LOC120573015


Basic Information

Item Value
gene id LOC120573015
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 34838036 ~ 34842276 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU201577
TTTCACCAACAGTTAGGATGGAGGACACATCTCTACTCTGGCTGCTCTcctctctgactgtgagtccAGGATAGTCTGTCTTCCGCTGATTCTCTCTACAGAGAAACCTACGACCATAAACCCTACTTCGAGCTCTCTGCCGCCCCCTGACACCTCAGCTCCGCCCCCAGCTTCAGACCGCCTCCACCTTGTGTTCAGACTGGTCTGCCACCTGGTGGTGTTCTGTCCGTACTGCATCTCCACTTTCATCATGGTGTCTTTATATAGTCAGAGGGCCACAGGAAATGACCTGCCTGTCTCCGTGGTGATGACCCCACTCAACCAGGCTGAGACGGGATTGGACGAAGACTATGATGATGTCACCACGGAGCATCACTTCTGAACTGATCTGAGAAGAAGCTCAAATGTTTCAAGTCCTCATAAATCAGAAAGAGTGGCAGCCTCAGAACTCTTCCCTGTGGATCTCCACATGTTCTAGTTTTAAAATTCTGCCAACAGCTGACAGTTTgaaacatagaaataaaatggatcaTTTCATTTCTATAGTTTGCAGCTGATTTGACCGTACCAAAACCAGCCTCTGAAAACGtaaccagctgagtcgcagcgacaCCATCAGCTTGTTTTAGTCGAGCTGAAACGGGCCGCTTCAGAAGTAAAGGTTTCTTCTCGTTGCCCTCTTTGCTCTGAACTGGACTTTAGTAGCAGATAGTTGTTCAGGTTCTGCTGTAAGTCGTGTTGTTGGTCATGTCTGTTTAGATGTCAAGTTTTTAATCTCTT
>XR_005641589.1
CTGACTTCACTACTGAGCAGCCCAACATACCAATcctctctgactgtgagtccAGGATAGTCTGTCTTCCGCTGATTCTCTCTACAGAGAAACCTACGACCATAAACCCTACTTCGAGCTCTCTGCCGCCCCCTGACACCTCAGCTCCGCCCCCAGCTTCAGACCGCCTCCACCTTGTGTTCAGACTGGTCTGCCACCTGGTGGTGTTCTGTCCGTACTGCATCTCCACTTTCATCATGGTGTCTTTATATAGTCAGAGGGCCACAGGAAATGACCTGCCTGTCTCCGTGGTGATGACCCCACTCAACCAGGCTGAGACGGGATTGGACGAAGACTATGATGATGTCACCACGGAGCATCACTTCTGAACTGATCTGAGAAGAAGCTCAAATGTTTCAAGTCCTCATAAATCAGAAAGAGTGGCAGCCTCAGAACTCTTCCCTGTGGATCTCCACATGTTCTAGTTTTAAAATTCTGCCAACAGCTGACAGTTTgaaacatagaaataaaatggatcaTTTCATTTCTATAGTTTGCAGCTGATTTGACCGTACCAAAACCAGCCTCTGAAAACGtaaccagctgagtcgcagcgacaCCATCAGCTTGTTTTAGTCGAGCTGAAACGGGCCGCTTCAGAAGTAAAGGTTTCTTCTCGTTGCCCTCTTTGCTCTGAACTGGACTTTAGTAGCAGATAGTTGTTCAGGTTCTGCTGTAAGTCGTGTTGTTGGTCATGTCTGTTTAGATGTCAAGTTTTTAATCTCTTcagatcaaataaaataaaatgatgagcATCTTTTCTCTCTGTGCTTTGTTCTAATGTGATCATAACTTCACTTCTCTCATACCCAACAGCCTGTTTCCTTGTAGCTGACATGTGATATAGTCGTATa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU201577 False 780 lncRNA 0.47 3 34838163 34842276
XR_005641589.1 True 893 lncRNA 0.46 3 34838036 34841517

Neighbor

gene id symbol gene type direction distance location
LOC120572793 NA coding downstream 70150 34678211 ~ 34767886 (-)
LOC120572626 NA coding downstream 88618 34728723 ~ 34749418 (-)
LOC120572863 NA coding downstream 489625 34343897 ~ 34348411 (-)
LOC120572798 NA coding downstream 515507 34301990 ~ 34322529 (-)
LOC120572892 NA coding downstream 544038 34292360 ~ 34293998 (-)
LOC120572788 NA coding upstream 64691 34906967 ~ 34925868 (-)
LOC120572628 NA coding upstream 139112 34981388 ~ 34986204 (-)
LOC120572922 NA coding upstream 203677 35045953 ~ 35046622 (-)
LOC120572945 NA coding upstream 206643 35048919 ~ 35049557 (-)
LOC120572632 NA coding upstream 338049 35180325 ~ 35194259 (-)
G149044 NA non-coding downstream 106439 34723961 ~ 34731597 (-)
G148945 NA non-coding downstream 187450 34268529 ~ 34650586 (-)
LOC120573019 NA non-coding downstream 266029 34570437 ~ 34572007 (-)
G149005 NA non-coding downstream 277779 34557602 ~ 34560257 (-)
G149001 NA non-coding downstream 283514 34554008 ~ 34554522 (-)
LOC120572990 NA non-coding upstream 47921 34890197 ~ 34890807 (-)
G149311 NA non-coding upstream 322260 35164536 ~ 35165076 (-)
G149328 LOC106579430,LOC106609078,LOC107088658 non-coding upstream 394810 35237086 ~ 35237753 (-)
LOC120573001 LOC106584751 non-coding upstream 396523 35238799 ~ 35239298 (-)
G149339 NA non-coding upstream 484666 35326942 ~ 35329195 (-)
G149062 NA other downstream 6658 34824648 ~ 34831378 (-)
LOC120572624 LOC103360266,LOC104932671,LOC103398742 other downstream 416039 34413280 ~ 34421997 (-)
LOC120572901 NA other downstream 484598 34351255 ~ 34353438 (-)
LOC120572826 NA other downstream 636181 34046237 ~ 34201855 (-)
LOC120572812 NA other downstream 661991 34082462 ~ 34176045 (-)
LOC120572844 NA other upstream 10065 34852341 ~ 34860919 (-)
G149285 NA other upstream 203649 35045925 ~ 35049559 (-)
G149309 NA other upstream 312806 35155082 ~ 35162119 (-)
G149349 NA other upstream 529494 35371770 ~ 35466203 (-)
G149408 NA other upstream 823381 35665657 ~ 35666244 (-)

Expression


Co-expression Network