G154883


Basic Information

Item Value
gene id G154883
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14470512 ~ 14470987 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU209890
CTGGTCTCGCTAAACCGCTGCCTCGGCTTGCGCTTGCTCCTTTTCACAACGAGGTGATGAAGCAGCAGGTTTGAACAGCAAGAAGCGCATGAGTTGACAAGCCACCAAGAAGCGCTGTCATACAGTGGACACGCGACGTCTTGGCAAACTATGTATCACAAAAGCAACCAGTTACACAGTTTTGTCATTCCACGGCTCTGTCTCCGACCTCTCAACGCCTGCTTGTGAAAGTGGCAAACAACTCCCCGCTTACAAAACAAGCAGGCGAGGAAATCCCCGTGCTCAGCCTTCCTACTAGAACTGTAGCAGTTCAGCACCACGAGCGAATTCCTCACCGGGGAAATCGCCGTTTACGCGCGAAACCACCTGCCGTTGCGTTACATCAAACCCAAAATCTGAATGGCATGTTTTACTCGCAGCTCATGAGTGTACAAATGCTTAGCTGCCATCTCAGCATAGTAGGAGCCCGACCGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209890 True 476 lncRNA 0.52 1 14470512 14470987

Neighbor

gene id symbol gene type direction distance location
LOC120575371 LOC104945238 coding upstream 40855 14428117 ~ 14429657 (+)
LOC120574464 LOC104918338,LOC103373486,LOC103393004,LOC106518679,LOC108241369,LOC103140983 coding upstream 373636 14066786 ~ 14096876 (+)
LOC120574871 rasd1,LOC101484812,LOC104918344,LOC106942351,LOC103468867,LOC103373502,LOC103140985,LOC103393006 coding upstream 414669 14054552 ~ 14055843 (+)
LOC120574849 rasd1,LOC101484812,LOC104918344,LOC106942351,LOC103468867,LOC103373502,LOC103140985,LOC103393006 coding upstream 421075 14048086 ~ 14049437 (+)
LOC120575215 sox8 coding upstream 469836 13996902 ~ 14000676 (+)
syngr2a LOC103373322 coding downstream 74667 14545654 ~ 14549374 (+)
cant1a NA coding downstream 82182 14553169 ~ 14558801 (+)
LOC120574730 NA coding downstream 87842 14558829 ~ 14562753 (+)
timp2b LOC103373294,LOC104925068 coding downstream 102413 14573400 ~ 14581660 (+)
usp36 usp36 coding downstream 111616 14582603 ~ 14601556 (+)
G154881 NA non-coding upstream 7049 14463262 ~ 14463463 (+)
G154880 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 non-coding upstream 11359 14454839 ~ 14459153 (+)
G154875 NA non-coding upstream 26374 14443092 ~ 14444138 (+)
G154872 LOC104945235 non-coding upstream 31365 14437476 ~ 14439147 (+)
G154824 NA non-coding upstream 144023 14326282 ~ 14326489 (+)
LOC120575161 NA non-coding downstream 259631 14730618 ~ 14738716 (+)
G154982 NA non-coding downstream 358515 14829502 ~ 14830164 (+)
G155032 LOC104944234,LOC102212559,LOC101473443,LOC102786862,LOC102303581 non-coding downstream 481346 14952333 ~ 14954301 (+)
G155036 ccdc137 non-coding downstream 496956 14967943 ~ 14969536 (+)
G155040 NA non-coding downstream 500265 14971252 ~ 14971468 (+)
G154743 LOC102293104 other upstream 616226 13847139 ~ 13854286 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other upstream 688827 13769019 ~ 13781685 (+)
trnat-agu_6 NA other upstream 700736 13769703 ~ 13769776 (+)
vasnb vasn other upstream 778209 13656015 ~ 13692303 (+)
LOC120574968 LOC102294452 other upstream 1444096 13016959 ~ 13026416 (+)
si:dkey-282h22.5 NA other downstream 510249 14981236 ~ 14984745 (+)
LOC120574428 NA other downstream 514713 14985700 ~ 14986913 (+)
LOC120575440 LOC102304323 other downstream 521026 14992013 ~ 14992508 (+)
G155088 NA other downstream 664804 15135791 ~ 15139706 (+)
ndel1b ndel1,LOC104940291 other downstream 895933 15366920 ~ 15404605 (+)

Expression


Co-expression Network