCATTCAGGATGAGATCCGCTCAGTTATCAGACAGATAACAGCCACCGTTACTTTCCTGCCGCTGCTGGAGACGCCATGTGCATTTGACCTCCTTGTCTACACAGACAAAGACCTGGTAGTTCCTGATAAGTGGGAGGAGTCCGGGCCGCAGATCATCGACCAATCGGAGGAGGTGCGTTTACGCTCCTTCACCACCTCTATCCACAAGGTGAACAGCATGGTGGCGTACAAGAAGACGGACTCAGTTTAGATGTAAAccaggcccccccccccaccctatGAGCTGTATATACAACCAAGCGCTGCCCCTTTATAGAGTAGGTTTTACAGTGCCCTGTCCTACCTCACTGTCTGCATCTCTGTCCAGTATTCTAAACTTCACTTTGTCTCACTTGTCTTTTTGACGACTGTGTGACAGCAACCTTCTCTGTCTACACTGATGTAAATATTTCTCATAAGCAGTGATTTGTCTATTAGGACAACTGTTTTCTTTagtattttttcctctttctctcaagTTGTCAACCTCTGTTTTAGAAGCTAGTGGTTTATATGTTAAACTTTTATAAAATGCCATAAATAAATGTCTTTCACTAAG

Function

symbol description
mad2l1 Predicted to be involved in mitotic spindle assembly checkpoint signaling. Predicted to be active in cytoplasm; kinetochore; and nucleoplasm. Is expressed in several structures, including immature eye; nervous system; neural tube; otic vesicle; and proliferative region. Orthologous to human MAD2L1 (mitotic arrest deficient 2 like 1).

NR:

description
PREDICTED: mitotic spindle assembly checkpoint protein MAD2A

GO:

id name namespace
GO:0007094 mitotic spindle assembly checkpoint biological_process

KEGG:

id description
K02537 MAD2; mitotic spindle assembly checkpoint protein MAD2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821445.1 True 1078 mRNA 0.46 5 2664689 2669131

Neighbor

gene id symbol gene type direction distance location
ank2b ank2,LOC103361685,LOC107384730 coding upstream 214447 2278934 ~ 2450242 (+)
LOC120572444 NA coding upstream 454130 2210208 ~ 2210559 (+)
LOC120572142 NA coding upstream 562317 2038970 ~ 2102372 (+)
paqr9 paqr9 coding upstream 922320 1739323 ~ 1742369 (+)
rap1gds1 rap1gds1 coding upstream 1043839 1582729 ~ 1620850 (+)
zcchc4 LOC104953644,LOC104953641 coding downstream 139769 2808900 ~ 2824015 (+)
afap1 afap1 coding downstream 287217 2956348 ~ 3108934 (+)
hacd4 hacd4 coding downstream 487663 3156794 ~ 3167756 (+)
LOC120572274 NA coding downstream 793290 3462421 ~ 3470210 (+)
lrch4 lrch4 coding downstream 1023907 3693038 ~ 3787295 (+)
G140729 NA non-coding upstream 2169 2662272 ~ 2662520 (+)
G140727 NA non-coding upstream 20259 2643948 ~ 2644430 (+)
G140718 NA non-coding upstream 73394 2590928 ~ 2591295 (+)
G140663 LOC103388894,LOC103371184,LOC100695450 non-coding upstream 179642 2481132 ~ 2485047 (+)
G140637 NA non-coding upstream 211043 2452477 ~ 2453646 (+)
G140737 NA non-coding downstream 4235 2673366 ~ 2679063 (+)
G140738 NA non-coding downstream 15388 2684519 ~ 2685155 (+)
G140740 pde5a non-coding downstream 41575 2710706 ~ 2725657 (+)
G140741 NA non-coding downstream 60643 2729774 ~ 2730107 (+)
G140746 NA non-coding downstream 128121 2797252 ~ 2797522 (+)
G140613 NA other upstream 605322 2055439 ~ 2059367 (+)
G140594 NA other upstream 632464 2022592 ~ 2032225 (+)
G140582 NA other upstream 634062 1929623 ~ 2030627 (+)
frem1a frem1,LOC106908230,LOC105925506,LOC101079287,LOC108244244 other upstream 939221 1677210 ~ 1725468 (+)
LOC120572292 NA other upstream 2041654 621116 ~ 623035 (+)
ablim2 ablim2 other downstream 158921 2828052 ~ 2954690 (+)
mllt3 mllt3 other downstream 587382 3256513 ~ 3433803 (+)
zgc:112271 LOC103361642,LOC104959592,LOC100706616,LOC104935668 other downstream 1644020 4313151 ~ 4315545 (+)
G141060 men1 other downstream 1771507 4440638 ~ 4444947 (+)
G141063 NA other downstream 1814561 4483692 ~ 4487607 (+)

Expression


Co-expression Network