G156128 (wnt9b)


Basic Information

Item Value
gene id G156128
gene name wnt9b
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 18430906 ~ 18434691 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU211637
aaatacatttggaaTCTGGAGATATGTATTACCAAATTCAAAAGAACTGtacaaaaatctaaaatatgatCTTTTGAAAACTAATGCAAAGGACAGGACATAATTCTGCATAGCTCGTAAATCTTACTGATATTTGCCAAAAGATGAAGTGAGGTAGAAAAATACGATTCCACATTGTCATATGCCTGGAGCCCTGACATGAGTTGTATTCATAtcgtatatatatacagtttagaatcactcaaacaaaacataaactggCCAATAAAATAAACCCTTGGGTGTAACGTGCACTTTTGACTTGCACAAATGGACGCATGAGAGTTGTCTTGGATGTAAGGATAAGTGAGTAAACATGGGGATTTTCCTTGATTAGCAATTTGGGAAAATGAGGAGCACGATTAGCCCACTTCAAAGGCATTTTGGAACAAAGATGTGGCTAAATTAGACTTTGAAGACCAAATAGTTCTGGCAGGCAATTTTAAACTTGAAAGTATAGCATTGTGTGTGCTTCTATAAATAGAAGAAATACAAGAGGAGGGGTGGTATGTTCAGAAATGAAGCgtttttcattcttttgtttaTCAAAGACACTGTTTGGTGTTTCCCTCACTATTACCCCGTGTAGTTCCCTTTGTTCTGTTGAGCAGACATTAGGCTACATGTAGAGATTTCCATAGACATTTCCATAAGAGCAACTGAAACCCAGCTTGTTTCTTTACACAATAACCCTGTTAATGCTTGTAACAATGTATATCAGTGGCACCCCTCAAAGCTTCCAGTGATTCTGTTTAAACATAAATTTAGACCAATAGATTTTTCTAACGTCTATGATTAATTATATACTTTGTATCATATGTAGCAAGAGCAACTTAAGTGCTTTTTAATCAGAAATGAACGCCTAACATTTCTCCacagcagacagaaagacagacaggtggaTTCCTTTTAAGGCAATTTTAGCCTTAGTGGCAATTACAAGAAGGTTAAAGTATAAAGCAGCAGTACAACAGATACAATGACTGATACAATAAATAGTCAAGTGGAAGGGGCCAACGTAATTACAATACAACAAAGTCAGTGTCAAGAGATCCCCTGCAGACGGGGGTCTGACGTCGTACTGCTGGTGACGTCCAGTCCAGTACCTGTTTTAAGAGCTCATTTCCCCTACGTCCCAGAGGAGTGGGAATTCAGTGCATCCAGCAAGAGAAAAGCAGAGTAGTTTGAAAACATCCTCACCTACAGTAAGCTGCTGCGTATCAAATCGGTGATGATTAGCAAATAACCAGCAATATTATAATGTTACAAGTGTCTATTCCTCCCCAAATCACATGCAGGCCAGACTGGAGATCTGCAAAGACACGCTCTGGTGTGAGATCCCTCAGTGAATTGTCTATAGGAGCTTATAGTTCAGCCATGTCAATACAGTATGTCTGGTCAATGATGAACTCACTTTGTCTCTCTCATATTTCTTCTCTCTTATTATTTGTTATGCGTTTTTGCAGGTGtacacctcctcctctctcacacATGTCTGACACTCCACGTGGCAGCACCAGCGTACCTGGCAGTGGCAGGACAGGCTGGTGAGGCGCATGGCTGTGTTGTAACCACGTCCGCAGCACAGACTCTGACAACTGGTGTCTTTGGCACACGACCGGCCGCCTGTACCCGGGGAGTAGCGCGAGGGCCTGCAGAAGCTGGGGGAGTCTTCCAGGTAGACCAGGTCAGTAGTACGAAGGCTCTGGCCGTGGCGACGGGGCCCAGCGAGCTCCGTCTCCCCGGTGGCTGCGTTGGTGACACTCAGCACTCGCACCGCGGTGTCATACCTGTACTTCAGCAGCCGTCCAGTGTCATGGAAAGGAGACAGCTGCTTCCAGCAAGTCCGTACGGCACAAGAGCCGGAGACACCGTGACACTTGCAGGTTGTTTTCAGCCCACTCTTCACTGCCCGAATTCCAACGTTGATGTTGTGGGCGTCAACTTGAGCCCTCAGGTCCTTGCTGACCTTCTTTTGGCCGAGGAACTTCTTGAGAAACTTGGTGCTATATTTCAGGTTGTCCCCGCAGACCCCCCACTGCCACGCTTCTCGATGCTGGATGCCGGGGGAGTCGTCACATGTGCACCTCTCCATTCGGCCTGAGCTGCACGCTTTGGCGAGTGCATGGGTTAGCGCCGCAGAGGACACTGCCAGTAGGAAGGCAGTCTCCTTGAATGCTGGGATAGATGTAAAAGACAGAGGAGGTGGATTAATGTTGTGtaaacatttttaatgtttaaatgtaaatttgtctatATCTAGGACCGATTTAAAGAGCTGAATTTACAAAGCTTTTAATGCAAG

Function

symbol description
wnt9b Predicted to enable cytokine activity and frizzled binding activity. Predicted to be involved in canonical Wnt signaling pathway; cell fate commitment; and neuron differentiation. Predicted to act upstream of or within Wnt signaling pathway. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including apical ectodermal ridge; fin; head; otic vesicle; and pericardial region. Orthologous to human WNT9B (Wnt family member 9B).

NR:

description
PREDICTED: protein Wnt-9b

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211637 True 2344 lncRNA 0.44 2 18430906 18434691

Neighbor

gene id symbol gene type direction distance location
gpatch8 gpatch8,LOC102799714 coding upstream 12992 18387583 ~ 18417914 (+)
pts pts coding upstream 44857 18383707 ~ 18386049 (+)
trnac-gca_25 NA coding upstream 102342 18328493 ~ 18328564 (+)
trnac-gca_24 NA coding upstream 103861 18326974 ~ 18327045 (+)
trnac-gca_23 NA coding upstream 105506 18325329 ~ 18325400 (+)
arf2a LOC101068594,LOC106537332,LOC101167961,LOC107378475,LOC103374234,LOC102228520,LOC105937532,LOC108246146 coding downstream 3871 18438562 ~ 18446843 (+)
si:ch211-278a6.1 NA coding downstream 33375 18468066 ~ 18585307 (+)
tubg1 tubg1,LOC103376177 coding downstream 198334 18633025 ~ 18640301 (+)
cntnap1 cntnap1 coding downstream 256838 18691529 ~ 18712797 (+)
ramp2 NA coding downstream 297012 18731703 ~ 18736392 (+)
LOC120574045 NA non-coding upstream 7017 18421999 ~ 18423889 (+)
G156126 gosr2 non-coding upstream 10513 18419697 ~ 18420393 (+)
G156114 NA non-coding upstream 98029 18332528 ~ 18332877 (+)
G156113 NA non-coding upstream 104210 18326330 ~ 18326696 (+)
G156053 NA non-coding upstream 250824 18179768 ~ 18180082 (+)
G156155 mtdh non-coding downstream 186516 18621207 ~ 18621471 (+)
G156222 NA non-coding downstream 278516 18713207 ~ 18796255 (+)
G156248 NA non-coding downstream 508679 18943370 ~ 18944173 (+)
G156253 hsd17b1 non-coding downstream 518984 18953675 ~ 18955144 (+)
G156264 atp6v0a1a,atp6v0a1,LOC105890791 non-coding downstream 578858 19013549 ~ 19014642 (+)
LOC120575352 bax other upstream 51118 18352411 ~ 18379788 (+)
ttyh3a ttyh3 other upstream 126815 18280790 ~ 18304091 (+)
axin1 axin1,LOC104966034,LOC107564695 other upstream 639498 17750877 ~ 17791408 (+)
pla2g10 LOC104918718,LOC100698203,LOC102215607,LOC101486881,LOC102793376,LOC102313624,LOC103360505,LOC105922122 other upstream 689762 17736979 ~ 17741144 (+)
rmi2 rmi2,LOC102793083 other upstream 706677 17716739 ~ 17724229 (+)
mlx mlx,LOC102777479 other downstream 170684 18605375 ~ 18616279 (+)
G156225 LOC104944052 other downstream 288597 18723288 ~ 18724737 (+)
LOC120574764 LOC103367899,LOC104923905,LOC104944057 other downstream 356216 18790907 ~ 18809550 (+)
G156613 rpl19,LOC103371192 other downstream 1687748 20122439 ~ 20125966 (+)
arhgap23a NA other downstream 1794760 20229451 ~ 20298352 (+)

Expression


Co-expression Network