htra3b (htra3)


Basic Information

Item Value
gene id htra3b
gene name htra3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 5171549 ~ 5198958 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822977.1
TCTGAGTCCCGTCGCCACGCCTCCAGGAGCACAGCTTCTCCCCacatctcctccctctctccggCCAGCTTCACTGCTAGAGGCGCTCTCCCTGCCGAGCGGATGTGCACTCTGCCTGGGCAAAGGAAGCACAGCGTCCCGTCTCACTCCGAGGCTACTACAAGATAGCAAATAACAAGCCGCACCGTCCAATTTACAATATCAGGCTCGCTTTATTCTGATGTATTTAGAAATATTAAAGAGACATTTGCCTTTTTGTCTTTCGTGTGTGTGGATTCGCATCTGTAAAGTATCCACAAAGTGATGAGCAGCGCGGAGCCAGGGAATGTGTTCTCTTCGTAAACTTCTCTAAGTTTCTATCCGCTCGAACTCCCgccataaaaaaacaacaaccaaaatgCAAGTTCTCCTGTACACCGCTGTGTTCCTGTACCTCAAGGAGTCTGCCTGCGAAGAGCCAAAAGACAAGTGTCCGACTCGGTGCGACGTGAGTACCTGTCCGAGCCCCAGCTGCCCCAGCGGCTACGTGCCGGACCGCTGCAACTGCTGCCTGGTGTGCGCCCAGGGAGAGCGAGAGCCGTGCGGCCGCAAAGACGACCTGCCGTGCGGGGACGGACTGGAGTGCAAACAGCCGGCGGGCAAGCGGCTCTCCAAGGGCTTCTGTCGGTGCAGGTTCAGCGCCGAGGTGTGCGGCAGCGACGGGAAGACGTACGGCAACGTGTGCCAGCTGAAGGCGACCAGCAGGAAGGCTCTGCAGCAGGGACTACCAGGCGTCACCCAGGTCCAGAAAGGACCGTGTGAGTCCAGCACAGGTCCTTCACATGCTGCCAGTCCTCGTTACAAGTTCAACTTCATAGCCGACGTGGTGGAGAAAATCGCTCCAGCTGTGGTCCACATCGAACTCTTCCTCAgGCATCCTCTATTCGGTCGGAACATCCCTCTGTCGAGTGGGTCTGGCTTTGTGATGTCAGATAACGGACTAATTGTAACCAATGCCCATGTAGTCTCCAGCACCACACCGGTGTCCGGTCAACAGCACCTCAAGGTCCAGATGCATAACGGTGATGTATACGAAGCCAACATCAAAGACATCGACAAAAAGTCAGACATTGCTACCATCAAAATCAACTCACAGACAAAACTGCCTATATTGTTTCTGGGCCACAGTGCAGACCTGAGACCCGGGGAGTTTGTTGTTGCAATCGGCAGCCCTTTCGCCCTCCAGAACACCGTCACCACTGGCATTGTCAGCACCGCCCAGAGAGACGGCAAGGAGCTGGGCCTCAGGGACTCCGACATGGACTACATCCAGACAGACGCTATTATCAATTATGGGAATTCAGGAGGACCTCTTGTGAATTTGGATGGTGAGGTGATTGGCATCAACACCCTAAAGGTTGCAGCAGGAATCTCATTTGCCATTCCCTCCGACAGGATCACTCGCTTCCTTAATGATTCATTTGACAAGCACAGCAAAGATGTGAGGTCAATAAAGAAGCGTTTCATTGGAATTAGGATGCTGACCATCACACCAGTGTTAATTGAAGAACTAAAACAGCAGAACCCAGACTTCCCTAATGTTACCAGTGGGATTTATGTCCATGAGGTTGTTCCTCACTCACCTGCACAAAAAGGTGGTATCAAAGATGGTGACATTATTGTGAAACTGAATGGCAAACCTCTGATGGCCACAGCTGACCTACAGGGGGCACTGCAGGAGGAGACAGCCCTTCTACTGGAGGTCAGGAGGGACAATGATGACTTGCTCTTTAACATCGAACCTGACGTTATCATGCAGTAGACATTGGAAGCGATGCACTCATGCAATGTTAGACCAACATCTAAGGCCCTATTTTTGTGAAAAACCGTTGGATGGTGAAAGCTCTGCACCTTTGCAGTGAAACGTTTGTCAAGGGCACACATCTTCTGATATTTTGGCAACTGGTTGTTAACTATTACCAAAGTAAAAGGAGCCAATGGCCGACATTGTGCAATTGAGTTTGGTATCAAGGATTTACAGTCGTGCCTTCCGCCTGTTCAGACCAGGTCAATATTGGAACAGGTGCACACATGAACCCCCTACATAAACCCAAACCCCTTTTGATATATGTTATGTTTTACTTTGATTATACATTTTTCAAACAGTAATCACATTTGCTGGACAAttcccttaaaaaaaatatgatgttaATATGAGGCAAtaatggcttaaaaaaaaagcccaatatgGTGCACatcaaaaaaagataaaagcaaAGTTGGTGAATGTTATTGAATTGATAACTTGCTAataaatttaaacaaaaacaaaggtgATGATAGTGaattagcttttcagcattttgCTGACTGGGGGACATGGTGATAAGCGTTCTACAAATCCATCAAAATCCAATGACCCCTCAGTATCCATACAAGTGTACCATCCAAATTGCTTCTACTTAGATCTAGTTTGCATGGCCTGTAGTCAGCACGCAAAGTTCCCCGCCATCACATGATCCATCCGTTTGGCACTTCACCTGAGAGAGATGCAACAAAGGTTCATTGCcggcagaggtgtatagtccaggtgccagaaagtagaaatcctgtcc

Function

symbol description
htra3 Enables endopeptidase activity; identical protein binding activity; and serine-type peptidase activity. Involved in proteolysis. Predicted to be located in extracellular region.

NR:

description
PREDICTED: serine protease HTRA3

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0006508 proteolysis biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K08785 HTRA3; HtrA serine peptidase 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822977.1 True 2594 mRNA 0.49 10 5171549 5198958

Neighbor

gene id symbol gene type direction distance location
LOC120573311 LOC104940793 coding upstream 11841 5123201 ~ 5159708 (+)
cd248a NA coding upstream 223513 4944044 ~ 4948036 (+)
rce1a rce1,LOC103373256,LOC100695797 coding upstream 323378 4834682 ~ 4848171 (+)
rab1ba rab1ba,LOC103373258,LOC107679256,LOC100695098,LOC108242295 coding upstream 387104 4772175 ~ 4784445 (+)
si:ch73-40a2.1 LOC106526363,LOC108229774,LOC104948109 coding upstream 400117 4742728 ~ 4771432 (+)
mtm1 NA coding downstream 281421 5480379 ~ 5520361 (+)
mtmr1a LOC101475552,LOC100701963,LOC102291135,LOC103362109,LOC102205135 coding downstream 329945 5528903 ~ 5558688 (+)
arrb2b arrb2,LOC108434652,LOC105904870 coding downstream 388274 5587232 ~ 5602513 (+)
pelp1 LOC103362103 coding downstream 421482 5620440 ~ 5639857 (+)
alox12 alox15,LOC104937156 coding downstream 448776 5647734 ~ 5679556 (+)
G141237 LOC102291110,LOC103362116,LOC102799004,LOC102201806 non-coding upstream 55171 5109823 ~ 5116378 (+)
G141231 NA non-coding upstream 87153 5084107 ~ 5084396 (+)
G141228 LOC104956125,LOC103370120,LOC106577512 non-coding upstream 127558 5038066 ~ 5043991 (+)
G141220 NA non-coding upstream 165840 5005464 ~ 5005709 (+)
G141211 NA non-coding upstream 255639 4915499 ~ 4915910 (+)
G141258 NA non-coding downstream 5689 5204647 ~ 5204858 (+)
G141304 NA non-coding downstream 214316 5413274 ~ 5413563 (+)
G141305 NA non-coding downstream 215183 5414141 ~ 5414359 (+)
G141299 NA non-coding downstream 326453 5525411 ~ 5527470 (+)
G141295 NA non-coding downstream 361085 5560043 ~ 5568401 (+)
G141063 NA other upstream 683942 4483692 ~ 4487607 (+)
G141060 men1 other upstream 726602 4440638 ~ 4444947 (+)
zgc:112271 LOC103361642,LOC104959592,LOC100706616,LOC104935668 other upstream 856004 4313151 ~ 4315545 (+)
mllt3 mllt3 other upstream 1737746 3256513 ~ 3433803 (+)
ablim2 ablim2 other upstream 2216859 2828052 ~ 2954690 (+)
trnaw-cca_15 NA other downstream 1038045 6237003 ~ 6237074 (+)
drap1 drap1 other downstream 1372763 6571721 ~ 6578757 (+)
LOC120573071 map3k11 other downstream 1389993 6588951 ~ 6640245 (+)
LOC120573538 NA other downstream 2517646 7716604 ~ 7721656 (+)
LOC120572330 LOC107104736,LOC106920517,LOC103140598,LOC106947113 other downstream 2791240 7990198 ~ 7997708 (+)

Expression


Co-expression Network