RNA id: TU191778



Basic Information


Item Value
RNA id TU191778
length 533
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G142183
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 9123560 ~ 9124092 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CCTCAATCTCCTCCAGGACTCCCACACTCTCTCCTTCAGCCTCTCTGAGGTGCTGAGCTGAAGGGAGAATATATCGACGActtttcatttccaggattgctccggtgccgtcGGAAATTCTGCCCGTTGTCCctaattttcggccggatgtccgttaccttcctctttctttgtgttggcattttaaaactCTGGTagatttgtgaggactctggttaactgctcctcagacctctgcagggtaaatccagacagctagctagactatctgtccaaactgagttttctgttgctcaactaaaacaaccttttaaacgtacacgttccaccaaaacaagttccttccagaggctattttgcagaggccccgtggctccgtccggcgcttagcacctcccatgacgattgtgattggtttaaagaaatgccaataaaccagagcacgtttttctcccatcccggaatgctgtgtggactagccagaccctcctccgcggcgctgtggaggaaggtctggcaatgcgagaaaatcC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU191777 lncRNA downstream 308 9122599 ~ 9123252 (-) True G142182
TU191763 lncRNA downstream 18329 9032947 ~ 9105231 (-) False LOC120572236
TU191723 lncRNA downstream 223885 8871087 ~ 8899675 (-) True G142143
TU191724 lncRNA downstream 244188 8874259 ~ 8879372 (-) True G142144
TU191710 lncRNA downstream 302882 8820358 ~ 8820678 (-) True G142131
TU191781 lncRNA upstream 1532 9125624 ~ 9125909 (-) True G142186
TU191782 lncRNA upstream 1926 9126018 ~ 9126234 (-) True G142187
TU191788 lncRNA upstream 24654 9148746 ~ 9149435 (-) False chrnb1l
TU191812 lncRNA upstream 73710 9197802 ~ 9205205 (-) True G142215
TU191818 lncRNA upstream 104447 9228539 ~ 9228859 (-) True G142221
XM_039821555.1 mRNA downstream 1901 9111390 ~ 9121659 (-) True cldn7a
XM_039821454.1 mRNA downstream 29367 9035606 ~ 9094193 (-) False LOC120572236
XM_039821453.1 mRNA downstream 29367 9035606 ~ 9094193 (-) False LOC120572236
XM_039821587.1 mRNA downstream 93200 9022932 ~ 9030360 (-) False LOC120572315
XM_039821414.1 mRNA upstream 6551 9130643 ~ 9153933 (-) True chrnb1l
XM_039823570.1 mRNA upstream 36310 9160402 ~ 9193336 (-) True chrnb1
XM_039822932.1 mRNA upstream 81132 9205224 ~ 9353768 (-) False fgf11a
XM_039822930.1 mRNA upstream 81132 9205224 ~ 9336107 (-) True fgf11a
XM_039822500.1 mRNA upstream 297535 9421627 ~ 9443291 (-) False tmem102
TU191765 other downstream 23146 9098741 ~ 9100414 (-) True G142173
TU191762 other downstream 29356 9032947 ~ 9094204 (-) True LOC120572236
XR_005641406.1 other downstream 29367 9040965 ~ 9094193 (-) False LOC120572236
TU191658 other downstream 582017 8517023 ~ 8541543 (-) False LOC120572366
TU191853 other upstream 333800 9457892 ~ 9465761 (-) False tmem256
XR_005641765.1 other upstream 1402295 10526387 ~ 10526550 (-) True LOC120573725
XR_005641777.1 other upstream 1405097 10529189 ~ 10529372 (-) True LOC120573737
XR_005641754.1 other upstream 1407592 10531684 ~ 10531847 (-) True LOC120573713
XR_005641776.1 other upstream 1411012 10535104 ~ 10535294 (-) True LOC120573736

Expression Profile