slc17a7a (LOC104930346,LOC103374936,LOC102793338,LOC101484681,LOC100693903)


Basic Information

Item Value
gene id slc17a7a
gene name LOC104930346,LOC103374936,LOC102793338,LOC101484681,LOC100693903
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8924601 ~ 8942317 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824720.1
agagaggactgtGCGTGTTCAGGCAGGACAGGAGGGCGCGCGGGACATCAGTACACCGGCCGGGTCAAGAAGCTGCAAGGATGGATATCCGACCAGACAGGTTTAAGGCGGTCGCGGCCAAAACTCTGGGGAAAATTAACAGGCTGATTGAGAAGCGACAGCCCAATGGAGAAACCATTGAATTATCAGCTGAGGGACGTCCTGAGCTGGTGGAGGAGAAGGAGCTGCCGGTGGTGGACTGTACCTGCTTTGGCTTGCCGAGGAGGTACATCATCGCCATCCTGTCTGGCCTGGGATTCTGCATCTCTTTTGGCATCCGGTGCAACCTGGGTGTGGCCATTGTAAGCATGGTGAATGACCACACTGTCTACAAAGGCAACAAGGAAGTACTTGTGGCTGCACAGTTCACCTGGGACCCTGAGACAGTGGGGATGATCCACGGCTCCTTCTTCTGGGGCTATATCGTCACACAGATACCGGGTGGCTTTATATGTCGAAAATTTGCAGCCAACAGAGTGTTTGGATTTGCTATAGTGGCCACATCCACCCTCAACATGCTGATTCCATCTGCTGCTCGCTGCCATTACAGCTGCGTCATACTGGTCAGAATATGCCAGGGTCTTGTTgagGGTGTATCATACCCAGCCTGCCACGGGATCTGGGCCAAGTGGGCGCCTCCTCTTGAGAGAAGTCGATTAGCCACTACAGCCTTTTGTGGATCCTATGCAGGGGCGGTGGTGGCCATGCCTTTAGCAGGGATACTGGTGCAATACACTGGGTGGTCTTCAGTATTCTATGTCTATGGCAGCTTTGGGATATGCTGGTATTTGTTCTGGATTCTGGTGTCGTATGAGAGTCCCGCTGCTCATCCCACTATTACACCGGAGGAGAGGAAGTACATTGAAGAGGCAATCGGAGAGTCTGCATCATTTCTTAATCCTCTGCATAAATTTAAAACACCATGGAAACACTTCTTCACCTCCATGCCAGTCTACGCCATCATTGTGGCCAACTTCTGCAGGAGCTGGACCTTCTACCTGCTGCTCATCAGCCAGCCGGCCTACTTTGAAGAAGTATTTGGCTTTGAGATCAGCAAGGTGGGCATGGTGTCAGCTTTGCCCCATCTGGTGATGACAATAATCGTGCCTATTGGAGGCCAGTTGGCAGACTACCTGAGAACCCACAATTTAATGACCACCACCAATGTCAGGAAGCTCATGAACTGTGGAGGTTTTGGGATGGAGGCCACCCTCCTGCTGGTGGTGGGATACTCTCACACAAAAGGTATTGCCATTTCCTTCCTGGTCCTCGCTGTGGGTTTCAGTGGATTTGCTATCTCAGGGTTTAATGTCAATCACTTGGATATCGCCCCTCGATATGCCAGCATACTGATGGGCATCTCAAACGGGGTGGGAACATTATCTGGAATGGTGTGTCCTCTCATAGTGGGAGCCATGACCAAACACAAGACACGTGAAGAGTGGCAGGGTGTCTTCCTAATAGCTTCACTCGTACATTACGGAGGAGTGATTTTCTATGGTATCTTTGCATCAGGGGAAAAGCAGCCTTGGGCGGATATAGAGGACACCAGTGAGGAGAAGTGCGGTATTATCGATGAGGAtgaactggccaatgaaacagaTGAGCTCTACCGCGGAGGCGGGCAGTACGGGGCCATGAACCAACCAGTTGTTGGTTCTAATGGAGGAGGGACTGGCGGAGGAGGAGCCGGGTCTGGATGGGTGTCGGACTGGGATAAGTCTGAGGAGTATGTCCAGCCACCTGGATACAACTCGTACATGTATAGGGGAAAAGAGGAGAAGGAGCTGACATAGAAGATCAAAATGATACGATGATGCGATgatgaagtaaaaaaataataataattgaaaaaaagataaagaaaagaggaagattGTTTTTGGAAAGGGATTGTAAGAGAGTCACTGTTTTACTGAATGGACCTGCTGTGTGCTTTTGTACAATATTTTCAACTGCACATATCAAAAGTATGCATCTGATTaatttccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgcgtgtgcgcaCGCGTGTGTGCATTGTGTGCAAACACATACAATTCAACAGCATTCAACAGCAAAAACTGAACTCAGATCCCAGACTTCCTTCCTGCTCCTGAGCTCGTTGTGATTGGTCAAGCGTCCTGTTTTCCACGACATCACTGTGGAGattctgtgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtagtTGGCTTTTTGCCTGTACAGCAACTCTCTCAAGCCACTGGCATTgtgttgtatttaaatttttatgTGTAAACCACACATTTACTTTTCTTGCTGAGAAAGCACCTTTGGGTCCTCAGTTTTGAAACGTTAAACATTTGAGCTTACAACATTGTCCAaattacaaaatacaaaatgtgaTGCCACTAGTGTAGATTGCTTACACTTTCTAGTCTATATTACTCCCAAGGCCCTCAGCCTCAATAGAAATCATATTGAGCATATGAGTTTTAAAAATCAATACACAAACTAAAAGCTAATGTGTTTTTATGAGTGAGGCCCCTTGTGGACAATCTTTTCTGGACGCTAGTGATGCATCCACttaatttctttctttgcaAAATAATATTTCCACAGCACTGCATAACTAtagtatgcatgcatgtgccgACTACTTTCAAACTATTAAATCAAAGAGAAAAAATGTGCTTAAGTGTTGTatcagtctgtgtttgtgtgtgtgaagctgtATAGCTTTTGTTACAACAGGCCCCctttatgtgtgtgcatttgattgTGCAAAGGTGTGTGTTTGAGCTTGCATTTGGTGTCTAGCTGAATCTCACCTGTGTCTGACCTAACTAGGTCACGTCCAGCCAGGCTTATGGGTCACATGAGTAATCATCTGACATTTGTGACTTTTCATTTGCCGTTTACGCTCTCGTCAGATAGGTGGCCCAGAATGACAAGTAGAGTGTGATAGCTGGTTAACTGATCCACTGCGTAACTAGCGAGGAACAACAGTTATAATATTCCCAGGCATCACAGCACGTGCTGCCTCTGTTTCTGCCTTGTTCTGTGTCTTTGTGGCTGCTCTCTGTTTCCACGTCTTTAGTATCTAAATTTTAGTCATGTTTGAGTTGGTGGGTCAGAtaatttaagtgtgtgtgtgtgtgtgtgcgtgtgcggcGTGCGTGcaggcgtgcgtgcgtgcgtgagtgcGTGCGTATGTGAGTGCGTGCGAGCGAGCGTTCGTTGTGTTGGGTGCAGGTGCTGAAACATTGTGCGGTGAGCATGTTTTAATGAGCACATCAGTGTAGTACCCCAccatccctctcttccttttgcacacacacacacacacacacacacacacacacacacacacacatatatacacacacatacacacacacacacatatacacacacatacacacacacagggtgctAATTTCATGCAAGCACAGTCAAGTGCACTATGCACAGTGTGCAGAGGGAGTGGTGGCACACTTTTTGGTATTTACATTGCTGTGAAGCACCCATGGAAACAGGGTGGGATTAGGAAGTATTATCATACATTGTCAGAGGGTGTGTTAAGGTTTGGTAACAATCATGGCCAATCAACTCAGCTCCTATCAAGCCCTTCAAAAGCAGCACCCTCTCCATTGTGACGCAATGACAGCTGGGTAATGGAGTAGGGAGTTCAGAGGTGCTTCTCTTGAGAGGACACCAACATGCTTATACAGGAGAGGAACTGTCATATTAAACAAACTGCACAGTACAACTCTGTGCGCCTGCACATACagccaacatacagtacattaaacatgttcatgcacacacaaacactacgTCTGCCCTCTGTGTGTACTCACAGGCCATGCCAACACACAATGTTTTTTGCAGACGGCTCTTTTTCAGATCAAGAATCTAATTCTGTTTAACTTGTAGAGAGTTTGTGAATTGAGCTCACTtttgtgagagaaaaaaaaatacactactggattgttaaaataattgtatttgatTAAACTGAGGGTTTAATGGTAAAATGTGTTGGTATGTCAATAAATGATTTGAAAAAGTGATTAAGGCTAATTTTGTTTTGAATGAAATGTCTAAAAGACGTGAATGATTATTCCTGTATAGAATTTCATTTTCAAGTGTTGTATTGGTGTATTTTTAATCAAGTTTCTCTTTGTCTCATTTATGGTTAGTCCAATGTTGTCCTCCTCCTTCTTGATGAAATGTGTGGTGGGAatcagttaaaaaagaaaatgatcataatgcaaaaatgtgcaaaatatTCTATGTATAAAAGATGTATATGTGAGATCTCCTTGTGTATAATAAAATGTAAGCAATTTGAGAAGA

Function

NR:

description
PREDICTED: vesicular glutamate transporter 1

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K12302 SLC17A6_7_8; MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6/7/8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824720.1 True 4409 mRNA 0.45 13 8924601 8942317

Neighbor

gene id symbol gene type direction distance location
LOC120573900 NA coding downstream 10097 8909947 ~ 8914504 (-)
gys1 gys1 coding downstream 43448 8866586 ~ 8881153 (-)
tmem86b LOC103374980 coding downstream 61775 8861162 ~ 8862826 (-)
tmem11 tmem11 coding downstream 114251 8807234 ~ 8810350 (-)
dhrs7b dhrs7b coding downstream 118749 8799475 ~ 8805852 (-)
slc6a16a LOC103374926,LOC104930347,LOC104945282 coding upstream 742 8943059 ~ 8955286 (-)
nme4 LOC104945280,LOC106931198,LOC106951632,LOC108242919,LOC100703020 coding upstream 27565 8969882 ~ 8973648 (-)
xpo6 xpo6,LOC102794690 coding upstream 31506 8973823 ~ 8998370 (-)
antkmt LOC103374876 coding upstream 56563 8998880 ~ 9003151 (-)
hirip3 NA coding upstream 60948 9003265 ~ 9010931 (-)
G153137 NA non-coding downstream 148335 8700109 ~ 8776266 (-)
G153139 NA non-coding downstream 239848 8659611 ~ 8684753 (-)
G153143 NA non-coding downstream 277310 8647083 ~ 8647291 (-)
G153142 NA non-coding downstream 279576 8644784 ~ 8645025 (-)
G153130 atp2a1 non-coding downstream 308489 8612277 ~ 8616112 (-)
G153274 NA non-coding upstream 118979 9061296 ~ 9111224 (-)
G153275 NA non-coding upstream 122679 9064996 ~ 9085687 (-)
G153455 NA non-coding upstream 254441 9196758 ~ 9203859 (-)
G153456 NA non-coding upstream 257341 9199658 ~ 9501467 (-)
G153462 NA non-coding upstream 277282 9219599 ~ 9219903 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other downstream 16939 8895782 ~ 8907662 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other downstream 67030 8850443 ~ 8857571 (-)
natd1 natd1 other downstream 108296 8812330 ~ 8816305 (-)
G153172 mrps34,LOC102799846 other downstream 191582 8731397 ~ 8733019 (-)
G152952 NA other downstream 480220 8441179 ~ 8444381 (-)
LOC120574599 NA other upstream 244933 9187250 ~ 9204006 (-)
LOC120574343 NA other upstream 247067 9189384 ~ 9190066 (-)
LOC120574654 NA other upstream 249669 9191986 ~ 9192402 (-)
LOC120574662 NA other upstream 274752 9217069 ~ 9224455 (-)
LOC120574348 NA other upstream 278224 9220541 ~ 9221090 (-)

Expression


Co-expression Network