RNA id: TU202988


Basic Information

Item Value
RNA id TU202988
length 307
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G150029
representative False

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 38347565 ~ 38347971 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtctcgccttaaACCATCAGAGATTATATCAGACTGGATCTTACCGTCTGctgagacacagaggagaccagagaggaccaggaccaggaccaccatcatcttcatcatcttcatcatcttcatcagctTCATCTCTCTGTAGACCTGAACCTGTCTGAGTCTCTGTAGACCTGAACCTGTCTGAGTCTCTGTAGACCTGAACCTGTCTGAGTCTCTGTAGACctgaacctgtctgtctctctgtagacctgaacctgtctgtctctctgtagacctgaacctgtctgtctctctgtagacCTGGACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU202977 lncRNA downstream 24454 38322571 ~ 38323111 (-) True G150021
TU202978 lncRNA downstream 24454 38322571 ~ 38323111 (-) False G150021
XR_005641708.1 lncRNA downstream 204274 38137603 ~ 38143291 (-) False LOC120573409
TU202948 lncRNA upstream 4510 38352481 ~ 38357036 (-) True G149996
XR_005641720.1 lncRNA upstream 40639 38388610 ~ 38391664 (-) True LOC120573412
TU203017 lncRNA upstream 107040 38455011 ~ 38457594 (-) False G150057
TU203019 lncRNA upstream 107040 38455011 ~ 38457594 (-) False G150057
TU203020 lncRNA upstream 107040 38455011 ~ 38455411 (-) False G150057
XM_039823121.1 mRNA downstream 8806 38285892 ~ 38338759 (-) False LOC120573402
XM_039823119.1 mRNA downstream 53374 38285892 ~ 38294191 (-) True LOC120573402
XM_039823120.1 mRNA downstream 53625 38285892 ~ 38293940 (-) False LOC120573402
XM_039823129.1 mRNA downstream 145221 38199809 ~ 38202344 (-) True LOC120573407
XM_039823111.1 mRNA downstream 168086 38170079 ~ 38179479 (-) False LOC120573395
XM_039823104.1 mRNA upstream 127792 38475763 ~ 38487369 (-) True LOC120573391
XM_039823105.1 mRNA upstream 127792 38475763 ~ 38485653 (-) False LOC120573391
XM_039821971.1 mRNA upstream 139123 38487094 ~ 38505625 (-) True LOC120572653
XM_039823118.1 mRNA upstream 213991 38561962 ~ 38565649 (-) True LOC120573401
XM_039821972.1 mRNA upstream 258318 38606289 ~ 38627304 (-) True LOC120572654
TU202965 other downstream 69318 38246640 ~ 38278247 (-) True G150012
XR_005641707.1 other downstream 168085 38169493 ~ 38179480 (-) False LOC120573395
TU203204 other upstream 139997 38487968 ~ 38541170 (-) False LOC120572653
TU203205 other upstream 139997 38487968 ~ 38505641 (-) False LOC120572653
TU203212 other upstream 180946 38528917 ~ 38533300 (-) True G150174
TU203219 other upstream 213298 38561269 ~ 38633052 (-) False LOC120572655
TU203233 other upstream 263684 38611655 ~ 38689593 (-) True G150192

Expression Profile