G154777


Basic Information

Item Value
gene id G154777
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14049831 ~ 14056966 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU209761
AAGCAACAAACACATagtagCTTTATTGCGTCAAAAAGACGCATAATTAATGATGAAGCTACATGCTCAAATTAATGTCTATGACTAGTAGGCTGATTAAAAAAGGCTTTAAGCCGGTATTTCATAATCAATTCATTTTATTACAAAATAGGAATATTGAAATATATCACAAGATGAGAACATGATACATTGAAAACCTCCATTCAATACAAATAGTAGGTCTACATAACCAAGTTCGCAACGCAAACAAGGACAAAATACGGACATTATGTGAGGTTCAAAAACATCACTGTGATGCAACTGAGGAAACATAAGTCCTTGGCAATTTAAACGTGCATCCCATCCAGGATTCTTGAATCCCACCTCTGGTCCGTGGGTGAGGATGAAAACAAACGTGACGTCCCTAATGCACCTCGAGTGTGTGAGATTCCTCCAGTCAGTAATCCAGACTTCCGTTTCATGATGCTTTTGGCACGTCAAACATGCACAGACTTTTGTATTTCTGCAGCAGCTGGTTCTTGGTGCGGACCTGCTCCCGCAGCGTagccagctgctgctgctgctccagcGGACTGCTGTCTACCCCGGGCATGTTAGATATCTGCTCCCGAGCCTCCTGGATCTTTGTCTTCAGCTTGGCCAGTTCTTGGTGAACATCCTGGCTGTCCTTGT
>TU209762
CGGACATTATGTGAGGTTCAAAAATATGATACATTGAAAACCTCCATTCAATACAAATAGTAGGTCTACATAACCAAGTTCGCAACGCAAACAAGGACAAAATACGGACATTATGTGAGGTTCAAAAACATCACTGTGATGCAACTGAGGAAACATAAGTCCTTGGCAATTTAAACGTGCATCCCATCCAGGATTCTTGAATCCCACCTCTGGTCCGTGGGTGAGGATGAAAACAAACGTGACGTCCCTAATGCACCTCGAGTGTGTGAGATTCCTCCAGTCAGTAATCCAGACTTCCGTTTCATGATGCTTTTGGCACGTCAAACATGCACAGACTTTTGTATTTCTGCAGCAGCTGGTTCTTGGTGCGGACCTGCTCCCGCAGCGTagccagctgctgctgctgctccagcGGACTGCTGTCTACCCCGGGCATGTTAGATATCTGCTCCCGAGCCTCCTGGATCTTTGTCTTCAGCTTGGCCAGTTCTTGGTGAACATCCTGGCTGTCCTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209761 True 672 lncRNA 0.43 2 14049831 14056966
TU209762 False 516 lncRNA 0.48 2 14050092 14056966

Neighbor

gene id symbol gene type direction distance location
LOC120574849 rasd1,LOC101484812,LOC104918344,LOC106942351,LOC103468867,LOC103373502,LOC103140985,LOC103393006 coding upstream 394 14048086 ~ 14049437 (+)
LOC120575215 sox8 coding upstream 49155 13996902 ~ 14000676 (+)
LOC120575449 adap1,LOC103363436,LOC106518683,LOC108241370 coding upstream 165505 13867284 ~ 13884326 (+)
LOC120575450 rnps1,LOC104933647,LOC103363435 coding upstream 183275 13863511 ~ 13866556 (+)
LOC120575448 NA coding upstream 202923 13840149 ~ 13846908 (+)
LOC120574464 LOC104918338,LOC103373486,LOC103393004,LOC106518679,LOC108241369,LOC103140983 coding downstream 9820 14066786 ~ 14096876 (+)
LOC120575371 LOC104945238 coding downstream 371151 14428117 ~ 14429657 (+)
syngr2a LOC103373322 coding downstream 488688 14545654 ~ 14549374 (+)
cant1a NA coding downstream 496203 14553169 ~ 14558801 (+)
LOC120574730 NA coding downstream 501863 14558829 ~ 14562753 (+)
LOC120575454 NA non-coding upstream 95108 13946606 ~ 13954723 (+)
G154682 NA non-coding upstream 457197 13589517 ~ 13592634 (+)
G154661 LOC106942609 non-coding upstream 555970 13492585 ~ 13493861 (+)
G154639 NA non-coding upstream 565113 13484039 ~ 13484718 (+)
G154634 crebbp,LOC108247643,LOC106518707 non-coding upstream 574383 13474159 ~ 13475448 (+)
LOC120575155 NA non-coding downstream 50815 14107781 ~ 14241105 (+)
G154811 NA non-coding downstream 228208 14285174 ~ 14287984 (+)
G154824 NA non-coding downstream 269316 14326282 ~ 14326489 (+)
G154872 LOC104945235 non-coding downstream 380510 14437476 ~ 14439147 (+)
G154875 NA non-coding downstream 386126 14443092 ~ 14444138 (+)
G154743 LOC102293104 other upstream 195545 13847139 ~ 13854286 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other upstream 268146 13769019 ~ 13781685 (+)
trnat-agu_6 NA other upstream 280055 13769703 ~ 13769776 (+)
vasnb vasn other upstream 357528 13656015 ~ 13692303 (+)
LOC120574968 LOC102294452 other upstream 1023415 13016959 ~ 13026416 (+)
si:dkey-282h22.5 NA other downstream 924270 14981236 ~ 14984745 (+)
LOC120574428 NA other downstream 928734 14985700 ~ 14986913 (+)
LOC120575440 LOC102304323 other downstream 935047 14992013 ~ 14992508 (+)
G155088 NA other downstream 1078825 15135791 ~ 15139706 (+)
ndel1b ndel1,LOC104940291 other downstream 1309954 15366920 ~ 15404605 (+)

Expression


Co-expression Network