chrnb1l (LOC101463714,LOC102292928,LOC102798105)


Basic Information

Item Value
gene id chrnb1l
gene name LOC101463714,LOC102292928,LOC102798105
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 9130643 ~ 9153933 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU191788
ATTGAAAGTAACAGCCCTGTCACACACAACAAGAGACGGTGGCTCCGCTTACTCTtcgtctctcctcctccctttctgtgTCTCTTTATCCTGCTACAGAACGAGAAGAACGAAGAAATGACAACCAACGTGTTCATGAATCTGGCGTGGATAGACTACAGGCTGGCGTGGAATCCGGAAGAATATGACGACATTGAAGTTTTGAGGATTCCTCCCAACAAGGTGTGGCGTCCAGACATCTACCTCATAAACAAGTGAGTGTCGTCCCATCTGCAGTCACACAGTCATCCATATCATCC
>XM_039821414.1
GTGGCGAACACCAACAGGTGCCTGCCCCACAGGCTTCCCAGTACAAACACATTCCGCCCTCTCGTCACTCCCAGCATGCGCACCCAATCAGGCCGTGGATTCACCCACGGAGCCACGGCCACACAGACACCAAAGGGACAGGAGAGAGAGCTGAACAGTGTGTGCTGCTAAAGGTGCCAACCAGCTGCAATCCAACTGAAGGTGTACCTGTAGCAAAGGGCTAGAAAGGGGTGTCTTTTTCGGGACGCTCCATCTAGATTCCAGGTGAAGGCGTCAAAGTGCCTAAAGGAAAGTGGGGCCTTTTGATTGCACTTAAAAGTGTACAATGTCATGACTGTCATGATTGGACAAATGAAGATGAGGATGATCATTCATGCGAGGATGAGCGCATTAATCATCGTATGCAGCTGCCTTTGTCTCACTTCTACTGGAGCCTCGGAAACCGAGCGGAGGCTCCATCAGAAGCTGTTTAAGAACTACAACATGAAAGTCCGACCGGCTCGTTACTGGGAGGAGAAGGTGATGGTTCGAGTGGGGATGACCCTCTCTCAGCTTGTCAGCTTGAACGAGAAGAACGAAGAAATGACAACCAACGTGTTCATGAATCTGGCGTGGATAGACTACAGGCTGGCGTGGAATCCGGAAGAATATGACGACATTGAAGTTTTGAGGATTCCTCCCAACAAGGTGTGGCGTCCAGACATCTACCTCATAAACAATAATGACGGTCAGTTCGACGTGGCTCTGTACGTCAACGTCTTGGTTTACAGTGATGGGACAGTCAACTGGCTTCCCCCAGCCATCTACCGCAGCTCCTGCTCTATAGAGGTGTCGTACTTCCCATTTGACTGGCAGAACTGCAGCATGGTTTTCCGCTCGTACACCTATGACGCCTCTGAGGTGGAACTGCAGTACTTTCTGGATGAAGTGGGCAACGAGATCCAGGAGATTGTTATAGATGAGAACGCTTTCACCGAAAACGGAGAATGGGCCATCTGTCACAAACCCTCCAGAAAGAACGTCAAGGAGGACCTTTACGAGGACATCACCTTCTACCTCATCATAGAGAGGAAGCCTCTCTTctacatcatcaacatcatcgtGCCCTGCATCCTCACCAGCGTGTTGGCTATATTTGTCTTCTACCTGCCTCCTGGAGCAGGAGAGAAGATGACTCTCTCCATTTCCGTCCTCATCGCTCTGACTGTCTTCATGCTTCTGCTGGCTGACAAGGTCCCCGAGACCTCCCTCGGCATTCCAATTATTGTCAACTACGTCTTGTTCACCATGATCCTGGTCACGTTCTCGGTCATCCTAAGCGTAGTCGTCCTTAATCTGCACCACCGAACGCCCAGCACACACATCATGCCCAACTGGGTTCGAAAGGTATTCATTCACTTCCTGCCCAAGTACATCGGCATGACAAGGCCAAACCCAGAGGAACCTCTGGTGAAGGAGGAGTCTAGTGAGGACTTGCCCATCCAAAGCTTCAACGGCAGGCAGCCTGGAGGAGAGTACTTCATTCGAAAGATCAACCCTGATCTCGTCTTACCTTGGAGAGGCAGGTGTGAGAGCACAGTGCAGCTCCAGCGGCTCCCAAACACTGACAGCTACTGTCTGGTCCTCCCTCCCAACCTGAAGTCAGCCATCTCTGCAGTGACATACATGGCCGAGCAGCTGAAGAAGCAGGACACAGACGACACGATGACAGGAGACTGGCAGTTCATCGCCCTCGTGGTGGACCGCCTCTTCCTCTGGTTGTTTGTCATCATCACCACCCTGGGCACCCTGGCCATGTTCTTGGACGCCAGTTTCAACTATACGCCCGAGAACCCTTTCCCATAGCAgaccgaacacacacacactcggagTTTGAAGAATTGCTTGGTCGTTAATTCTTGTTATTGGTGATTTCGGAGATCACCGGATCTGACTTTCCATAAATACCTTATTACCTATTCCATATATATCTGTTctctgaaatgttttatttaaggtTAGGTAGCCGATAGTCTCGCATCGCCAGACCTAtccccacagcgctgtggagtaaggtgtggctacaccacagatgcattctgggataggaaaaaaataaaaaaacgctctgggttgtttgcatttcaataaaccaatcacaatcgtcttgggcgttGCTAAGCATTGGTCGAAGAGactgtggctctgcaaaatggtctcaggaaggaacttgtttaggtggaacattagcaccctgcaaaagaaaacgccacacgcTAATAtcaaatgaagttaactgttgacacaacagagtaacgtgagctatttaaattagccggatacatggttaaacctcatcaGCTCTTACCAATGTATCGCAGTgggtattttgtccatagcaaatcccaccaatcggtccctaAACGTCCCATTTAGAGAGGAAATGGCGTAGTCatattctttttaaatctttacaatcattccctgaaagaaccaagcaggcctgtcttgttgcacgatccaatttttcttcaaaacttgccatttttagcgtgtagtttgctagctcgaagtttgttgagTTTTGACCTGCTGGATGTTACGGAGATTATCCAGTAAATGATATCCAGTCGTCGATCCAGACTAGGTAGCAGAAGAAAACACGTCATATTTGCATAAAGTAGAACCATGTACACGTACAGTGCCTGaattggaccaaaaaaaaagtgCCAGTATAATTCAGCAGTTGCTTGACATAACCATGTGTcttggatatatttatattcatacGTATATCTTGTAGGGGTGACCCCAGAATAGTCTATTTTATCTAAGGAGCCTGATTTGACTGCCAATCTCTCAGTCGAATCGTCGcagtgtgtaaaaaaataaataaatggggtTATGAAACAAAGCATCATTCCATTCAGGCTATATGGGGGTGCTGGATGTTTGATTTTACATAGAACTGCTTGGTTTCTTCCAATAAATCatgatgtgtttgtgtaaatATAAGCCATAGACCAGGGGCGTCAAACATACAGCCCGTGGGCCAGAACGGGCCCGCTAAAGGAtccaatcaggcccactggatgactttgcaaagtgtgaTAATTGAAAAGAAGTAATTCATTCCAATTTTCCTTTCATCTCAGAAAATATCCAGGTTCTTTTTCTGTAAATGTacgactttaatctcagaaatTCGGAGTTCTTCTCTCGGAATATTACCCCTCTACGTTcagtaacattttttttctttctacggTGGCCTTAAACGCTGTCAGAAGCAAACAGAATCTCTGTGGCCGATATttttggaatatatatatatatatgtgtgtgtatagccATACAGCCTATGAGATAAGCCTATCAATAATACTGTTGATATCAAATAGAAATAAGGGTACTTATGTGGACAAAAATCCGTTGCCGGTACTCCGTGCTGGGGAGTACTGGCCCATTTCAGGCACTGATGTACACACAACCTACATGATAAAAGAATCCATGTATAGATTTTTTTAGAAGGTACATATGTGGGAACACTCACTGGTTTTGCATTCTTTTTTGTCTAAATCATGTATTTAACACATTGTGATATCCATTATTTGAGTCTAAAagcttgaaatacatttttctctAACGCGA

Function

NR:

description
PREDICTED: acetylcholine receptor subunit beta-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191788 False 299 lncRNA 0.48 2 9148746 9149435
XM_039821414.1 True 3630 mRNA 0.46 11 9130643 9153933

Neighbor

gene id symbol gene type direction distance location
cldn7a LOC104942886,LOC103374259,LOC104930852,LOC101477346,LOC103391400,LOC107095366 coding downstream 8984 9111390 ~ 9121659 (-)
LOC120572315 NA coding downstream 100283 9022932 ~ 9030360 (-)
LOC120573560 NA coding downstream 109866 8991620 ~ 9020777 (-)
LOC120572423 NA coding downstream 129685 8998470 ~ 9000958 (-)
si:dkey-165a24.9 LOC104942883,LOC102291186,LOC101474743,LOC102082907 coding downstream 142405 8985251 ~ 8988238 (-)
chrnb1 chrnb1,LOC103358387 coding upstream 6469 9160402 ~ 9193336 (-)
fgf11a fgf11,LOC103358388,LOC101075493 coding upstream 51291 9205224 ~ 9353768 (-)
tmem102 LOC103358389,LOC101478184,LOC107084115 coding upstream 267694 9421627 ~ 9443291 (-)
LOC120573623 NA coding upstream 540573 9694506 ~ 9730233 (-)
LOC120573624 NA coding upstream 540573 9694506 ~ 9704699 (-)
G142187 NA non-coding downstream 4409 9126018 ~ 9126234 (-)
G142186 NA non-coding downstream 4734 9125624 ~ 9125909 (-)
G142183 NA non-coding downstream 6551 9123560 ~ 9124092 (-)
G142182 NA non-coding downstream 7391 9122599 ~ 9123252 (-)
G142143 NA non-coding downstream 230968 8871087 ~ 8899675 (-)
G142215 NA non-coding upstream 43869 9197802 ~ 9205205 (-)
G142221 NA non-coding upstream 74606 9228539 ~ 9228859 (-)
G142226 NA non-coding upstream 172109 9326042 ~ 9326267 (-)
G142227 NA non-coding upstream 182207 9336140 ~ 9336520 (-)
G142228 NA non-coding upstream 182643 9336576 ~ 9336856 (-)
LOC120572236 LOC102083041 other downstream 25412 9032947 ~ 9105231 (-)
G142173 NA other downstream 30229 9098741 ~ 9100414 (-)
LOC120572366 NA other downstream 586911 8517023 ~ 8543732 (-)
LOC120572370 NA other downstream 606724 8510393 ~ 8523919 (-)
G142077 NA other downstream 665031 8465082 ~ 8465612 (-)
tmem256 tmem256,LOC103358394 other upstream 303917 9457850 ~ 9465779 (-)
si:dkey-183c6.7 LOC103364800,LOC108242893,LOC102223112,LOC106525003,LOC106907808,LOC106948277,LOC103480784,LOC103131169 other upstream 1477542 10631475 ~ 10657973 (-)
G142669 NA other upstream 1776089 10930022 ~ 11144738 (-)
gpha2 gpha2 other upstream 1995918 11149851 ~ 11154529 (-)
G142745 NA other upstream 2288028 11441961 ~ 11443939 (-)

Expression


Co-expression Network