LOC120573408


Basic Information

Item Value
gene id LOC120573408
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 37993777 ~ 38000091 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823130.1
TCAATACTACACACTTTATACTGTTTATACTTCATCAGCCTCTACACAGCAGATGGATTTCGGATTTATGAGCTGGACCGTTGTGAGTTTAACTCGTCTGATCTGAAGGACATCGAGTTCATCAGGTCTGAATATTTCAACAAGGTGGAGCTCGCCAggttcagcagcagtttgggGAAGTTTGTTGGATACACTGAGGACGGTCTGAAACACTCTAATTACTGGAACAAAGATAATTCATTACTGGCTGGGCTGAGAGCGCTGAAGGAGACTTACTGCAAACAGCACGTTGATAATGCCTACCAGGCTGCTCTGACTAAATCAGCTGAGCCGTATGTCAGACTGAGCTCTACGGAGCCCTCTGGTGGTAAACATTCAGCCATGTTGGTCTGCAGCGTCTACGACTTCTACCCCAAACACATCAGAGTCAAGTGGACCAGAGACGGACAGGAAGTCACCTCTGATGTCACTTCCACTGATGAGCTGGCAGACGGTGATTGGTACTACCAGATCCACTCTCACCTGGAGTACACGCCCAGGTCTGGAGAGAAGATCTCCTGTATGGTGGAACACGCCAGCCTGAAAGAACCTCTGATTACTCACTGGGACCCGTCCATACCTGAGTCTGAGAGGAACAAGATTGCCATCGGAGCCTCAGGACTGATCCTGGGTCTGGTCTTATCTCTGGCTGGATTCATCTACTACAGGAGGAAGGCCCAAGGACAGATTCTGGTTCCCACTAGCTGATTCTGGACCTGGTTCTGGTCCTGTAGCTGTTTGTCAGATGGAATAAAAAGCAGCAGCTGCTTCAACCTGCTTCGTGTGTTTCAGCTCAGCAGACTGTCGGTCCTGGACCATCTTCTGGACCGACTCAACTCCTGATTCTCTGATGATCTGGACTCTGATACACAGCTGGTCTGAACCTGATCCAGGACTGTGGTGTTAGTCTGACGGTCCTGGACCAGGTCTGAACCTCATCAGAAAACTCTCTGAAACACTGTGGATTTATTGACCAGATAATAAACTGGAAGTATCTATAAAGA

Function

GO: NA

KEGG:

id description
K06752 MHC2; MHC class II antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823130.1 True 1043 mRNA 0.49 6 37993777 38000091

Neighbor

gene id symbol gene type direction distance location
LOC120573399 NA coding downstream 1981 37975304 ~ 37991796 (-)
LOC120573273 LOC108229666,LOC103129979,LOC106935074,LOC106931753,LOC108251663,LOC105418883,LOC103390035 coding downstream 300942 37679659 ~ 37692835 (-)
LOC120573284 LOC101476439,LOC102079915 coding downstream 318695 37654691 ~ 37675082 (-)
LOC120573352 NA coding downstream 426992 37562428 ~ 37566785 (-)
LOC120572649 NA coding downstream 697612 37289238 ~ 37296165 (-)
LOC120573400 NA coding upstream 7254 38007345 ~ 38010575 (-)
LOC120573396 NA coding upstream 27844 38027935 ~ 38032102 (-)
LOC120573407 NA coding upstream 199718 38199809 ~ 38202344 (-)
LOC120573402 NA coding upstream 285801 38285892 ~ 38338759 (-)
LOC120573391 LOC106532721,LOC108250468 coding upstream 475672 38475763 ~ 38487369 (-)
G149993 NA non-coding downstream 38750 37950362 ~ 37955027 (-)
G149986 NA non-coding downstream 86002 37886678 ~ 37907775 (-)
G149984 NA non-coding downstream 86137 37906764 ~ 37907640 (-)
G149975 NA non-coding downstream 131103 37861854 ~ 37862674 (-)
LOC120572221 NA non-coding downstream 212593 37776713 ~ 37781184 (-)
G150003 LOC101069572 non-coding upstream 35710 38035801 ~ 38045976 (-)
LOC120573409 NA non-coding upstream 137512 38137603 ~ 38143291 (-)
G150021 NA non-coding upstream 322480 38322571 ~ 38323111 (-)
G150029 NA non-coding upstream 347474 38347565 ~ 38347971 (-)
G149996 NA non-coding upstream 352390 38352481 ~ 38357036 (-)
LOC120572652 NA other downstream 30029 37960642 ~ 37963748 (-)
G149973 NA other downstream 94250 37844163 ~ 37899527 (-)
G149821 NA other downstream 386721 37590595 ~ 37607056 (-)
G149826 NA other downstream 390957 37600942 ~ 37602820 (-)
G149751 NA other downstream 920127 37056582 ~ 37073650 (-)
LOC120573395 NA other upstream 155507 38155598 ~ 38179480 (-)
G150012 NA other upstream 246549 38246640 ~ 38278247 (-)
LOC120572653 LOC102793922,LOC108250468,LOC103389793,LOC103129600,LOC106908923,LOC101466812,LOC106943038 other upstream 487003 38487094 ~ 38541170 (-)
G150174 NA other upstream 528826 38528917 ~ 38533300 (-)
LOC120572655 NA other upstream 561178 38561269 ~ 38635593 (-)

Expression


Co-expression Network