LOC120572875


Basic Information

Item Value
gene id LOC120572875
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 29337628 ~ 29342680 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822383.1
tgatgatcgaGTACTGTAAGCTATTTCTGCTGGTCGCTCTATGGTCTGTGGAGGTCTCAAACACAGCAGAATTACGGTGCCCAGATACATCGTTGGATGCAGAAGCTGACAAGACAGTAATTCTACCGTGTTGGACTGTGCCCAAAATGGATGTCGGCAACAAAGTGGAGTGGGTGCTTAATGATACCGTTGATGTCCATTTGCTCCGTAACGGAAAACCTGAGTTTGATCATCAGGGGAAGGACTACAAAGACAGAACATCTCTTTTCGACAGTCAACTGGGAACAGGAAATTGTTCACTGCGTTTGAAAACCAAGATGACTCATACTGGGAGATATCGCTGCTCTGTTAGAATTGGAGATGAGACAAAACACTGTTTTATATCCCTCACCATCCGTCCACATGAAGGAAGCAACTCCACTCCACTCAATCTATCAGATAGTAACCAGCTACACGGTACCAACTCTCCAGGTGGTGGCAACGACTCCACTTTTCCTCCGGGTGGCATCGTCGGCATCATCGTCggcatcatcgtcatcatcattcTTGGGGTGATCTGGAAGCGTAAAATGTGCTGTAAGCCAATCCAATCAATAGAAGAACCAAACGACCACAacgagggagaggaagggaTTCCTCTGGAGCAGGGACATCTGGCCAGTCTGTAGCTGCTCTTTACCTGCCAAAAGGACTTTATTATAACATTCCAGTGAAACAAGCTCAGGAAAATATTTTTGCACTGCCCTCCTGTAAATGTCACAACTAGTGTTTAATTTGTTAAGTGGAAGGTCCCGGAGGGTGGGTGGATCCGGTGACTCAAAACGGGGATTGGAGGTAACGgaacaaaaagaaatgacactgcctacgtagct
>XM_039822384.1
tgatgatcgaGTACTGTAAGCTATTTCTGCTGGTCGCTCTATGGTCTGTGGAGGTCTCAAACACAGAATTACGGTGCCCAGATACATCGTTGGATGCAGAAGCTGACAAGACAGTAATTCTACCGTGTTGGACTGTGCCCAAAATGGATGTCGGCAACAAAGTGGAGTGGGTGCTTAATGATACCGTTGATGTCCATTTGCTCCGTAACGGAAAACCTGAGTTTGATCATCAGGGGAAGGACTACAAAGACAGAACATCTCTTTTCGACAGTCAACTGGGAACAGGAAATTGTTCACTGCGTTTGAAAACCAAGATGACTCATACTGGGAGATATCGCTGCTCTGTTAGAATTGGAGATGAGACAAAACACTGTTTTATATCCCTCACCATCCGTCCACATGAAGGAAGCAACTCCACTCCACTCAATCTATCAGATAGTAACCAGCTACACGGTACCAACTCTCCAGGTGGTGGCAACGACTCCACTTTTCCTCCGGGTGGCATCGTCGGCATCATCGTCggcatcatcgtcatcatcattcTTGGGGTGATCTGGAAGCGTAAAATGTGCTGTAAGCCAATCCAATCAATAGAAGAACCAAACGACCACAacgagggagaggaagggaTTCCTCTGGAGCAGGGACATCTGGCCAGTCTGTAGCTGCTCTTTACCTGCCAAAAGGACTTTATTATAACATTCCAGTGAAACAAGCTCAGGAAAATATTTTTGCACTGCCCTCCTGTAAATGTCACAACTAGTGTTTAATTTGTTAAGTGGAAGGTCCCGGAGGGTGGGTGGATCCGGTGACTCAAAACGGGGATTGGAGGTAACGgaacaaaaagaaatgacactgcctacgtagct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822383.1 True 872 mRNA 0.47 5 29337628 29342680
XM_039822384.1 False 869 mRNA 0.46 5 29337628 29342680

Neighbor

gene id symbol gene type direction distance location
LOC120572873 NA coding upstream 77170 29254081 ~ 29260458 (+)
LOC120572882 NA coding upstream 100848 29174343 ~ 29236780 (+)
LOC120572868 NA coding upstream 135104 29193810 ~ 29202524 (+)
LOC120572237 NA coding upstream 246678 29080213 ~ 29090950 (+)
LOC120572238 NA coding upstream 260144 29072810 ~ 29077484 (+)
LOC120572916 NA coding downstream 13546 29356226 ~ 29357440 (+)
LOC120572872 NA coding downstream 43235 29385915 ~ 29408265 (+)
LOC120572920 NA coding downstream 174172 29516852 ~ 29520259 (+)
LOC120572760 NA coding downstream 375172 29717852 ~ 29739188 (+)
LOC120572888 NA coding downstream 480539 29823219 ~ 29825432 (+)
LOC120573012 NA non-coding upstream 102210 29208411 ~ 29235418 (+)
G147129 NA non-coding upstream 163777 29173554 ~ 29173851 (+)
G147042 NA non-coding upstream 241028 29096270 ~ 29096600 (+)
G147017 NA non-coding upstream 395913 28937066 ~ 28941715 (+)
G147007 NA non-coding upstream 434289 28891335 ~ 28903339 (+)
LOC120572959 NA non-coding downstream 10259 29352939 ~ 29363114 (+)
LOC120572982 NA non-coding downstream 166502 29509182 ~ 29509606 (+)
G147296 NA non-coding downstream 221901 29564581 ~ 29564977 (+)
G147302 NA non-coding downstream 230961 29573641 ~ 29576526 (+)
G147304 NA non-coding downstream 232963 29575643 ~ 29577819 (+)
G147035 NA other upstream 272119 29029482 ~ 29065509 (+)
tec tec other upstream 686082 28617865 ~ 28651546 (+)
G146753 NA other upstream 752561 28555552 ~ 28585067 (+)
G146757 NA other upstream 936278 28399266 ~ 28401350 (+)
G146747 NA other upstream 983960 28350866 ~ 28353668 (+)
LOC120572956 NA other downstream 71583 29414263 ~ 29421799 (+)
G147303 NA other downstream 230747 29573427 ~ 29618152 (+)
clrn1 clrn1,LOC102780584 other downstream 332633 29675313 ~ 29690845 (+)
LOC120572592 tmub1,LOC105023792 other downstream 348649 29691329 ~ 29696252 (+)
G147348 eif5b other downstream 402675 29745355 ~ 29860892 (+)

Expression


Co-expression Network