LOC120572191


Basic Information

Item Value
gene id LOC120572191
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 27442309 ~ 27457942 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821374.1
CAGATCATGTGAGTGAGACACGGGACATTCAACAGAGCTCCATGATGCTTTTCCACACAGACggaaagtgccttaaacctcATCTCAGAACACTCCGTGTTTTCACTCTTCTCCTAACATACTTCTGTAGAGGTCAATCTCAGCTGATTGGCTCATCAATAGTAGCAACACTTGGTAATGACATCATCTTACCATATCAACTGGAGCCTGTGGAAGATGCTACTGACTTGACAGTGGAGTGGACGAGGCCTGACCTGAACCCCAGATTTGTCCATGTGTGGCGTTCTGGGAAAGAACTTGTGagtaaaaaacacaaatccTTCGAAGGAAGAACATCGCTGTTCATCGATGAGCTGATGTTCGGAAACATTTCACTGAAACTGTCCAAACTGAAACTCGCTGATCGGGGAACATACAGATGTTTTATTCCAGCACTGGACAGGCAGTCTTTTGTTCAACTAGATGTTGGTGCTGTCTCCTCACCAACCATCAGTTTAGCAGGGATTGACAGAGACAAAGGAGGAGTAGTGCTACAATGTGAGTCTAAAGACTGGTATCCAGAGCCTGAGGTGTTGTGGCTGGACGGTGAGGGAAACCTCCTCCCTGCTGGACCTTCAGAGACAGTCAGAGGTCCTGATGATCTCTATACTGTCAGCAGCAGAGTGACTGTGGAGAAGAGACACAGCAACAGCTTCACCTGTAGAGTCCAGCAGAAGAACACTAACCAgaccagagagacagaaatcCATGTTCCAGATGATTTCTTTGAGGTCCAGTCTAGTTCTTCTGTTCCCATCAACACTGGTTTGGCTGTTAGTTTGGCTGTTTGCATCATCCTGTTCATTCTGTTACTTCTCTTTTCTGTGTGGAAATGGAGACAAAACAAAATCAACACGAAAATGAGCCACAGGGATGAACCTGATAAAGAAGAAAACCGAACTAATGATCCGTCTGTCACTGCAGAAGAAACCAAGTCTTTGacaggaaaaaagagaaagaagatcAAACTTGAGcagcagaggagggaggaagctGAGAGAGCAGTTCAGACTCTGAAAAAGGAGCTGGAGACCAAGAAGAAGGAGTTTGAAAGTAAACTAGCTGAAGTCCAGCAGCAGCTCAACGATGAAAAGCAGAAACATGAGGATCTGATGGCAGACATTCAAAAGATGAAGGATGACATGCAGGCCAAAATCAATGAGTTGGAGGAAAAAGCTGGCCTGTCTCTGTTTGGGTTGAAGATTTTTAAAAAGCGGACACGTGAGGAAGAGCAGCAGAAGAGGGAGGAAGCTGTCCAGATCCTGACCCAGATGCTGGATGAAGAGGAGAAGCAAAGGAGTGAGAACCAGCAGGAGCAGCTGCAAAAGGAGCTGGAGATAAAAAAGGACAGAGAACAAGGTGTTAACACAAAGTGGAAGAACACTAATGACGAGCTGAAACAGGCAAAGCAAGATCTCAAGAGCAGGAATGAAGAGATCAGCACGCTTAAGAgagaaCTCTGGGATgagcagaagaagaaagaggaaactgAGAAAGCTCTGGCGGAGCTGATGGCCAAAAACATGGAGTGTCAGCAGCAGCTCCAGGAGGAGAAGACTAAAAGGGGGAAAGCTGAGGAAAATTTGAAGAAACTACAGGAGGAGAACAAGGTACATGAAAGTAAAGTTGAAGTGAGGGAGCATGAAGATTTTAAGTCTGAGAAGGACAAGACCGGCTCGGCCAATCAGAGCTCAGCAACAGGACCTGTCATTGTTCATGAGGTTGGGCGAAATGGGAAATTTATCCATCTCAGAAACACGTCCAGAGAgGACCAAGAACTGGGAGAATGGAATTTAGAAATGCAGATCAACGACACACAACCCATCACATACACATTTCCGAAAAAATTCAAGCTCAAGTCTGAACAAATCGTCAATATTGTGGTCCCAGGTTATGGTAAGGATCATCATCCCATTGATCTGATGTGGAGGGACCTGAAGTCCTGGACCCCCGGAGACAAACTAACGTTCACCCTCACCACCAACAAGGGAGAGATCAAATCAACTCAGTTAATAGTCTCTGGAAGATAATAATTAGCCTGCTGTCATACTAGTTTTTTTACCTTACCTTTCTGCTCCTTTTTTGTACTACAATAATCTCCTATTTAGCTGCTGCGATTAGCAACAGAAAGCTCCATGGACAAAATGATCACATTAACACACGTTACACATCAGAAACATGACGACTCAGATCTTCCTCTAAAAACACAGATTGTAGTGATGCTCTGTCACCATGATGTCACATCTCTCTTTAATCTGAAATCAACTAAAGAAGAATGTCATGAATATTAAATCAAACGCTccgtttttgttattgtggtaACAGTTACTGAAAAACACTCTTCATTATGAAGACAAAATATAactctaaaatgttttttttgcatttgtatcTGAATTGAATGTATTCAATCTTCAAAGATCTTTGttattctgttttgttttgtttaactgtaatttaatttatataggaTAGTCAATGTAGAATTTTGTAATAAAGAGATTAAAAGACAAATAGAAGTTTGATTTCAA

Function

GO: NA

KEGG:

id description
ko00140 Steroid hormone biosynthesis
ko00830 Retinol metabolism
ko04146 Peroxisome
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821374.1 True 2570 mRNA 0.43 16 27442309 27457942

Neighbor

gene id symbol gene type direction distance location
LOC120572566 NA coding upstream 5358 27434781 ~ 27436951 (+)
LOC120572192 NA coding upstream 13510 27352822 ~ 27428799 (+)
LOC120572206 NA coding upstream 100331 27333382 ~ 27341978 (+)
LOC120572564 NA coding upstream 118054 27317335 ~ 27324255 (+)
LOC120572200 NA coding upstream 143079 27294469 ~ 27299230 (+)
LOC120572196 NA coding downstream 833 27458775 ~ 27469386 (+)
LOC120572194 NA coding downstream 22288 27480230 ~ 27485476 (+)
LOC120572193 NA coding downstream 66853 27524795 ~ 27534747 (+)
LOC120572567 NA coding downstream 167827 27625769 ~ 27631207 (+)
LOC120573332 NA coding downstream 266365 27724307 ~ 27726421 (+)
LOC120572209 NA non-coding upstream 20762 27417270 ~ 27421547 (+)
LOC120572208 NA non-coding upstream 128326 27312542 ~ 27313983 (+)
LOC120572207 NA non-coding upstream 132303 27300077 ~ 27310006 (+)
LOC120573281 NA non-coding upstream 175085 27265359 ~ 27267224 (+)
G146431 NA non-coding upstream 673376 26767819 ~ 26768933 (+)
G146617 NA non-coding downstream 204938 27662880 ~ 27666609 (+)
G146621 NA non-coding downstream 210850 27668792 ~ 27669144 (+)
LOC120572229 NA non-coding downstream 232867 27690809 ~ 27691352 (+)
LOC120573333 NA non-coding downstream 259490 27717432 ~ 27724003 (+)
LOC120573436 NA non-coding downstream 277223 27735165 ~ 27738433 (+)
slc10a7 slc10a7 other upstream 1518275 25900293 ~ 25924034 (+)
G145927 LOC106598369,LOC106569817,LOC106593049 other upstream 1938064 25424546 ~ 25504245 (+)
G145904 NA other upstream 2062521 25288183 ~ 25379788 (+)
LOC120573105 NA other upstream 2063745 25292066 ~ 25378564 (+)
G145901 NA other upstream 2160996 25192497 ~ 25281313 (+)
LOC120572197 NA other downstream 126036 27583978 ~ 27667090 (+)
G146510 NA other downstream 152298 27610240 ~ 27611922 (+)
LOC120572199 NA other downstream 157306 27615248 ~ 27620639 (+)
LOC120572201 NA other downstream 202482 27660424 ~ 27663522 (+)
LOC120572568 NA other downstream 233459 27691401 ~ 27704702 (+)

Expression


Co-expression Network