G154227


Basic Information

Item Value
gene id G154227
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12067737 ~ 12068752 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU208963
TGGGGCTTCCTTTTTCACTATTGCAGGGGCTGAGGGTGGGATTGCAGCTCTGCGAGCCAATCAGCTGAGTCATGTAGGTGCTGTACTCCAATAGTGTTCTTGTTTTTATAGCTCCCAGAAAGTCGTGCAGCTCTTCTGTGCTTTCTTTAGCACCGTCTCCACCACATGGTGTTTCTGAGTGACaaagagaaaagacagacatGAAGTAAGTGGGCCGAAGGAGCTGGTAAACATAACTCAAAGACTCACAGAAACAGTACAATTCTGAGCATCAATCTTTCCTGCACTCAATTCAACTCGACGACTGTATGcatgtttaaaacaaactaaattGCTCCCAACCACCATAACTCCAAACACTGTCTTACCTGCATTCTCCTCCCTGCTTACACTGCTCTTGGCTGCAGACAGGAAGTGCTGGAACcactcctccttttctcttcctGTGCGGCCAAACAGGTACAGGGTGACAGGAAAATGGGGGTCCTGAATGACGTGTCTCTCTGccctttcttcctcctcctgcccTTCAACCATACTCTCCTCCCCTACCTCTCCTTCAGCCAAAGTGATGCAAATGGGGTACTTCCTGTTCCAGATCCTCTTGCGGGCCAAACCAGGTGGCAACAGAGACACCTGAGATTAAAAGTAACGGAAAGGAATGATAAAGGAAAAgtgtccttttttttaaatctatatttttttctacaagAGATGCTGGCAGGCAGACATTTGGTTGATAGGTCGCCATTGCCAAAGTGCTTGGCACATTGATTAGATTGTGTGTTGTGCTTTATTCTATCACCCTATTGGAAGCTAGTGCAGCAGCTGCCTCAATATGCTACTGGGACAGTAGCCGGGTCAAGTTTATTCAGAGCATCATCACTTTAGTCGTAATCCTTCGGTCTTTCACCTCCGTGTTAGATGACAATGTGGGTGCAGAGAGATAAGAGTTCAGGCGAGAGGTCATCTTCTCTTTCACTCCCCTCTGAGGAGGGACATGCCTGCTCCCCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208963 True 1016 lncRNA 0.47 1 12067737 12068752

Neighbor

gene id symbol gene type direction distance location
LOC120573979 rpl3l,LOC102799413 coding upstream 4676 12058647 ~ 12063061 (+)
rps2 rps2,LOC104918830 coding upstream 12555 12052727 ~ 12055182 (+)
rnf151 rnf151,LOC102775723,LOC100708193 coding upstream 15505 12049325 ~ 12052232 (+)
noxo1a NA coding upstream 40536 12023082 ~ 12027201 (+)
gid4 gid4 coding upstream 48621 12013852 ~ 12019116 (+)
LOC120573928 hs3st6 coding downstream 39108 12107860 ~ 12120826 (+)
LOC120575138 hagh,LOC100699784,LOC107092812 coding downstream 60039 12128791 ~ 12133455 (+)
LOC120575115 haghl,LOC100699516,LOC104918824,LOC101076411 coding downstream 65220 12133972 ~ 12137255 (+)
e4f1 e4f1 coding downstream 74708 12143460 ~ 12150996 (+)
grid2ipa LOC103361735,LOC102310441,LOC102202691,LOC102796762 coding downstream 82544 12151296 ~ 12177758 (+)
G154226 NA non-coding upstream 2229 12065280 ~ 12065508 (+)
G154225 LOC105933046,LOC101076874,LOC102218385,LOC106948144,LOC103469244,LOC103141651 non-coding upstream 3465 12063970 ~ 12064272 (+)
G154215 NA non-coding upstream 47229 12020278 ~ 12020508 (+)
G154204 NA non-coding upstream 92025 11975019 ~ 11975712 (+)
G154193 srebf1 non-coding upstream 96462 11926121 ~ 11971275 (+)
G154297 NA non-coding downstream 118871 12187623 ~ 12190042 (+)
G154307 NA non-coding downstream 148124 12216876 ~ 12218005 (+)
LOC120574756 NA non-coding downstream 272648 12341400 ~ 12342350 (+)
G154367 NA non-coding downstream 332978 12401730 ~ 12401983 (+)
G154379 NA non-coding downstream 407015 12475767 ~ 12523672 (+)
LOC120574068 NA other upstream 842488 11207041 ~ 11225249 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other upstream 993911 11063859 ~ 11073826 (+)
G153808 spag9 other upstream 1314839 10752160 ~ 10752898 (+)
G153646 NA other upstream 1726114 10250377 ~ 10341623 (+)
G153433 NA other upstream 2000995 10065460 ~ 10066742 (+)
G154254 NA other downstream 17109 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other downstream 20621 12089373 ~ 12093558 (+)
G154461 NA other downstream 774671 12843423 ~ 12846597 (+)
LOC120574968 LOC102294452 other downstream 948207 13016959 ~ 13026416 (+)
vasnb vasn other downstream 1587263 13656015 ~ 13692303 (+)

Expression


Co-expression Network