RNA id: XM_039822932.1


Basic Information

Item Value
RNA id XM_039822932.1
length 2985
RNA type mRNA
GC content 0.50
exon number 6
gene id fgf11a
representative False

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 9205224 ~ 9353768 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CTCAGAGAGACGCCCACTTCCCCGCTGGctgtgctagctagctagaggcTAGCTAAACTAGCTACACGTTAGCCGAGAGTACAAATaatctgcagttttttttccgCTGTGTGCTGCACGCGAACGGAGTTTTTTGTGCTTTACATCGGCCAAAGACAAGACCCACCCGAGGAACCGGAGCGGTGGCGAGAAGAAGCTACGTGGGCTCCGTGAGGACTAAAGATGTGGACATTGAGGCTGTAACGGTGTTCTTCTGTGACCAAGCCCCAGCTGAAGGGCATCGTCACGCGGCTTTACTGCAGACACGGCTTCTACCTCCAGATGCTGCCGGATGGCACCATGGAAGGCACAAAGGACGAAAGCAGCTCCTTCTtgcAGTTCAACTTGATTCCTGTGGGGCTCAGGATAGTGGCCATCCAGAGCACCAAGACGGGGCTCTACGTTGCCATGAACAGCGAGGGCTACCTCTACACTTCGGAACACTTCACGCCCGAGTGTAAGTTTAAGGAGAGCGTGTTTGAGAACTACTACGTCACCTACTCCTCCATCCTGTACAGACAGACCCAGTCGGGTCGGGCGTGGTACATCGGCATCAACCGAGATGGACAGGTCATGAAAGGGAACCGTGTCAAGAAGACGAAGGGAGCAGCACACTTCCTGCCCAAACTCATTGAAGTGGCCATGTACCGGGAGCCCTCTCTACACGACGTTGCCGAGCAGAGTCCGCCCAGGAAAACGCCCAAGACCTCCAGTGAGTCGCCCGTGCTCCAGAACGGCAAGAAGGTCCCAAaatccaaaaccaaaacaacgtCCTAGCGCTTAGAGACGCaggtggggaggggggagggggggggggaggagaggacTCGGCGGACACCTGAACACGGTTGTTAGGGCTACCCTATACTGGCGACACTGACCCCCTTGAGAACTATGCGTACCACAATGCAGTGGTGTAAagttggaggaaaaaaaaaaaggagcagatCCGGGAAGAGtgaagctcacacacacacacacacacacacacacacacacacacacacacaccagcccaTCCACCTTCTTATTGGATTGTGATTATCAAAGCCTGGGATATAAAAGCAATAACTCCACGAAGAGTATAGCATGTCAGCGCAGCGTGTTTGACCTGCTGGAAAGGAAGTcccacacacaccctctggccATCTTCAGCGACATCCTTCCAGCCGACCACATGTCCTAGCAAAAAGTCTTCCTGGTTCTACCACCAACGGGTGCAACGGTCAACTCGGTCCCTCTGCAGCGCACGCTCTACAAATGgggttgggttttttttttcgtttccCCCACAGGGCTCCGTGCTAATGTTAGCCGCACACGAAGCCATGCTGAAGCGAGGCTGTCACAGAGACCCTTGCAGACTTTTTGTTCTGCAGCCATCTGCTCAGTCCACatcttctgtgtgtgtcagcgACTTTGTGTGATGGCCTAGATACTTgtcagccctgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcgttcgtGTTCCCTTCTTCTTCGATCCACCTTTGGTGCGATTTGATTAGTTTGCGACATGGACTCAATTTTCCACTCGGCAGCACAAGAAAACCCCTCCCGTCCTCCCTGGCTCTGTTAATGGAGTCTGGGGCTGATCAGAATCTTTCGACCCTTAAACGAGGGGCCAAGAGCTCCCTCGACACAAtgcataaccacacacacacacacacacactcattattACACTGACATTTACGCACACACGCGAAGGTGTGTACGTAAATGCGCACACACTTTGGCATCCCGAGATCCATGAGCAACAACGGCAGAAAATGTCTCTCGCAACTTAACGCACTTAACATAAtgacacacattaacacacacacgcacacacacactcgcaaatgcacacagacacacacacacacacgctgacgTGGtggtggtgagtgtgtgtgcaggttGTGGGAGAGGATGAGGAAATCATCAGCGTGATGGGGTACTGATGGAGCCTGACGGTGTAGCTTGTGATTGCACTGCAAGAGCTGTTCTTACTGTGGCTGGCCAAGCATTGCACAAACCCCCCCAACCCCTAACCCCCGAGGCCCGCACATCATCTGTGGACCCTCTATCACTCAATGTGCTATTCTCgtctaaaaacacaaaaaaactcaaattcTTTTTAATTGCTACCCCGTCGCTGTCCCCATGCCATAAATATTCCGTGTAATGTATGTACTTAAGACGGTTACCctagtgacatcacttgagtaATGTTGCGTTTGGATTGGAGACTTTGAAGTCTAACAGAAAAATGCAATGCAAACTGGAGGTGTGGAGTACAGCAACACAAAGGCCTAAAACTAAGCCCAAAACCTGGGGCCATACCGGCATCTTCGAGACACGACGTGACCCCCGCTGGTACTGCCAGTTGGGCACCCTAAAGCCGTGGCTTTGCTCGATTTAATTCACTAGTCCAGTGCCCGTTGgaaacgggccgattgcttggcctgtggtgttgctTGCAGCTTTCTTAAGAACCGCTCATCGAGATTTTTACACTTGGCGCTGCGCAACACACCTGCCATGACATAGTTGCGTCACACGCCCAGGTAACGTAGCTGAGGTATTCATTCACAATGTacagtttaataataaataaataaaatgtatgaataAAATATTATAAAGTACTATGAATTATATTACCAGCAATatcatctattttttttttttttttttttttttgttccaggCAATCCTCCTTTCCTCGGGCCAACATTAACCACAATGCAACTCGGCCACCGATCAGTTTAGTTGCAGATTCTGCTGTGTTAATGCTAGtagagcagagatgaggagcgggCTGCGGAGGTTTAGTGACCTCCCTTCTTTCTGACTCCACACCCCCAGATttcttccatttaaaaaaaaaaaaaaaaaaaaaa

Function

GO:

id name namespace
GO:0008083 growth factor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU191812 lncRNA downstream 19 9197802 ~ 9205205 (-) True G142215
TU191788 lncRNA downstream 55789 9148746 ~ 9149435 (-) False chrnb1l
TU191782 lncRNA downstream 78990 9126018 ~ 9126234 (-) True G142187
TU191781 lncRNA downstream 79315 9125624 ~ 9125909 (-) True G142186
TU191778 lncRNA downstream 81132 9123560 ~ 9124092 (-) True G142183
TU191850 lncRNA upstream 63069 9416837 ~ 9418302 (-) True G142250
TU191851 lncRNA upstream 66772 9420540 ~ 9421003 (-) True G142251
TU191855 lncRNA upstream 97265 9451033 ~ 9451925 (-) True G142255
TU191858 lncRNA upstream 103126 9456894 ~ 9457414 (-) True G142258
TU191925 lncRNA upstream 444563 9798331 ~ 9809775 (-) True G142302
XM_039823570.1 mRNA downstream 11888 9160402 ~ 9193336 (-) True chrnb1
XM_039821414.1 mRNA downstream 51291 9130643 ~ 9153933 (-) True chrnb1l
XM_039821555.1 mRNA downstream 83565 9111390 ~ 9121659 (-) True cldn7a
XM_039821454.1 mRNA downstream 111031 9035606 ~ 9094193 (-) False LOC120572236
XM_039821453.1 mRNA downstream 111031 9035606 ~ 9094193 (-) False LOC120572236
XM_039822500.1 mRNA upstream 67859 9421627 ~ 9443291 (-) False tmem102
XM_039822501.1 mRNA upstream 67859 9421627 ~ 9442928 (-) False tmem102
XM_039822502.1 mRNA upstream 67859 9421627 ~ 9442628 (-) True tmem102
XM_039822504.1 mRNA upstream 104082 9457850 ~ 9465779 (-) True tmem256
XM_039823456.1 mRNA upstream 340738 9694506 ~ 9717327 (-) True LOC120573623
TU191765 other downstream 104810 9098741 ~ 9100414 (-) True G142173
TU191762 other downstream 111020 9032947 ~ 9094204 (-) True LOC120572236
XR_005641406.1 other downstream 111031 9040965 ~ 9094193 (-) False LOC120572236
TU191658 other downstream 663681 8517023 ~ 8541543 (-) False LOC120572366
TU191853 other upstream 104124 9457892 ~ 9465761 (-) False tmem256
XR_005641765.1 other upstream 1172619 10526387 ~ 10526550 (-) True LOC120573725
XR_005641777.1 other upstream 1175421 10529189 ~ 10529372 (-) True LOC120573737
XR_005641754.1 other upstream 1177916 10531684 ~ 10531847 (-) True LOC120573713
XR_005641776.1 other upstream 1181336 10535104 ~ 10535294 (-) True LOC120573736

Expression Profile