G156016 (psmg3)


Basic Information

Item Value
gene id G156016
gene name psmg3
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 18019999 ~ 18022045 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU211455
ATCACAGCCAATGGATCTGAAATAATAGTGCAACTCACTGCTTAGCGTTTTTTGTCATGATCTGCAGTAAAACACTGCTAGCACAGAATGCTTTGCTTTGAAATGTGTTAAAAAGTTACTTTAAATTACTCTTTAACTGCATTTTCACCAAAGTAACACTGCTGTAATTGACAGAGCAGATTAGAAAAAGCATAGGAGCCGAGATGACAGGAGTTACATTTGTTTAAGAAGTGAGCGGTTTTATttcttaattatcttcatacaaaaataaattcaaacaaATTCAACCAAACAAAAAAGGTAAGGTTAATACATTAAACTGAAGCTATTGCACAGTCTTCAGTTTTTGAGAGCACAGTGGCTTGCAGAAAGCACCAGATACAATCTAAATTGTTTTTCAGAAGAAATTATTTActgtttcttttatttactGAGTGAATgcaaattttatttaaacatttgtcTCGCAGCACAAGCctcaggttgttgtttttttaaatcacagatTGGCATTTAGAAAATACTCAAAATATTTCAGTTTAAAAATACACAGGAGAAAAATGTGACATTGGGAGCATCTTTAGGCCTGTATTTTCTCAAGCCTTTAAGCTTCATGTGCATTATGTTGACCCTCTACCAGACTTGACAACTTTTTATGAtctctttcatttgttttattgaatCTATGGAGGAATCCTTGAGCGCCAGTCCCAGTAAGACAGGCCTGTTGCCGGCTTCTTTCGACACAAAAGTTGCCAGGTTTTTGGCACAAACGTGCGTCAGTGGCTGAAACTTATGTCCTGTGAACATGTCCATAACACACGGCGTACCTCATCTTTGCCCAGCAGTACTTTGGTGGAGAATGTTGGGGTGCTGATATCATTAGATCTGGAGTCAGGTGTGACAGATATCAATGTCCCCATTTTGCCATACTGAGTGAGAACTATGAATATGTAATTGCTGAACTCTGTACAGACAACCTGTGTTGAAATTCCATTgacttctttctctgtctgtctcgatCTGATGACGGGCTCAGTAGAAGACATTTTGGTAATCCTGTGGAAGAAAATGGCAGTTACAATTTCCAAG

Function

symbol description
psmg3 Predicted to be part of proteasome complex. Orthologous to human PSMG3 (proteasome assembly chaperone 3).

NR:

description
PREDICTED: proteasome assembly chaperone 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211455 True 1092 lncRNA 0.37 2 18019999 18022045

Neighbor

gene id symbol gene type direction distance location
mafk mafk coding upstream 21952 17986567 ~ 17998047 (+)
uncx uncx,LOC102794453 coding upstream 168465 17848269 ~ 17851534 (+)
ubfd1 ubfd1 coding upstream 304304 17711170 ~ 17715695 (+)
kdm8 kdm8 coding upstream 327273 17685326 ~ 17692726 (+)
LOC120574436 NA coding upstream 385735 17630426 ~ 17634264 (+)
elfn1a elfn1,LOC102796786,LOC102194801 coding downstream 62777 18084822 ~ 18161849 (+)
nudt1 nudt1 coding downstream 242460 18264505 ~ 18268400 (+)
trnac-gca_23 NA coding downstream 303284 18325329 ~ 18325400 (+)
trnac-gca_24 NA coding downstream 304929 18326974 ~ 18327045 (+)
trnac-gca_25 NA coding downstream 306448 18328493 ~ 18328564 (+)
G155987 NA non-coding upstream 71773 17944661 ~ 17948226 (+)
G155919 NA non-coding upstream 251355 17696316 ~ 17768644 (+)
G155917 NA non-coding upstream 322712 17690624 ~ 17697287 (+)
G155885 NA non-coding upstream 586273 17433518 ~ 17433726 (+)
G155882 NA non-coding upstream 637839 17381918 ~ 17382160 (+)
G156053 NA non-coding downstream 157723 18179768 ~ 18180082 (+)
G156113 NA non-coding downstream 304285 18326330 ~ 18326696 (+)
G156114 NA non-coding downstream 310483 18332528 ~ 18332877 (+)
G156126 gosr2 non-coding downstream 397652 18419697 ~ 18420393 (+)
LOC120574045 NA non-coding downstream 399954 18421999 ~ 18423889 (+)
axin1 axin1,LOC104966034,LOC107564695 other upstream 228591 17750877 ~ 17791408 (+)
pla2g10 LOC104918718,LOC100698203,LOC102215607,LOC101486881,LOC102793376,LOC102313624,LOC103360505,LOC105922122 other upstream 278855 17736979 ~ 17741144 (+)
rmi2 rmi2,LOC102793083 other upstream 295770 17716739 ~ 17724229 (+)
hs3st4 hs3st4,LOC100711185 other upstream 516355 17414575 ~ 17503644 (+)
usp31 usp31,LOC103368689,LOC101484509,LOC102212874 other upstream 727733 17272659 ~ 17292266 (+)
ttyh3a ttyh3 other downstream 258745 18280790 ~ 18304091 (+)
LOC120575352 bax other downstream 330366 18352411 ~ 18379788 (+)
mlx mlx,LOC102777479 other downstream 583330 18605375 ~ 18616279 (+)
G156225 LOC104944052 other downstream 701243 18723288 ~ 18724737 (+)
LOC120574764 LOC103367899,LOC104923905,LOC104944057 other downstream 768862 18790907 ~ 18809550 (+)

Expression


Co-expression Network