fgf11a (fgf11,LOC103358388,LOC101075493)


Basic Information

Item Value
gene id fgf11a
gene name fgf11,LOC103358388,LOC101075493
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 9205224 ~ 9353768 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822930.1
CTCAGCTCTGCACCCCTCCCTCAGCGGTGCTCCGTCGCCCTGGGTGAGCGGGCAGGGGGGTGGCCCACGGTACCCCCCGACACCTGGGCGCCACCAAGCCGCCCGTGGCCGGTGAGGTGGCGGCAGGGTCAGCGCTGGGAAGATGGCCGCTCTCGCCAGCTCCCTCATTCGCCAGCGCAGGGAGGTCAAGGACCCCCAGGCAAACCGGCAGATCGCCAGCAAGCGCAAGCCCTGCCCAAAGAGCAACAAGTCGCTCTGCCAGAAGCAGATCCTCATACTGATATCGAAGGTTCGGCTATGTGGCAGTCGAGggagaaaaatggaaaaaagacCAGAGCCCCAGCTGAAGGGCATCGTCACGCGGCTTTACTGCAGACACGGCTTCTACCTCCAGATGCTGCCGGATGGCACCATGGAAGGCACAAAGGACGAAAGCAGCTCCTTCTtgcAGTTCAACTTGATTCCTGTGGGGCTCAGGATAGTGGCCATCCAGAGCACCAAGACGGGGCTCTACGTTGCCATGAACAGCGAGGGCTACCTCTACACTTCGGAACACTTCACGCCCGAGTGTAAGTTTAAGGAGAGCGTGTTTGAGAACTACTACGTCACCTACTCCTCCATCCTGTACAGACAGACCCAGTCGGGTCGGGCGTGGTACATCGGCATCAACCGAGATGGACAGGTCATGAAAGGGAACCGTGTCAAGAAGACGAAGGGAGCAGCACACTTCCTGCCCAAACTCATTGAAGTGGCCATGTACCGGGAGCCCTCTCTACACGACGTTGCCGAGCAGAGTCCGCCCAGGAAAACGCCCAAGACCTCCAGTGAGTCGCCCGTGCTCCAGAACGGCAAGAAGGTCCCAAaatccaaaaccaaaacaacgtCCTAGCGCTTAGAGACGCaggtggggaggggggagggggggggggaggagaggacTCGGCGGACACCTGAACACGGTTGTTAGGGCTACCCTATACTGGCGACACTGACCCCCTTGAGAACTATGCGTACCACAATGCAGTGGTGTAAagttggaggaaaaaaaaaaaggagcagatCCGGGAAGAGtgaagctcacacacacacacacacacacacacacacacacacacacacacaccagcccaTCCACCTTCTTATTGGATTGTGATTATCAAAGCCTGGGATATAAAAGCAATAACTCCACGAAGAGTATAGCATGTCAGCGCAGCGTGTTTGACCTGCTGGAAAGGAAGTcccacacacaccctctggccATCTTCAGCGACATCCTTCCAGCCGACCACATGTCCTAGCAAAAAGTCTTCCTGGTTCTACCACCAACGGGTGCAACGGTCAACTCGGTCCCTCTGCAGCGCACGCTCTACAAATGgggttgggttttttttttcgtttccCCCACAGGGCTCCGTGCTAATGTTAGCCGCACACGAAGCCATGCTGAAGCGAGGCTGTCACAGAGACCCTTGCAGACTTTTTGTTCTGCAGCCATCTGCTCAGTCCACatcttctgtgtgtgtcagcgACTTTGTGTGATGGCCTAGATACTTgtcagccctgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcgttcgtGTTCCCTTCTTCTTCGATCCACCTTTGGTGCGATTTGATTAGTTTGCGACATGGACTCAATTTTCCACTCGGCAGCACAAGAAAACCCCTCCCGTCCTCCCTGGCTCTGTTAATGGAGTCTGGGGCTGATCAGAATCTTTCGACCCTTAAACGAGGGGCCAAGAGCTCCCTCGACACAAtgcataaccacacacacacacacacacactcattattACACTGACATTTACGCACACACGCGAAGGTGTGTACGTAAATGCGCACACACTTTGGCATCCCGAGATCCATGAGCAACAACGGCAGAAAATGTCTCTCGCAACTTAACGCACTTAACATAAtgacacacattaacacacacacgcacacacacactcgcaaatgcacacagacacacacacacacacgctgacgTGGtggtggtgagtgtgtgtgcaggttGTGGGAGAGGATGAGGAAATCATCAGCGTGATGGGGTACTGATGGAGCCTGACGGTGTAGCTTGTGATTGCACTGCAAGAGCTGTTCTTACTGTGGCTGGCCAAGCATTGCACAAACCCCCCCAACCCCTAACCCCCGAGGCCCGCACATCATCTGTGGACCCTCTATCACTCAATGTGCTATTCTCgtctaaaaacacaaaaaaactcaaattcTTTTTAATTGCTACCCCGTCGCTGTCCCCATGCCATAAATATTCCGTGTAATGTATGTACTTAAGACGGTTACCctagtgacatcacttgagtaATGTTGCGTTTGGATTGGAGACTTTGAAGTCTAACAGAAAAATGCAATGCAAACTGGAGGTGTGGAGTACAGCAACACAAAGGCCTAAAACTAAGCCCAAAACCTGGGGCCATACCGGCATCTTCGAGACACGACGTGACCCCCGCTGGTACTGCCAGTTGGGCACCCTAAAGCCGTGGCTTTGCTCGATTTAATTCACTAGTCCAGTGCCCGTTGgaaacgggccgattgcttggcctgtggtgttgctTGCAGCTTTCTTAAGAACCGCTCATCGAGATTTTTACACTTGGCGCTGCGCAACACACCTGCCATGACATAGTTGCGTCACACGCCCAGGTAACGTAGCTGAGGTATTCATTCACAATGTacagtttaataataaataaataaaatgtatgaataAAATATTATAAAGTACTATGAATTATATTACCAGCAATatcatctattttttttttttttttttttttttgttccaggCAATCCTCCTTTCCTCGGGCCAACATTAACCACAATGCAACTCGGCCACCGATCAGTTTAGTTGCAGATTCTGCTGTGTTAATGCTAGtagagcagagatgaggagcgggCTGCGGAGGTTTAGTGACCTCCCTTCTTTCTGACTCCACACCCCCAGATttcttccatttaaaaaaaaaaaaaaaaaaaaaa
>XM_039822932.1
CTCAGAGAGACGCCCACTTCCCCGCTGGctgtgctagctagctagaggcTAGCTAAACTAGCTACACGTTAGCCGAGAGTACAAATaatctgcagttttttttccgCTGTGTGCTGCACGCGAACGGAGTTTTTTGTGCTTTACATCGGCCAAAGACAAGACCCACCCGAGGAACCGGAGCGGTGGCGAGAAGAAGCTACGTGGGCTCCGTGAGGACTAAAGATGTGGACATTGAGGCTGTAACGGTGTTCTTCTGTGACCAAGCCCCAGCTGAAGGGCATCGTCACGCGGCTTTACTGCAGACACGGCTTCTACCTCCAGATGCTGCCGGATGGCACCATGGAAGGCACAAAGGACGAAAGCAGCTCCTTCTtgcAGTTCAACTTGATTCCTGTGGGGCTCAGGATAGTGGCCATCCAGAGCACCAAGACGGGGCTCTACGTTGCCATGAACAGCGAGGGCTACCTCTACACTTCGGAACACTTCACGCCCGAGTGTAAGTTTAAGGAGAGCGTGTTTGAGAACTACTACGTCACCTACTCCTCCATCCTGTACAGACAGACCCAGTCGGGTCGGGCGTGGTACATCGGCATCAACCGAGATGGACAGGTCATGAAAGGGAACCGTGTCAAGAAGACGAAGGGAGCAGCACACTTCCTGCCCAAACTCATTGAAGTGGCCATGTACCGGGAGCCCTCTCTACACGACGTTGCCGAGCAGAGTCCGCCCAGGAAAACGCCCAAGACCTCCAGTGAGTCGCCCGTGCTCCAGAACGGCAAGAAGGTCCCAAaatccaaaaccaaaacaacgtCCTAGCGCTTAGAGACGCaggtggggaggggggagggggggggggaggagaggacTCGGCGGACACCTGAACACGGTTGTTAGGGCTACCCTATACTGGCGACACTGACCCCCTTGAGAACTATGCGTACCACAATGCAGTGGTGTAAagttggaggaaaaaaaaaaaggagcagatCCGGGAAGAGtgaagctcacacacacacacacacacacacacacacacacacacacacacaccagcccaTCCACCTTCTTATTGGATTGTGATTATCAAAGCCTGGGATATAAAAGCAATAACTCCACGAAGAGTATAGCATGTCAGCGCAGCGTGTTTGACCTGCTGGAAAGGAAGTcccacacacaccctctggccATCTTCAGCGACATCCTTCCAGCCGACCACATGTCCTAGCAAAAAGTCTTCCTGGTTCTACCACCAACGGGTGCAACGGTCAACTCGGTCCCTCTGCAGCGCACGCTCTACAAATGgggttgggttttttttttcgtttccCCCACAGGGCTCCGTGCTAATGTTAGCCGCACACGAAGCCATGCTGAAGCGAGGCTGTCACAGAGACCCTTGCAGACTTTTTGTTCTGCAGCCATCTGCTCAGTCCACatcttctgtgtgtgtcagcgACTTTGTGTGATGGCCTAGATACTTgtcagccctgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcgttcgtGTTCCCTTCTTCTTCGATCCACCTTTGGTGCGATTTGATTAGTTTGCGACATGGACTCAATTTTCCACTCGGCAGCACAAGAAAACCCCTCCCGTCCTCCCTGGCTCTGTTAATGGAGTCTGGGGCTGATCAGAATCTTTCGACCCTTAAACGAGGGGCCAAGAGCTCCCTCGACACAAtgcataaccacacacacacacacacacactcattattACACTGACATTTACGCACACACGCGAAGGTGTGTACGTAAATGCGCACACACTTTGGCATCCCGAGATCCATGAGCAACAACGGCAGAAAATGTCTCTCGCAACTTAACGCACTTAACATAAtgacacacattaacacacacacgcacacacacactcgcaaatgcacacagacacacacacacacacgctgacgTGGtggtggtgagtgtgtgtgcaggttGTGGGAGAGGATGAGGAAATCATCAGCGTGATGGGGTACTGATGGAGCCTGACGGTGTAGCTTGTGATTGCACTGCAAGAGCTGTTCTTACTGTGGCTGGCCAAGCATTGCACAAACCCCCCCAACCCCTAACCCCCGAGGCCCGCACATCATCTGTGGACCCTCTATCACTCAATGTGCTATTCTCgtctaaaaacacaaaaaaactcaaattcTTTTTAATTGCTACCCCGTCGCTGTCCCCATGCCATAAATATTCCGTGTAATGTATGTACTTAAGACGGTTACCctagtgacatcacttgagtaATGTTGCGTTTGGATTGGAGACTTTGAAGTCTAACAGAAAAATGCAATGCAAACTGGAGGTGTGGAGTACAGCAACACAAAGGCCTAAAACTAAGCCCAAAACCTGGGGCCATACCGGCATCTTCGAGACACGACGTGACCCCCGCTGGTACTGCCAGTTGGGCACCCTAAAGCCGTGGCTTTGCTCGATTTAATTCACTAGTCCAGTGCCCGTTGgaaacgggccgattgcttggcctgtggtgttgctTGCAGCTTTCTTAAGAACCGCTCATCGAGATTTTTACACTTGGCGCTGCGCAACACACCTGCCATGACATAGTTGCGTCACACGCCCAGGTAACGTAGCTGAGGTATTCATTCACAATGTacagtttaataataaataaataaaatgtatgaataAAATATTATAAAGTACTATGAATTATATTACCAGCAATatcatctattttttttttttttttttttttttgttccaggCAATCCTCCTTTCCTCGGGCCAACATTAACCACAATGCAACTCGGCCACCGATCAGTTTAGTTGCAGATTCTGCTGTGTTAATGCTAGtagagcagagatgaggagcgggCTGCGGAGGTTTAGTGACCTCCCTTCTTTCTGACTCCACACCCCCAGATttcttccatttaaaaaaaaaaaaaaaaaaaaaa

Function

symbol description
fgf11 Predicted to enable sodium channel regulator activity. Predicted to be involved in regulation of voltage-gated sodium channel activity. Predicted to be located in extracellular region. Predicted to be active in cytoplasm and nucleus.

NR:

description
PREDICTED: fibroblast growth factor 11-like

GO:

id name namespace
GO:0008083 growth factor activity molecular_function

KEGG:

id description
K22413 FGF11_12_13, FHF3_1_2; fibroblast growth factor 11/12/13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822930.1 True 3058 mRNA 0.51 5 9205224 9336107
XM_039822932.1 False 2985 mRNA 0.50 6 9205224 9353768

Neighbor

gene id symbol gene type direction distance location
chrnb1 chrnb1,LOC103358387 coding downstream 11888 9160402 ~ 9193336 (-)
cldn7a LOC104942886,LOC103374259,LOC104930852,LOC101477346,LOC103391400,LOC107095366 coding downstream 83565 9111390 ~ 9121659 (-)
LOC120572315 NA coding downstream 174864 9022932 ~ 9030360 (-)
LOC120573560 NA coding downstream 184447 8991620 ~ 9020777 (-)
LOC120572423 NA coding downstream 204266 8998470 ~ 9000958 (-)
tmem102 LOC103358389,LOC101478184,LOC107084115 coding upstream 67859 9421627 ~ 9443291 (-)
LOC120573623 NA coding upstream 340738 9694506 ~ 9730233 (-)
LOC120573624 NA coding upstream 340738 9694506 ~ 9704699 (-)
LOC120573625 NA coding upstream 371529 9725297 ~ 9735359 (-)
epoa epo coding upstream 388086 9741854 ~ 9749550 (-)
G142215 NA non-coding downstream 19 9197802 ~ 9205205 (-)
G142187 NA non-coding downstream 78990 9126018 ~ 9126234 (-)
G142186 NA non-coding downstream 79315 9125624 ~ 9125909 (-)
G142183 NA non-coding downstream 81132 9123560 ~ 9124092 (-)
G142182 NA non-coding downstream 81972 9122599 ~ 9123252 (-)
G142250 NA non-coding upstream 63069 9416837 ~ 9418302 (-)
G142251 NA non-coding upstream 66772 9420540 ~ 9421003 (-)
G142255 NA non-coding upstream 97265 9451033 ~ 9451925 (-)
G142258 NA non-coding upstream 103126 9456894 ~ 9457414 (-)
G142302 NA non-coding upstream 444563 9798331 ~ 9809775 (-)
chrnb1l LOC101463714,LOC102292928,LOC102798105 other downstream 51291 9130643 ~ 9153933 (-)
LOC120572236 LOC102083041 other downstream 99993 9032947 ~ 9105231 (-)
G142173 NA other downstream 104810 9098741 ~ 9100414 (-)
LOC120572366 NA other downstream 661492 8517023 ~ 8543732 (-)
LOC120572370 NA other downstream 681305 8510393 ~ 8523919 (-)
tmem256 tmem256,LOC103358394 other upstream 104082 9457850 ~ 9465779 (-)
si:dkey-183c6.7 LOC103364800,LOC108242893,LOC102223112,LOC106525003,LOC106907808,LOC106948277,LOC103480784,LOC103131169 other upstream 1277707 10631475 ~ 10657973 (-)
G142669 NA other upstream 1576254 10930022 ~ 11144738 (-)
gpha2 gpha2 other upstream 1796083 11149851 ~ 11154529 (-)
G142745 NA other upstream 2088193 11441961 ~ 11443939 (-)

Expression


Co-expression Network