LOC120572920


Basic Information

Item Value
gene id LOC120572920
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 29516852 ~ 29520259 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822441.1
TTCCTCTTGTTCAGCACCTCGCCCACAGGACAGctgagagaaaggaagagaaggaAATACTGTGGCAGCTATCACCTTCACCATGAAGACACTGACTCTGTTTGCACTGGTTTGTGCCATGATGGCTCTGACTGGAGCTGCTGCTGTTCCAGAGGAAAAGGCCGATGAAGACCAAACAGCTGATATTAATCTGGCCAAGAGGACATTTTGTTCGACAAGACGTTGTTCCAGTGGTTGGACTCCGTACAGTGGACGCTGTTTCCGCTTTGTTCGAAGACCAATGACCTGGGCTGCAGCTGAGAAAAACTGCATGTCCATGGGTGGACACCTTGTTTCCATTCACAACATCCTGGAGTACCTTAAGCTTCAGAATCTCATGAGCACCAATCGTGTGTACAAAGAAACATGGATTGGAGGAACTGACGCCCAAGAGGAGAATCAATGGTTCTGGAGCGACGGTACACGTTTCAACTACATGAAATGGTGTCGTGGGGAGCCTAACAACAGCCTTGGCAAGCAGCACTGTTTGGACATTAATCATGAAGGTTACAAGTGCTGGGATGACCTGCAATGTAACCGCCAATCTCCGTCTATCTGCGCCAAGAAAATCTGATGATTCCTGGGCTGACCCAATGACGTGAAGTACCCCGTAAAAAGCACAAACACTGGTTTGGGTTTCTGCCTTTAAATACATCTGTCTTCACTCTGTCAGTCTCACATCTGAGCTGAACGGTCTCATTTAAATCTCATATCTTGATTTCTGTTCTATCGCTGTAACGCTACTTAAGGAAGGAAGCGACAGGTGACAATAAGGAGCTGGACTGTCTCTGAGGCTTTTGCCTTTAATAAGAGCAAACTGAATGTGTTATGAAAAAATTGCTTTTAGCACAACCTGACATGTATTCTTTTAGAGTGAACTCTTCTTTCTTGTCTTATGCAAAATTAAAAGCCTCAAGTACTGAAACAA
>XM_039822442.1
aagagaaggaAATACTGTGCTATCACCTTCACCATGAAGACACTGACTCTGTTTGCACTGGTTTGTGCCATGATGGCTCTGACTGGAGCTGCTGCTGTTCCAGAGGAAAAGGCCGATGAAGACCAAACAGCTGATATTAATCTGGCCAAGAGGACATTTTGTTCGACAAGACGTTGTTCCAGTGGTTGGACTCCGTACAGTGGACGCTGTTTCCGCTTTGTTCGAAGACCAATGACCTGGGCTGCAGCTGAGAAAAACTGCATGTCCATGGGTGGACACCTTGTTTCCATTCACAACATCCTGGAGTACCTTAAGCTTCAGAATCTCATGAGCACCAATCGTGTGTACAAAGAAACATGGATTGGAGGAACTGACGCCCAAGAGGAGAATCAATGGTTCTGGAGCGACGGTACACGTTTCAACTACATGAAATGGTGTCGTGGGGAGCCTAACAACAGCCTTGGCAAGCAGCACTGTTTGGACATTAATCATGAAGGTTACAAGTGCTGGGATGACCTGCAATGTAACCGCCAATCTCCGTCTATCTGCGCCAAGAAAATCTGATGATTCCTGGGCTGACCCAATGACGTGAAGTACCCCGTAAAAAGCACAAACACTGGTTTGGGTTTCTGCCTTTAAATACATCTGTCTTCACTCTGTCAGTCTCACATCTGAGCTGAACGGTCTCATTTAAATCTCATATCTTGATTTCTGTTCTATCGCTGTAACGCTACTTAAGGAAGGAAGCGACAGGTGACAATAAGGAGCTGGACTGTCTCTGAGGCTTTTGCCTTTAATAAGAGCAAACTGAATGTGTTATGAAAAAATTGCTTTTAGCACAACCTGACATGTATTCTTTTAGAGTGAACTCTTCTTTCTTGTCTTATGCAAAATTAAAAGCCTCAAGTACTGAAACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822441.1 True 967 mRNA 0.45 7 29516852 29520259
XM_039822442.1 False 918 mRNA 0.45 7 29516897 29520259

Neighbor

gene id symbol gene type direction distance location
LOC120572872 NA coding upstream 108587 29385915 ~ 29408265 (+)
LOC120572916 NA coding upstream 159412 29356226 ~ 29357440 (+)
LOC120572875 NA coding upstream 174172 29337628 ~ 29342680 (+)
LOC120572873 NA coding upstream 256394 29254081 ~ 29260458 (+)
LOC120572882 NA coding upstream 280072 29174343 ~ 29236780 (+)
LOC120572760 NA coding downstream 197593 29717852 ~ 29739188 (+)
LOC120572888 NA coding downstream 302960 29823219 ~ 29825432 (+)
LOC120572934 NA coding downstream 358610 29878869 ~ 29883395 (+)
LOC120572883 NA coding downstream 391163 29911422 ~ 29934098 (+)
LOC120572819 NA coding downstream 418935 29939194 ~ 29953407 (+)
LOC120572982 NA non-coding upstream 7246 29509182 ~ 29509606 (+)
G147198 NA non-coding upstream 90126 29291450 ~ 29426726 (+)
LOC120572959 NA non-coding upstream 153738 29352939 ~ 29363114 (+)
LOC120573012 NA non-coding upstream 281434 29208411 ~ 29235418 (+)
G147129 NA non-coding upstream 343001 29173554 ~ 29173851 (+)
G147296 NA non-coding downstream 44322 29564581 ~ 29564977 (+)
G147302 NA non-coding downstream 53382 29573641 ~ 29576526 (+)
G147304 NA non-coding downstream 55384 29575643 ~ 29577819 (+)
G147306 NA non-coding downstream 64635 29584894 ~ 29610618 (+)
G147311 NA non-coding downstream 71744 29592003 ~ 29594806 (+)
G147192 NA other upstream 36365 29269414 ~ 29480487 (+)
LOC120572956 NA other upstream 95053 29414263 ~ 29421799 (+)
G147035 NA other upstream 451343 29029482 ~ 29065509 (+)
tec tec other upstream 865306 28617865 ~ 28651546 (+)
G146753 NA other upstream 931785 28555552 ~ 28585067 (+)
G147303 NA other downstream 53168 29573427 ~ 29618152 (+)
clrn1 clrn1,LOC102780584 other downstream 155054 29675313 ~ 29690845 (+)
LOC120572592 tmub1,LOC105023792 other downstream 171070 29691329 ~ 29696252 (+)
G147348 eif5b other downstream 225096 29745355 ~ 29860892 (+)
G147352 NA other downstream 229830 29750089 ~ 29797132 (+)

Expression


Co-expression Network