G150029


Basic Information

Item Value
gene id G150029
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 38347565 ~ 38347971 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU202986
gtctcgccttaaACCATCAGAGATTATATCAGACTGGATCTTACCGTCTGctgagacacagaggagaccagagaggaccaggaccaggaccaccatcatcttcatcatcttcatcatcttcatcagctTCATCTCTCTGTAGACCTGAACCTGTCTGAGTCTCTGTAGACCTGAACCTGTCTGAGTCTCTGTAGACCTGAACCTGTCTGAGTCTCTGTAGACctgaacctgtctgtctctctgtagacctgaacctgtctgtctctctgtagacCTGAACCTGTCTGAGTCTCTCTGTAGACctgaacctgtctgtctctctgtagacctgaacctgtctgtctctgtagacctgaacctgtctgtctctctgtagacCTGGACC
>TU202987
gtctcgccttaaACCATCAGAGATTATATCAGACTGGATCTTACCGTCTGctgagacacagaggagaccagagaggaccaggaccaggaccaccatcatcttcatcatcttcatcatcttcatcagctTCATCTCTCTGTAGACCTGAACCTGTCTGAGTCTCTGTAGACCTGAACCTGTCTGAGTCTCTGTAGACCTGAACCTGTCTGAGTCTCTGTAGACctgaacctgtctgtctctctgtagacctgaacctgtctgtctctctgtagacCTGAACCTGTCTGAGTCTCTgtagacctgaacctgtctgtctctctgtagacCTGGACC
>TU202988
gtctcgccttaaACCATCAGAGATTATATCAGACTGGATCTTACCGTCTGctgagacacagaggagaccagagaggaccaggaccaggaccaccatcatcttcatcatcttcatcatcttcatcagctTCATCTCTCTGTAGACCTGAACCTGTCTGAGTCTCTGTAGACCTGAACCTGTCTGAGTCTCTGTAGACCTGAACCTGTCTGAGTCTCTGTAGACctgaacctgtctgtctctctgtagacctgaacctgtctgtctctctgtagacctgaacctgtctgtctctctgtagacCTGGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU202986 True 385 lncRNA 0.49 2 38347565 38347971
TU202987 False 333 lncRNA 0.49 3 38347565 38347971
TU202988 False 307 lncRNA 0.49 2 38347565 38347971

Neighbor

gene id symbol gene type direction distance location
LOC120573402 NA coding downstream 8806 38285892 ~ 38338759 (-)
LOC120573407 NA coding downstream 145221 38199809 ~ 38202344 (-)
LOC120573396 NA coding downstream 315463 38027935 ~ 38032102 (-)
LOC120573400 NA coding downstream 336990 38007345 ~ 38010575 (-)
LOC120573408 NA coding downstream 347474 37993777 ~ 38000091 (-)
LOC120573391 LOC106532721,LOC108250468 coding upstream 127792 38475763 ~ 38487369 (-)
LOC120573401 NA coding upstream 213991 38561962 ~ 38565649 (-)
LOC120572654 rbm46,LOC102795526 coding upstream 258318 38606289 ~ 38627304 (-)
LOC120572225 LOC104940940 coding upstream 387213 38735184 ~ 38743390 (-)
cfi NA coding upstream 445591 38793562 ~ 38816682 (-)
G150021 NA non-coding downstream 24454 38322571 ~ 38323111 (-)
LOC120573409 NA non-coding downstream 204274 38137603 ~ 38143291 (-)
G150003 LOC101069572 non-coding downstream 301589 38035801 ~ 38045976 (-)
G149993 NA non-coding downstream 392538 37950362 ~ 37955027 (-)
G149986 NA non-coding downstream 439790 37886678 ~ 37907775 (-)
G149996 NA non-coding upstream 4510 38352481 ~ 38357036 (-)
LOC120573412 NA non-coding upstream 40639 38388610 ~ 38391664 (-)
G150057 NA non-coding upstream 107040 38455011 ~ 38457594 (-)
LOC120573413 NA non-coding upstream 143976 38491947 ~ 38493628 (-)
G150170 NA non-coding upstream 149694 38497665 ~ 38501382 (-)
G150012 NA other downstream 69318 38246640 ~ 38278247 (-)
LOC120573395 NA other downstream 168085 38155598 ~ 38179480 (-)
LOC120572652 NA other downstream 383817 37960642 ~ 37963748 (-)
G149973 NA other downstream 448038 37844163 ~ 37899527 (-)
G149826 NA other downstream 744745 37600942 ~ 37602820 (-)
LOC120572653 LOC102793922,LOC108250468,LOC103389793,LOC103129600,LOC106908923,LOC101466812,LOC106943038 other upstream 139123 38487094 ~ 38541170 (-)
G150174 NA other upstream 180946 38528917 ~ 38533300 (-)
LOC120572655 NA other upstream 213298 38561269 ~ 38635593 (-)
G150192 NA other upstream 263684 38611655 ~ 38689593 (-)
lratb.1 LOC101070953,LOC108248302,LOC106910222,LOC103149051,LOC103367949,LOC106949946,LOC107082284 other upstream 296595 38644566 ~ 38671813 (-)

Expression


Co-expression Network