LOC120572225 (LOC104940940)


Basic Information

Item Value
gene id LOC120572225
gene name LOC104940940
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 38735184 ~ 38743390 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821436.1
CATAGCCTATAAAAAGGAGGACCCGTGTCCGCGGGCATCTTCACCTGCAGTCTGCACCCTGGAGCCGGACACGCCGCATCTCTCCTCCCGATACCCTCACGGCTGGTTTATTTGCTTCCACGTTTCAAACATCGTGTAGTGGCGCTTCGGACGGAGTTCGTGGGACAAAACATCCGGGCTTTTTCTTCATACTGTAACGTCTCTCGGAGAAAAGGAACTCTGCAAGAAAAACAGCGGTGATGAGTCGCCAGCTGTTACTGATGCTGACGACGTGCGCGGCGCTGCTGGCGCTGGCGGCGTGTTCCCGTGGCGGCGAGGCTCGCGTCAGACTCAACTCCATCCGGACGGTGATCCTGAGGGGGGGCCAGGCGCTGCCGAGCAACAGGAGCGCCTGGGAGCCCAGCCTGGACCTCACGCTCTACCAGTGCATGAGCGACCTGGAGTGCAGCGAGGGGAGCTACTGCCACGCGCCGACCAAAGGCCCCGCCCACTCCCGATGCCAGACCTGCCGCCGGAGGAAGAGGCGTTGCCATAGGGATGGCATGTGTTGCCCGGGCAACCGCTGCAGCAAGAATATCTGTGTGCCCGACAGCTTTGAGTCTCAGGGGATCCCAGACTCGGACGGAGGGATGACTCCGCTGTCCAAACTAAAGAAAggatggaggaagagagggaggaagaacaTCAAAAGCTCCTCCAGTAAAGgtCAGGTCGGGGATCCGTGTCTCCGGTCCTCGGACTGCTCCGACGCCCTGTGCTGCGCTCGCCACTTCTGGACTCGCATCTGCAAGCCGGTGTTGCGGGAGGGCCAGGTTTGCACGCGAGAGCGCCGAAAGGGGAACCACGGTTTGGAGCTGTTCCAGCGCTGCCCGTGCGGCGACGGACTCGGCTGCCAAACCCTGCGAGAGCCCGGCGCCCAGCCTGCGTCTCCGTCTTCTTCGTCTTCTTCGTCTTCGTCATCTCTGCTGGCGGCGCCCAGGTTCGCGGCGTCCTCTTCCTCGTCTCGCCACTCCTCGCCGCACACGTCGCTGCTGTCTTCGTCCGCAAAGTCTTCGTCTTCGACGTCGCAGGCCGTGGCGAAGACGAGACTTCACGTGTGCCAGAAAAACTAAAGAaaggatggaaggatggattggacagaaagaaggaaagacagagaggagaagagagaggggggaaaaaggTGGTTTGAAAGCTGAAAAGGGAAGGGAAGATGTGCCTTCCCTTTGCCCGGGAGCGAAAGGCAGGGACGGAGAAAGaagagagcgagacagagacAAATGGAGGGAGGGGTGAATAATCTGCGAATACCTGTTTACACCTGTGGAAACCTCTCATCCTCCCAAACTGTCCCGTTATCTCGATGCTAATCGGCTTCCTGTCGGGGTGCATTCACacgcaaatttaaaaaaaagacgcAGGATGTGAAACTCTTTGTGCTTCAGATCTggtttcctctctttttccggGCGTCTAGACGAGCAGAAACCCGCTTTGAAATCCGGTTTGACTCCATTTACAGCGACAAGGAAAagcattaatattaaaataaaccaAGCTAACACATGTCTGTTGTAGAGTTGCATTTGTAGGACCTGAAGAGCCACAGATGGCAGGTTGATTTTAACAACCACGATACAGAAAATCTAAAGATCTTATTCTCAAACAAGGAAACTTCTGTGCAAAAGGCCATAGTTTCACTAATttcaaaaaatgctttcatgtGTGAAGAGACTTTATACAATAAACAAAACcatctgcaaactttccctcaagttactagctagcgctagcggtagctagctagcttagttacatttttcaaaacgagtctagttgtagtcttgcaatgtgtgaccctgcgAGATCCCCTTTACATATTATGACcgtctttaacgttagatgtgTGAGAGGACTGTCTTTAGACGTGAGacagtgtcagactttagtctgttcaaagtcttctagtgttTGGTAGGTAGGCATTCCTTCGGCTTAAAATTGGAAGTAAACTTGATTTTACACACTATAAACTGAACTTACCCTTTAATTCAGCTCAGTTACTAAGACATTTCACTACATTTGTCCACTCTGAAGGGCTGCAAAATGTCAACCAGCATCAAAAATTACAATCATATTTTCAATTCATATCGATTATCTCTTACGTCTTGCGTACATTGGAAGAATACTTGATTTTTTACGATTGAAAAACTGAGCTTAACTTTTACTTTCCAATCAGGAGAATtaagtgtgtgtaaaaaaaccCTGCTCTGACggtttattttcatcatttaaACATGTCTTCTTTGGCTATTAGTCTCCATAGAGACGCTAAGGTTAACCAAAATTAGTTTCCTGAAGGACTCAAAgaatttaaatgaaagaaaagacGTTGTAGATGTGAAATGTTCCACTGAAACTCCCCAAAACAACAACTGTACCACAAATACAATACATCTTCTGTTTTTCAAAACTGGTCGTGGGCCAAAGTTATGAAGATATTTCACAACATCTGTCAACATCTGTCTAATCCAAAGTCCTGCAAAACAGCCAAACGCCATGATTAAAAGCAGAACAAATTCCATCCTGTTTTCAATTTACTTAGATTTTTCTCTTTATGTCTTACGAGAGCTTAAAGGACAATAAAAAAggtagtttataaagacagtaccgttcacgtatatacaggcgggcgccatctcGGGACAACTGTCACGACCAGTTGAACGATGAACAGCAACCAGTAACATTGCTCAAACACAGCGTTCGAAAACATGAcatgttttcccaagatggtgccctgcctgtatacgtgagccagtggtgtagtctacgtgatacgcaggtatacacagtatactcaataagaaagctccaggatttccatat

Function

NR:

description
PREDICTED: dickkopf-related protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821436.1 True 2889 mRNA 0.48 5 38735184 38743390

Neighbor

gene id symbol gene type direction distance location
LOC120572654 rbm46,LOC102795526 coding downstream 107880 38606289 ~ 38627304 (-)
LOC120573401 NA coding downstream 169535 38561962 ~ 38565649 (-)
LOC120573391 LOC106532721,LOC108250468 coding downstream 247815 38475763 ~ 38487369 (-)
LOC120573402 NA coding downstream 396425 38285892 ~ 38338759 (-)
LOC120573407 NA coding downstream 532840 38199809 ~ 38202344 (-)
cfi NA coding upstream 50172 38793562 ~ 38816682 (-)
LOC120572318 LOC103365258,LOC100696033,LOC101477093,LOC102302035 coding upstream 85170 38828560 ~ 38866782 (-)
LOC120572656 NA coding upstream 138848 38882238 ~ 38889171 (-)
LOC120572319 LOC102301736,LOC102790445,LOC102077377 coding upstream 145505 38888895 ~ 38899886 (-)
wdr55 wdr55 coding upstream 161462 38904852 ~ 38914929 (-)
G150203 NA non-coding downstream 34664 38699827 ~ 38700520 (-)
G150194 NA non-coding downstream 40348 38691845 ~ 38694836 (-)
G150193 NA non-coding downstream 43408 38690188 ~ 38691776 (-)
G150202 NA non-coding downstream 55704 38679105 ~ 38679480 (-)
G150196 NA non-coding downstream 122129 38612247 ~ 38613055 (-)
G150220 NA non-coding upstream 21827 38765217 ~ 38791863 (-)
G150232 NA non-coding upstream 34223 38777613 ~ 38826725 (-)
G150230 NA non-coding upstream 104268 38847658 ~ 38874828 (-)
G150242 NA non-coding upstream 108958 38852348 ~ 38852864 (-)
G150231 NA non-coding upstream 115199 38858589 ~ 38907078 (-)
G150192 NA other downstream 45591 38611655 ~ 38689593 (-)
lratb.1 LOC101070953,LOC108248302,LOC106910222,LOC103149051,LOC103367949,LOC106949946,LOC107082284 other downstream 63371 38644566 ~ 38671813 (-)
LOC120572655 NA other downstream 99591 38561269 ~ 38635593 (-)
LOC120572653 LOC102793922,LOC108250468,LOC103389793,LOC103129600,LOC106908923,LOC101466812,LOC106943038 other downstream 194014 38487094 ~ 38541170 (-)
G150174 NA other downstream 201884 38528917 ~ 38533300 (-)

Expression


Co-expression Network