G142250


Basic Information

Item Value
gene id G142250
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 9416837 ~ 9418302 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU191850
CTGGTCCTTTGAAGAGGGAAGATGGGCCTTGCGGGATCTGGACAGCTGCCTTTTCCTGTTGCTGTCTTTCTCtgcctatttttattttctttttttattcccctCTGCCGCTTTCggtctttctctcactctctttcattttctctcactcttaATGTCCCTTTTCattccctcttcctccctcctaccATCCAGATTTCATCCCCCAGGCGTTTGGCCATCTTTCGCACTGAAGGTCCAGGGAAAACAAAAAGCTCCTGAAACTTGGTACCGGTCCAAACTTCTGTTTACACTCCTCACACTGATTGGATTAGGAGCTGTGCAGCCAGTAAATGGTGTAGTGGAGACGACGAGTATATCCAGACAAGCATTCACTTTTCCCCCGTCCGCTTCAATTAGGGCTACGTTTTCTGGGTCTTGCTTGTTTTACCTTAACGAATTGGGAGGCATAAAGTTTTCTCAACACTTACCTGACGGGTGAACTTGGATCTGATGAGGTTTACTAAAATGCCGCTTCCTATGCCGGTGCATAGGCAGGGTGTAAACGCTACAGAGCACACGATTGGTTACAGTTATGCAAGTTTACGTAAATATCACGGTGGTGGTTAATTGTGTTGATTTTGAAGCCGCTTGTGGACTGTTTTTCCTATTTCTCGTATTACAACATCGGCTCTCAACGTCTGGCTCTGTCAATTTGATGTACTTACTactgaatgattttttttttgttgcattttacaGCATGTGTCTGTactggtattgtgtgtgtgtgtgtgtgtgtgtgtgagtgagaattGGAAAACCAAAGGGTTATGTAGAATGTCTAAGCAGGGTGTGTATCCAGCTGCCAGGTGTCAGTTTGtgtttttcagcactttttcatGACAGTCTCAAATAATGTTGTTAACCAAATGGTTTTGAGTAGTGATTAAGAAAATGGTcgcagcatttatttatttattggggAAACATTGTTGATGTGAAGGTACTTTCTCATTGCCTCTGAATGCGTCTCACTTTGTACCTTAATGGGCCTAGTTAGAGATTATATTTGACACTGGAAAACCATCAATGTTTCCTCGAATATCAAATCAATCCTGTATTTTACGATTTCCCTATGGAAAGGCCGACTCTAATTCCAGTATTAAGTGTAGTTGTGAAAGGGCTGGGGGGGAATCGGTATCTGCAGTTTTTGCTGAAActtctgatgatgatgattctgTTTAAGAGTCCGTCAACTTCTGTGGATAAATAACTGACTAAATACGATGAATGTATCCACCGTATCGCTCTAATCTGTTCCCTGCTAAATCGAATTTCTCACGGCTATCTGCGCAGATTCCCTCTGCTCTGCACTCAAGTGCAGAGATAGGAATCTGTACTGAATCACTCCCCAGTTTGAGAAATTGAATTTCATATCTCCTTTATTACTTgagttctttttctttcttttttttaataagtgc

Function

GO:

id name namespace
GO:0030001 metal ion transport biological_process
GO:0006812 cation transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191850 True 1466 lncRNA 0.42 1 9416837 9418302

Neighbor

gene id symbol gene type direction distance location
fgf11a fgf11,LOC103358388,LOC101075493 coding downstream 63069 9205224 ~ 9353768 (-)
chrnb1 chrnb1,LOC103358387 coding downstream 223501 9160402 ~ 9193336 (-)
cldn7a LOC104942886,LOC103374259,LOC104930852,LOC101477346,LOC103391400,LOC107095366 coding downstream 295178 9111390 ~ 9121659 (-)
LOC120572315 NA coding downstream 386477 9022932 ~ 9030360 (-)
LOC120573560 NA coding downstream 396060 8991620 ~ 9020777 (-)
tmem102 LOC103358389,LOC101478184,LOC107084115 coding upstream 3325 9421627 ~ 9443291 (-)
LOC120573623 NA coding upstream 276204 9694506 ~ 9730233 (-)
LOC120573624 NA coding upstream 276204 9694506 ~ 9704699 (-)
LOC120573625 NA coding upstream 306995 9725297 ~ 9735359 (-)
epoa epo coding upstream 323552 9741854 ~ 9749550 (-)
G142228 NA non-coding downstream 79981 9336576 ~ 9336856 (-)
G142227 NA non-coding downstream 80317 9336140 ~ 9336520 (-)
G142226 NA non-coding downstream 90570 9326042 ~ 9326267 (-)
G142221 NA non-coding downstream 187978 9228539 ~ 9228859 (-)
G142215 NA non-coding downstream 211632 9197802 ~ 9205205 (-)
G142251 NA non-coding upstream 2238 9420540 ~ 9421003 (-)
G142255 NA non-coding upstream 32731 9451033 ~ 9451925 (-)
G142258 NA non-coding upstream 38592 9456894 ~ 9457414 (-)
G142302 NA non-coding upstream 380029 9798331 ~ 9809775 (-)
G142342 NA non-coding upstream 492398 9910700 ~ 9912909 (-)
chrnb1l LOC101463714,LOC102292928,LOC102798105 other downstream 262904 9130643 ~ 9153933 (-)
LOC120572236 LOC102083041 other downstream 311606 9032947 ~ 9105231 (-)
G142173 NA other downstream 316423 9098741 ~ 9100414 (-)
LOC120572366 NA other downstream 873105 8517023 ~ 8543732 (-)
LOC120572370 NA other downstream 892918 8510393 ~ 8523919 (-)
tmem256 tmem256,LOC103358394 other upstream 39548 9457850 ~ 9465779 (-)
si:dkey-183c6.7 LOC103364800,LOC108242893,LOC102223112,LOC106525003,LOC106907808,LOC106948277,LOC103480784,LOC103131169 other upstream 1213173 10631475 ~ 10657973 (-)
G142669 NA other upstream 1511720 10930022 ~ 11144738 (-)
gpha2 gpha2 other upstream 1731549 11149851 ~ 11154529 (-)
G142745 NA other upstream 2023659 11441961 ~ 11443939 (-)

Expression


Co-expression Network