LOC120572221


Basic Information

Item Value
gene id LOC120572221
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 37776713 ~ 37781184 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641402.1
TCGGTTATGTGGTCTTCTTGGGCGGCTTTCTGtcacgttaacgttacatttgactgtttgaaatgaacaATGCCATAAACAAAATAGATTCAGAGCTGTGCAACGGAGAGTATTTTTCACAACGAGGACATTTTTTGCGACGTGAAGGAGGAGTGGGGCGCCATTGAAGGATTGGAGCAGCACTGAACACATTTCATAATCAAGAAGACccagccagccacctctccacCTGAGGGAGAAACTGCCCAGCCCTGTCTTCCCCCAGTCAAATTACCATTCCATGTGGCAGCAGCAAGTTCCAGGTGCCATGGGAAAAAATGAGGCCCTCTCTTAAAAGAGCCATTGATGCTGGATGTTGGAGACATACCAGGAAGGTGCAGTGGCTCTGGTGGCAGTGGTCCATGAGAAGCAATTGCCTGCAGGAATCACCTTTTTCAAACTCACCACATGTCATTCATACTCAACCATCAGGTTTTAATGTGTCAGAGACCTTGGATAGATATACTGATGATTTTGTTTGCCGCTAATTATGCTTTCCAATTCAGctaccttaaaggggtgataga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641402.1 True 566 lncRNA 0.46 3 37776713 37781184

Neighbor

gene id symbol gene type direction distance location
LOC120573273 LOC108229666,LOC103129979,LOC106935074,LOC106931753,LOC108251663,LOC105418883,LOC103390035 coding downstream 83878 37679659 ~ 37692835 (-)
LOC120573284 LOC101476439,LOC102079915 coding downstream 101631 37654691 ~ 37675082 (-)
LOC120573352 NA coding downstream 209928 37562428 ~ 37566785 (-)
LOC120572649 NA coding downstream 480548 37289238 ~ 37296165 (-)
LOC120572647 hectd4 coding downstream 520680 37254159 ~ 37256033 (-)
LOC120573399 NA coding upstream 194120 37975304 ~ 37991796 (-)
LOC120573408 NA coding upstream 212593 37993777 ~ 38000091 (-)
LOC120573400 NA coding upstream 226161 38007345 ~ 38010575 (-)
LOC120573396 NA coding upstream 246751 38027935 ~ 38032102 (-)
LOC120573407 NA coding upstream 418625 38199809 ~ 38202344 (-)
G149956 NA non-coding downstream 60669 37715523 ~ 37716044 (-)
G149954 NA non-coding downstream 71000 37705512 ~ 37705713 (-)
G149946 NA non-coding downstream 124518 37650443 ~ 37652195 (-)
G149834 NA non-coding downstream 143827 37632644 ~ 37632886 (-)
G149818 NA non-coding downstream 146740 37629730 ~ 37629973 (-)
G149975 NA non-coding upstream 80670 37861854 ~ 37862674 (-)
G149986 NA non-coding upstream 105494 37886678 ~ 37907775 (-)
G149984 NA non-coding upstream 125580 37906764 ~ 37907640 (-)
G149993 NA non-coding upstream 169178 37950362 ~ 37955027 (-)
G150003 LOC101069572 non-coding upstream 254617 38035801 ~ 38045976 (-)
G149821 NA other downstream 169657 37590595 ~ 37607056 (-)
G149826 NA other downstream 173893 37600942 ~ 37602820 (-)
G149751 NA other downstream 703063 37056582 ~ 37073650 (-)
LOC120572643 NA other downstream 980585 36766349 ~ 36796128 (-)
G149706 NA other downstream 1006186 36769815 ~ 36770527 (-)
G149973 NA other upstream 62979 37844163 ~ 37899527 (-)
LOC120572652 NA other upstream 179458 37960642 ~ 37963748 (-)
LOC120573395 NA other upstream 374414 38155598 ~ 38179480 (-)
G150012 NA other upstream 465456 38246640 ~ 38278247 (-)
LOC120572653 LOC102793922,LOC108250468,LOC103389793,LOC103129600,LOC106908923,LOC101466812,LOC106943038 other upstream 705910 38487094 ~ 38541170 (-)

Expression


Co-expression Network