LOC120572199


Basic Information

Item Value
gene id LOC120572199
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 27615248 ~ 27620639 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU197727
atcaccatcaatCCTGGTTCTGTGATCCTGGAACTTCCTGCCAGTCCTGTTGTGGAGGGAGACAAAGTGAGTCTTTATTGTAGAAAGAAGGATACTCAGTCAAATCACATAGCTGATTTCTACAAAGATGGATCCAAACTCGGGACCTGGTATTCAAACAACATGACCATCCAAAATGTTTCAAAGTCTGATGAAGGACTCTACAAGTGCAGCATCTCTGGAGCTGGGGAATCACCACAGAGTTGGCTGACTGTTTTACAAGAAAGTAAAGGTGATGAAGGCATGTTTAATAACTCCATTCCAGCAGCCGACGAAGAGATCCGTCCTTCCAGTCACCCCCCTAATCTGCCCTCCCTGCTCTGGATTGTTGTGTTGGTGGCTCTGATGCTGTTGGTGATGGGACTTCTTCTCTGTAGGAAACACAGGGGTAGAGCAACACTGTCTCACAGAAATTACATGTAC
>XM_039821397.1
ATGGAGGTCACAGCTCTCTGCATAAGACTGTGGATGGACATGTTGGTCCTGCTGCTTCTAAGAATTgaccacagttactttgctcaGAAAGCTAATGTGGATTTTCCTCGCATTCTTCCAGACAGACTGCAGTTTTTTGAATATGAGAATGTCAGTGTGATCTGTGAAGAGTTAGGTGGTTTGACTGAATGGCGAGTGATGAGGAGGCTCAACGAAAGAAGTCCAACAGATTCTTACATCTGGCAGTCATCAGCACCATCCTGCACCATTAATCCCGCCTTTAAACGTCACAGTGGAGAGTACTGGTGTGAAGATGCAGAAGGGAACACACGCAAAGGGgtcatcatcaccatcaatCCTGGTTCTGTGATCCTGGAACTTCCTGCCAGTCCTGTTGTGGAGGGAGACAAAGTGAGTCTTTATTGTAGAAAGAAGGATACTCAGTCAAATCACATAGCTGATTTCTACAAAGATGGATCCAAACTCGGGACCTGGTATTCAAACAACATGACCATCCAAAATGTTTCAAAGTCTGATGAAGGACTCTACAAGTGCAGCATCTCTGGAGCTGGGGAATCACCACAGAGTTGGCTGACTGTTTTACAAGAAAGTAAAGCAGCCGACGAAGAGATCCGTCCTTCCAGTCACCCCCCTAATCTGCCCTCCCTGCTCTGGATTGTTGTGTTGGTGGCTCTGATGCTGTTGGTGATGGGACTTCTTCTCTGTAGGAAACACAGGGTATTTCTATCGATGGCATTTGGTCTTTTCTGTTCTCCAGTATTGGGCTGTTTGTCGTCTGGAAAACCAACACCAGGATCGCACTCACCTGCAGATCCTACAGATTCAGAAGAGGACAAAATCGCTGATTCACATCATGCAACATACAATGTTGtcaaaaaacaaagaagagagaaagTGTCTGATGGTGACAATGCAGGTGATCCGGACCTTATGACATACgctgtttttaaaaaacaaaggaaGAAGAAAGAGCTGGATGGGTCCGGAGCAGCTTCCAAGCGACGTCTAACAGACGAGAGTGTCTTCTATTCTACAGTCTACTACAGGCGACATATACCCGACTGAAGGACTGAGGAGGTGGTCTGTTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197727 False 462 TUCP 0.46 2 27616032 27617505
XM_039821397.1 True 1111 mRNA 0.46 10 27615248 27620639

Neighbor

gene id symbol gene type direction distance location
LOC120572193 NA coding upstream 80501 27524795 ~ 27534747 (+)
LOC120572194 NA coding upstream 129772 27480230 ~ 27485476 (+)
LOC120572196 NA coding upstream 145862 27458775 ~ 27469386 (+)
LOC120572191 NA coding upstream 157306 27442309 ~ 27457942 (+)
LOC120572566 NA coding upstream 178297 27434781 ~ 27436951 (+)
LOC120572567 NA coding downstream 5130 27625769 ~ 27631207 (+)
LOC120573332 NA coding downstream 103668 27724307 ~ 27726421 (+)
LOC120572337 NA coding downstream 160837 27781476 ~ 27802741 (+)
LOC120572571 LOC108249162,LOC101468201,LOC107376820,LOC101171440,LOC102781423,LOC100704195 coding downstream 185239 27805878 ~ 27836257 (+)
abce1 abce1 coding downstream 239167 27859806 ~ 27886409 (+)
LOC120572209 NA non-coding upstream 193701 27417270 ~ 27421547 (+)
LOC120572208 NA non-coding upstream 301265 27312542 ~ 27313983 (+)
LOC120572207 NA non-coding upstream 305242 27300077 ~ 27310006 (+)
LOC120573281 NA non-coding upstream 348024 27265359 ~ 27267224 (+)
G146431 NA non-coding upstream 846315 26767819 ~ 26768933 (+)
G146617 NA non-coding downstream 42241 27662880 ~ 27666609 (+)
G146621 NA non-coding downstream 48153 27668792 ~ 27669144 (+)
LOC120572229 NA non-coding downstream 70170 27690809 ~ 27691352 (+)
LOC120573333 NA non-coding downstream 96793 27717432 ~ 27724003 (+)
LOC120573436 NA non-coding downstream 114526 27735165 ~ 27738433 (+)
G146510 NA other upstream 3326 27610240 ~ 27611922 (+)
G146457 LOC103375710 other upstream 130718 26863734 ~ 27484530 (+)
slc10a7 slc10a7 other upstream 1691214 25900293 ~ 25924034 (+)
G145927 LOC106598369,LOC106569817,LOC106593049 other upstream 2111003 25424546 ~ 25504245 (+)
G145904 NA other upstream 2235460 25288183 ~ 25379788 (+)
LOC120572201 NA other downstream 39785 27660424 ~ 27663522 (+)
LOC120572568 NA other downstream 70762 27691401 ~ 27704702 (+)
G146660 NA other downstream 226451 27847090 ~ 27848854 (+)
G146666 NA other downstream 284976 27905615 ~ 27963213 (+)
G146694 NA other downstream 405261 28025900 ~ 28091450 (+)

Expression


Co-expression Network