jpt2 (hn1l)


Basic Information

Item Value
gene id jpt2
gene name hn1l
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8772864 ~ 8778762 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824549.1
TTCACCACGGAGTTTTGCTGGGCATGCGCAAACAGGAGGAACTTTCTCCAGTCCAGTTGGCAAACTGACGAAGTTGTCTTCGGAAACTTGAAGGCTCAAAACCCACTATGACTTCGACAAACATGTTTCAAGGGTTGGATACTGGTACAAAACCAAGTTCAAGGGTGTTGCAGCCTCCTGGAGGTGGCTCCAGTAACCTGTTTGGTGGATATGAAGATGACTCTGCAGCATCAAGAAGACCTAATAAGATGGCCTCTAAAGTTTTTGCTCCAGCAGAGGAGTCCCAGTGTGTACCCAAACGCTCCAATCCTCCAGGTCAGACCAGCTTGTCGGGGCTTGATGTGCAGAGGCAGGCCAGTAAAAAACAGGGTGGGAAGACTAGCGGAATATTTGGGGAACCTGAACCTCCAGCTCGGCAACAGAGACCCAAACCTCCTGGTGGACCATCCAGCAACATATTCGGTGCTGCGGAGAGTGCACCTGCTCAAAGCCAGAACCGAAGCCACCCAAATAAGCCAAAGgaCAATCTAAGTGTGGGACCTGAATCATCACCATCACTTGAAGCCAAGGTCAGCCAACCTGAAGGGAAGGTGGAAGCTGCCCCCCCAGCTCCCATGCCAGCCAAAGAAGAGCCTGCTGTTGTCTCGGCCCCTCAAGAGCCTGAGCCCAAGCCCCAGtccccttctttctcttcttcaccTCCTGTTGAGAAAGAGGTGACTGGTGAGCTGAAGAACCACGAGCCTCATCTTGGACCCAAGCCTCGCTCTCACAACAGGGTTCTCAACCCCCCTGGAGGAAAGTCTAGTGTGGTATTCTACTGATCAGCTGAACGCACCTCTACTCTTGTTTGTGTCCATACGCGCCTTGTCTGCTCCCCTGTTAATCTTCTTTCATTCCAACACCCCACGGTTATTTCACCTGTACATCTAAACACAGAGCAGGATTTTTTGTTCTTCTCACCAGATTCCTATTCAAATATGTTGTCCTCAACTTCATGCACTTTGAGCCCTATTTCTGGTTTCCAGCTCTTTGTCCAATTCGTCATATTGTCCTTCAATGAAACCTGCGATCATTCAATCACCAATCAACAGGCTCGCTATTACCTAATCACTTTAACTGTGACACTATCAATCTCAGTATTGTGGTTACTAATTTCACCGTTTGTTTGTAGATGTAGTTTGGTTTAAGGCACAGTTTGTCATTTTGAAAACGTTTTTGCATCTCAAGTGTGGTTAAGACATCCGAGTGCTTGTACAATGTTCAGCTTTAAACAGTGATTGATGTGAAACGAAAATCCTTGAGTAAAAAAATCAGACATTTGCTCAAATTTCAAGGTGCTCATTTTAAATCCTTAATGTGTCGGCCTTCAATCAGAAGGGGGTGAATAGATCTTCTCACCAATGTATAATGTTTCAGGGAGTTCCACTAGTGCCACCTTTTATGTTGCTGGATCCTGATTGGATGACTACATAAAACCTGTCAATTTTACTAAATAATAGTGTTGAACTCCTCATGAATTATCCCTTCATTTCAACGTGTCCAACATTCATGATCTGCTTTCAGAACTCAAAGTCTGTTAAAGGATAGATGCCAAAAATTTACTTTGAAACAAAGATGAATGCAATTGTTGACTCCCAAATGTTTCTGCTTCCTTAAAGAAAATTCCATTTTGATTGTATGCGGATGTATTGTGCAGGTACTTCTCTGCTTTGTCGTCATTGCTTGCTTTATCTGAGAACATGCCTTTTTTGCTTGGGGTAGGCCtctgtttatgttttaaattaaaacgGCTGAAGATAAGTGAACTCTGGACCAGCGCGTGGCCTACCTGAGTCCAGGTGGGCTCATTGATAATCACCTTTTCACTCACTTCACGATGCACATTCATGGTATTCTGGTGCCAGCCTGTCCCCAGTGTGTTGATGTGCCTGGCAGGCAATGAGCACAGCAGAAGAAGATCCTGTGTATTGCAATAAAACTGTTTTGCATTTAAA
>XM_039824550.1
CACGGAGTTTTGCTGGGCATGCGCAAACAGGAGGAACTTTCTCCAGTCCAGTTGGCAAACTGACGAAGTTGTCTTCGGAAACTTGAAGGCTCAAAACCCACTATGACTTCGACAAACATGTTTCAAGGGTTGGATACTGGTACAAAACCAAGTTCAAGGGTGTTGCAGCCTCCTGGAGGTGGCTCCAGTAACCTGTTTGGTGGATATGAAGATGACTCTGCAGCATCAAGAAGACCTAATAAGATGGCCTCTAAAGTTTTTGCTCCAGCAGAGGAGTCCCAGTGTGTACCCAAACGCTCCAATCCTCCAGGTGGGAAGACTAGCGGAATATTTGGGGAACCTGAACCTCCAGCTCGGCAACAGAGACCCAAACCTCCTGGTGGACCATCCAGCAACATATTCGGTGCTGCGGAGAGTGCACCTGCTCAAAGCCAGAACCGAAGCCACCCAAATAAGCCAAAGgaCAATCTAAGTGTGGGACCTGAATCATCACCATCACTTGAAGCCAAGGTCAGCCAACCTGAAGGGAAGGTGGAAGCTGCCCCCCCAGCTCCCATGCCAGCCAAAGAAGAGCCTGCTGTTGTCTCGGCCCCTCAAGAGCCTGAGCCCAAGCCCCAGtccccttctttctcttcttcaccTCCTGTTGAGAAAGAGGTGACTGGTGAGCTGAAGAACCACGAGCCTCATCTTGGACCCAAGCCTCGCTCTCACAACAGGGTTCTCAACCCCCCTGGAGGAAAGTCTAGTGTGGTATTCTACTGATCAGCTGAACGCACCTCTACTCTTGTTTGTGTCCATACGCGCCTTGTCTGCTCCCCTGTTAATCTTCTTTCATTCCAACACCCCACGGTTATTTCACCTGTACATCTAAACACAGAGCAGGATTTTTTGTTCTTCTCACCAGATTCCTATTCAAATATGTTGTCCTCAACTTCATGCACTTTGAGCCCTATTTCTGGTTTCCAGCTCTTTGTCCAATTCGTCATATTGTCCTTCAATGAAACCTGCGATCATTCAATCACCAATCAACAGGCTCGCTATTACCTAATCACTTTAACTGTGACACTATCAATCTCAGTATTGTGGTTACTAATTTCACCGTTTGTTTGTAGATGTAGTTTGGTTTAAGGCACAGTTTGTCATTTTGAAAACGTTTTTGCATCTCAAGTGTGGTTAAGACATCCGAGTGCTTGTACAATGTTCAGCTTTAAACAGTGATTGATGTGAAACGAAAATCCTTGAGTAAAAAAATCAGACATTTGCTCAAATTTCAAGGTGCTCATTTTAAATCCTTAATGTGTCGGCCTTCAATCAGAAGGGGGTGAATAGATCTTCTCACCAATGTATAATGTTTCAGGGAGTTCCACTAGTGCCACCTTTTATGTTGCTGGATCCTGATTGGATGACTACATAAAACCTGTCAATTTTACTAAATAATAGTGTTGAACTCCTCATGAATTATCCCTTCATTTCAACGTGTCCAACATTCATGATCTGCTTTCAGAACTCAAAGTCTGTTAAAGGATAGATGCCAAAAATTTACTTTGAAACAAAGATGAATGCAATTGTTGACTCCCAAATGTTTCTGCTTCCTTAAAGAAAATTCCATTTTGATTGTATGCGGATGTATTGTGCAGGTACTTCTCTGCTTTGTCGTCATTGCTTGCTTTATCTGAGAACATGCCTTTTTTGCTTGGGGTAGGCCtctgtttatgttttaaattaaaacgGCTGAAGATAAGTGAACTCTGGACCAGCGCGTGGCCTACCTGAGTCCAGGTGGGCTCATTGATAATCACCTTTTCACTCACTTCACGATGCACATTCATGGTATTCTGGTGCCAGCCTGTCCCCAGTGTGTTGATGTGCCTGGCAGGCAATGAGCACAGCAGAAGAAGATCCTGTGTATTGCAATAAAACTGTTTTGCATTTAAA

Function

NR:

description
hematological and neurological expressed 1-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824549.1 True 1997 mRNA 0.45 5 8772864 8778762
XM_039824550.1 False 1938 mRNA 0.45 5 8772864 8778757

Neighbor

gene id symbol gene type direction distance location
mapk8ip3 mapk8ip3 coding downstream 4164 8739631 ~ 8768700 (-)
nudt9 nudt9 coding downstream 107210 8660302 ~ 8665654 (-)
si:ch211-11k18.4 LOC101474882,LOC102302894 coding downstream 113645 8651632 ~ 8659219 (-)
rabep2 rabep2 coding downstream 132429 8627083 ~ 8640435 (-)
LOC120573875 LOC104929518,LOC103375462,LOC108242957 coding downstream 252277 8513629 ~ 8520587 (-)
dhrs7b dhrs7b coding upstream 20713 8799475 ~ 8805852 (-)
tmem11 tmem11 coding upstream 28472 8807234 ~ 8810350 (-)
tmem86b LOC103374980 coding upstream 82400 8861162 ~ 8862826 (-)
gys1 gys1 coding upstream 87824 8866586 ~ 8881153 (-)
LOC120573900 NA coding upstream 131185 8909947 ~ 8914504 (-)
G153139 NA non-coding downstream 88111 8659611 ~ 8684753 (-)
G153143 NA non-coding downstream 125573 8647083 ~ 8647291 (-)
G153142 NA non-coding downstream 127839 8644784 ~ 8645025 (-)
G153130 atp2a1 non-coding downstream 156752 8612277 ~ 8616112 (-)
G153127 atp2a1,LOC102238060,LOC106906942,LOC103469116 non-coding downstream 160867 8551296 ~ 8611997 (-)
G153274 NA non-coding upstream 282534 9061296 ~ 9111224 (-)
G153275 NA non-coding upstream 286234 9064996 ~ 9085687 (-)
G153455 NA non-coding upstream 417996 9196758 ~ 9203859 (-)
G153456 NA non-coding upstream 420896 9199658 ~ 9501467 (-)
G153462 NA non-coding upstream 440837 9219599 ~ 9219903 (-)
G153172 mrps34,LOC102799846 other downstream 39845 8731397 ~ 8733019 (-)
G152952 NA other downstream 328483 8441179 ~ 8444381 (-)
LOC120574885 LOC103375378,LOC104925605,LOC104966930 other downstream 672466 8082138 ~ 8100398 (-)
grin2aa grin2a,LOC102780805 other downstream 1048950 7569718 ~ 7723914 (-)
arhgdig NA other downstream 1971328 6772880 ~ 6801536 (-)
natd1 natd1 other upstream 33568 8812330 ~ 8816305 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other upstream 71681 8850443 ~ 8857571 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other upstream 117020 8895782 ~ 8907662 (-)
LOC120574599 NA other upstream 408488 9187250 ~ 9204006 (-)
LOC120574343 NA other upstream 410622 9189384 ~ 9190066 (-)

Expression


Co-expression Network