G155197 (LOC104918611,LOC104960327,LOC102777936,LOC100691075,LOC101487576)


Basic Information

Item Value
gene id G155197
gene name LOC104918611,LOC104960327,LOC102777936,LOC100691075,LOC101487576
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 15507053 ~ 15508319 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU210325
AAAGAGGGGTGGAGAGTTCTTTATGATGATGAAAGTCTTACAGTCTGATTTATTACTCTTTTCATACCAGATACATAACAAATACAGCAGGTCAGGACAAACACTTTGGTTCATTCCAGGATTTATTGTTGGCTAAGCAGAGGATATTAAATATATAGGATTCATAAATGCAGCAacattttgtatgtgtatgtagtgTTTTAGTCTGCGTGACATCAATAGTTAGGCTATGGTGTAgataaaagtataaagtaatgCATTCACTGGGAAAATCCGATGTCATTTGCACAGCAGTACAATTCAGTCGGATGCTGGTTAAATGCAGGCAATGAAAATGTGTAAGGTTTTGATGCATACCAAAGCATACTCAGCTTCAGACCAATTTGTTCTTCTAACTGACAAGCAAGCCTGATAAAGAATATCCATAACACATTGCTTGCTCTTCCACATgcagaaaatgtttaaaaacaagttttaaGTTGGTCCAGACCTGAGGTTTTGGTTTGTGgtaagcctttttttttaaacagtattGCATGTTAAGGTTTATGTTTGTAGGCAACCTACACAGAAGTCAGTGTAGAAAATActgaatttaaatatatatatatatattcgttCAAACACAGAATTTCAGATAGTAACTGAAAGATGTGGATTTTGGAAGCAGGTTGGTGTAGGTAGAGCAGACAGGGTAGAAATATTTTGTTATGTTGATTCTGTATTGTCTACACAATATAACATACATTACAATGTTATAGTATTATGTTTAGTCTCTTCAACAATTAGCcatattattttggtcaattaaCATCTgtcaatatatacatatatttggtTTTAGTTTAAGATTGTTAAGCTTTCTACAAGTAAATGTGAGTGCAATTATTTCAGTAGGTTCTTCATAATACTTATTGAAGAGCCCCTGTAGCCACCACCAAAGTGGTTCCAGTGATTCAGATAGTGGAAGAGTTGGTAAAGCTGGTTTCTCTTTGCAAAGCCTGGTGCTTGAGGAATCTTGTCATGGTAAGCAGAGTAAAAAGAGCTGTTGAAGCCACCAAACATCCCTGCAATACCCAGCTCATACTCTGAATGGCCATAGAAGGAGGCTGGGTCAAAGATGACTGGGCCCATCGTACACTGTGCTACGTTGCCTCCCCATAGGTCTCCATGGAGGAGAGCAGGAACAATCTCTACATCTTTGA

Function

NR:

description
PREDICTED: ketosamine-3-kinase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210325 True 1205 lncRNA 0.37 2 15507053 15508319

Neighbor

gene id symbol gene type direction distance location
znf750 NA coding upstream 7547 15495687 ~ 15499506 (+)
atp5pd atp5h,LOC103361245,LOC101487002 coding upstream 73766 15428818 ~ 15433287 (+)
arhgap44a LOC103361248 coding upstream 116523 15360766 ~ 15390530 (+)
LOC120575445 LOC104940295,LOC103361241,LOC104959451 coding upstream 193482 15310845 ~ 15313571 (+)
cdc42ep4a LOC104940296,LOC100697350,LOC103361240,LOC102780692 coding upstream 213082 15280641 ~ 15293971 (+)
LOC120575067 NA coding downstream 27373 15535692 ~ 15537840 (+)
btr02 LOC104960320,LOC103356290,LOC100690538,LOC106529769 coding downstream 29302 15537621 ~ 15541106 (+)
cldnk LOC106925874,LOC103468796,LOC106529779,LOC106946608 coding downstream 34628 15542947 ~ 15543867 (+)
hgs hgs coding downstream 37497 15545816 ~ 15557017 (+)
mrpl12 mrpl12 coding downstream 50999 15559318 ~ 15563403 (+)
G155180 metrnl non-coding upstream 57495 15446884 ~ 15449558 (+)
G155104 NA non-coding upstream 333690 15173092 ~ 15173363 (+)
G155077 NA non-coding upstream 391605 15055351 ~ 15115448 (+)
G155050 NA non-coding upstream 503407 15001008 ~ 15003646 (+)
G155041 NA non-coding upstream 535263 14971522 ~ 14971790 (+)
G155212 NA non-coding downstream 35923 15544242 ~ 15544549 (+)
G155257 NA non-coding downstream 153049 15661368 ~ 15731815 (+)
G155346 NA non-coding downstream 382776 15891095 ~ 15892034 (+)
G155342 adgrl1,LOC103392844 non-coding downstream 385555 15893874 ~ 15900522 (+)
G155384 NA non-coding downstream 650332 16158651 ~ 16201112 (+)
ndel1b ndel1,LOC104940291 other upstream 102448 15366920 ~ 15404605 (+)
G155088 NA other upstream 367347 15135791 ~ 15139706 (+)
LOC120575440 LOC102304323 other upstream 514545 14992013 ~ 14992508 (+)
LOC120574428 NA other upstream 520140 14985700 ~ 14986913 (+)
si:dkey-282h22.5 NA other upstream 522308 14981236 ~ 14984745 (+)
arl16 arl16 other downstream 1774 15510093 ~ 15512810 (+)
rasd2 NA other downstream 18535 15526854 ~ 15528470 (+)
LOC120574525 NA other downstream 378856 15887175 ~ 15891028 (+)
LOC120574544 pet100 other downstream 751365 16259684 ~ 16262058 (+)
camsap3 NA other downstream 807513 16315832 ~ 16387522 (+)

Expression


Co-expression Network