trnac-gca_23


Basic Information

Item Value
gene id trnac-gca_23
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 18325329 ~ 18325400 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_856
GGGGGTatagctcagtggtagagcatttGACTGCAGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCCCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_856 True 72 tRNA 0.57 1 18325329 18325400

Neighbor

gene id symbol gene type direction distance location
nudt1 nudt1 coding upstream 56929 18264505 ~ 18268400 (+)
elfn1a elfn1,LOC102796786,LOC102194801 coding upstream 163480 18084822 ~ 18161849 (+)
mafk mafk coding upstream 327282 17986567 ~ 17998047 (+)
uncx uncx,LOC102794453 coding upstream 473795 17848269 ~ 17851534 (+)
ubfd1 ubfd1 coding upstream 609634 17711170 ~ 17715695 (+)
trnac-gca_24 NA coding downstream 1574 18326974 ~ 18327045 (+)
trnac-gca_25 NA coding downstream 3093 18328493 ~ 18328564 (+)
pts pts coding downstream 58307 18383707 ~ 18386049 (+)
gpatch8 gpatch8,LOC102799714 coding downstream 62183 18387583 ~ 18417914 (+)
arf2a LOC101068594,LOC106537332,LOC101167961,LOC107378475,LOC103374234,LOC102228520,LOC105937532,LOC108246146 coding downstream 113162 18438562 ~ 18446843 (+)
G156053 NA non-coding upstream 145247 18179768 ~ 18180082 (+)
G156016 psmg3 non-coding upstream 303284 18019999 ~ 18022045 (+)
G155987 NA non-coding upstream 377103 17944661 ~ 17948226 (+)
G155919 NA non-coding upstream 556685 17696316 ~ 17768644 (+)
G155917 NA non-coding upstream 628042 17690624 ~ 17697287 (+)
G156113 NA non-coding downstream 930 18326330 ~ 18326696 (+)
G156114 NA non-coding downstream 7128 18332528 ~ 18332877 (+)
G156126 gosr2 non-coding downstream 94297 18419697 ~ 18420393 (+)
LOC120574045 NA non-coding downstream 96599 18421999 ~ 18423889 (+)
G156128 wnt9b non-coding downstream 105506 18430906 ~ 18434691 (+)
ttyh3a ttyh3 other upstream 21238 18280790 ~ 18304091 (+)
axin1 axin1,LOC104966034,LOC107564695 other upstream 533921 17750877 ~ 17791408 (+)
pla2g10 LOC104918718,LOC100698203,LOC102215607,LOC101486881,LOC102793376,LOC102313624,LOC103360505,LOC105922122 other upstream 584185 17736979 ~ 17741144 (+)
rmi2 rmi2,LOC102793083 other upstream 601100 17716739 ~ 17724229 (+)
hs3st4 hs3st4,LOC100711185 other upstream 821685 17414575 ~ 17503644 (+)
LOC120575352 bax other downstream 27011 18352411 ~ 18379788 (+)
mlx mlx,LOC102777479 other downstream 279975 18605375 ~ 18616279 (+)
G156225 LOC104944052 other downstream 397888 18723288 ~ 18724737 (+)
LOC120574764 LOC103367899,LOC104923905,LOC104944057 other downstream 465507 18790907 ~ 18809550 (+)
G156613 rpl19,LOC103371192 other downstream 1797039 20122439 ~ 20125966 (+)

Expression


Co-expression Network