G140663 (LOC103388894,LOC103371184,LOC100695450)


Basic Information

Item Value
gene id G140663
gene name LOC103388894,LOC103371184,LOC100695450
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 2481132 ~ 2485047 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189732
ataaaatactgtattttgCATATTTGATGAGAGGACACAtctgttttgcacagtttatataaaaaaaatgaatattcttcagtcatttgtctgcagctcattctcTTAAAAGAATCAAGAAAATCGTATTGTGAACTTGAAATCATATTGAACTGGGAGTTGAGTGTATTTTTAGATCCCTAATATGCCATACTGAGTATGCTTCCATAGTAGCAGCAACTTCTGGTCTTTTGCGTGTTCCGTAAGCAATATGGCCACCAAAGGATGCACTGTGTCAGCTAAGAACCTGTtactgatgcttttttttttagacttgaCATGCCTAAGTACCAAACCTGGTAGTGTAGTGTGACACTGGGAAGAAGAGCCAAATGCACCAAGAACTCTTACCTTACACAGGAGTTACCACACAAGAGCGggaaggaagaaaaacaaaagtcaaTAAGGTCACTGACATAATACTGCCAACTGAGAAAATCTATGCGAATAAACCAAATGTAATCGTGACTGTCATTTGTCATGAAGAGACAAATCAATAATGTTTGACTCAGTTGAAACACTTTGCCCTTTACAAGGGACCTGAAGAGGGGATTGCATCGATCTGTGTGGTCATTCAGTCTCTGTTGATAGCAACTGAAAAGGGAGGCCCGGTGGAGCTTTTGGGCTCAAGGCCATGggaattgaaagaaaaaaaaaagtggatttcAAAAGAGCAGCATGTAAAACAATACCTAAAAATACACAATGAAGACAGAGTTAGGAGGTGTCAAGAAAACAATCTCTCTTCAGTAATGATATTTGCACCTAGAAGGACAGCATGTCTTACAAGGGAACAGTATTTCAAGCATCAATCTTCACTGGTTCTGTCCTACCTGAGAAGTTGCGAGTGGCCAGCATAGTAGTCAGGATAGCACCCTTGAGTTTCCTTCTAGCGTTGAATTTCTTCAGGCACTCCACAGTCTCCTGTCTGTGCATCATGGACGCCACAGTGGAGCGTTGGCAGATCCAGGGGTGTTTGAGTGCATCTGTGGCAGTCACTCTCTTGGCTGGATTGATGGTCAGCATCTTGTTGATCAGGTCTTTGGCCTCTGGAGTCACTGTGTCCCAC

Function

NR:

description
PREDICTED: calcium/calmodulin-dependent protein kinase type II delta 1 chain isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189732 True 1108 lncRNA 0.42 3 2481132 2485047

Neighbor

gene id symbol gene type direction distance location
ank2b ank2,LOC103361685,LOC107384730 coding upstream 30890 2278934 ~ 2450242 (+)
LOC120572444 NA coding upstream 270573 2210208 ~ 2210559 (+)
LOC120572142 NA coding upstream 378760 2038970 ~ 2102372 (+)
paqr9 paqr9 coding upstream 738763 1739323 ~ 1742369 (+)
rap1gds1 rap1gds1 coding upstream 860282 1582729 ~ 1620850 (+)
mad2l1 mad2l1,LOC102790739,LOC103155071,LOC106941438 coding downstream 179642 2664689 ~ 2669131 (+)
zcchc4 LOC104953644,LOC104953641 coding downstream 323853 2808900 ~ 2824015 (+)
afap1 afap1 coding downstream 471301 2956348 ~ 3108934 (+)
hacd4 hacd4 coding downstream 671747 3156794 ~ 3167756 (+)
LOC120572274 NA coding downstream 977374 3462421 ~ 3470210 (+)
G140637 NA non-coding upstream 27486 2452477 ~ 2453646 (+)
G140650 NA non-coding upstream 145572 2334954 ~ 2335560 (+)
LOC120572447 NA non-coding upstream 185418 2294741 ~ 2295714 (+)
G140640 NA non-coding upstream 266970 2166236 ~ 2214162 (+)
G140635 NA non-coding upstream 326367 2154364 ~ 2154765 (+)
G140718 NA non-coding downstream 105881 2590928 ~ 2591295 (+)
G140727 NA non-coding downstream 158901 2643948 ~ 2644430 (+)
G140729 NA non-coding downstream 177225 2662272 ~ 2662520 (+)
G140737 NA non-coding downstream 188319 2673366 ~ 2679063 (+)
G140738 NA non-coding downstream 199472 2684519 ~ 2685155 (+)
G140613 NA other upstream 421765 2055439 ~ 2059367 (+)
G140594 NA other upstream 448907 2022592 ~ 2032225 (+)
G140582 NA other upstream 450505 1929623 ~ 2030627 (+)
frem1a frem1,LOC106908230,LOC105925506,LOC101079287,LOC108244244 other upstream 755664 1677210 ~ 1725468 (+)
LOC120572292 NA other upstream 1858097 621116 ~ 623035 (+)
ablim2 ablim2 other downstream 343005 2828052 ~ 2954690 (+)
mllt3 mllt3 other downstream 771466 3256513 ~ 3433803 (+)
zgc:112271 LOC103361642,LOC104959592,LOC100706616,LOC104935668 other downstream 1828104 4313151 ~ 4315545 (+)
G141060 men1 other downstream 1955591 4440638 ~ 4444947 (+)
G141063 NA other downstream 1998645 4483692 ~ 4487607 (+)

Expression


Co-expression Network