RNA id: XM_039824720.1


Basic Information

Item Value
RNA id XM_039824720.1
length 4409
RNA type mRNA
GC content 0.45
exon number 13
gene id slc17a7a
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8924601 ~ 8942317 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

agagaggactgtGCGTGTTCAGGCAGGACAGGAGGGCGCGCGGGACATCAGTACACCGGCCGGGTCAAGAAGCTGCAAGGATGGATATCCGACCAGACAGGTTTAAGGCGGTCGCGGCCAAAACTCTGGGGAAAATTAACAGGCTGATTGAGAAGCGACAGCCCAATGGAGAAACCATTGAATTATCAGCTGAGGGACGTCCTGAGCTGGTGGAGGAGAAGGAGCTGCCGGTGGTGGACTGTACCTGCTTTGGCTTGCCGAGGAGGTACATCATCGCCATCCTGTCTGGCCTGGGATTCTGCATCTCTTTTGGCATCCGGTGCAACCTGGGTGTGGCCATTGTAAGCATGGTGAATGACCACACTGTCTACAAAGGCAACAAGGAAGTACTTGTGGCTGCACAGTTCACCTGGGACCCTGAGACAGTGGGGATGATCCACGGCTCCTTCTTCTGGGGCTATATCGTCACACAGATACCGGGTGGCTTTATATGTCGAAAATTTGCAGCCAACAGAGTGTTTGGATTTGCTATAGTGGCCACATCCACCCTCAACATGCTGATTCCATCTGCTGCTCGCTGCCATTACAGCTGCGTCATACTGGTCAGAATATGCCAGGGTCTTGTTgagGGTGTATCATACCCAGCCTGCCACGGGATCTGGGCCAAGTGGGCGCCTCCTCTTGAGAGAAGTCGATTAGCCACTACAGCCTTTTGTGGATCCTATGCAGGGGCGGTGGTGGCCATGCCTTTAGCAGGGATACTGGTGCAATACACTGGGTGGTCTTCAGTATTCTATGTCTATGGCAGCTTTGGGATATGCTGGTATTTGTTCTGGATTCTGGTGTCGTATGAGAGTCCCGCTGCTCATCCCACTATTACACCGGAGGAGAGGAAGTACATTGAAGAGGCAATCGGAGAGTCTGCATCATTTCTTAATCCTCTGCATAAATTTAAAACACCATGGAAACACTTCTTCACCTCCATGCCAGTCTACGCCATCATTGTGGCCAACTTCTGCAGGAGCTGGACCTTCTACCTGCTGCTCATCAGCCAGCCGGCCTACTTTGAAGAAGTATTTGGCTTTGAGATCAGCAAGGTGGGCATGGTGTCAGCTTTGCCCCATCTGGTGATGACAATAATCGTGCCTATTGGAGGCCAGTTGGCAGACTACCTGAGAACCCACAATTTAATGACCACCACCAATGTCAGGAAGCTCATGAACTGTGGAGGTTTTGGGATGGAGGCCACCCTCCTGCTGGTGGTGGGATACTCTCACACAAAAGGTATTGCCATTTCCTTCCTGGTCCTCGCTGTGGGTTTCAGTGGATTTGCTATCTCAGGGTTTAATGTCAATCACTTGGATATCGCCCCTCGATATGCCAGCATACTGATGGGCATCTCAAACGGGGTGGGAACATTATCTGGAATGGTGTGTCCTCTCATAGTGGGAGCCATGACCAAACACAAGACACGTGAAGAGTGGCAGGGTGTCTTCCTAATAGCTTCACTCGTACATTACGGAGGAGTGATTTTCTATGGTATCTTTGCATCAGGGGAAAAGCAGCCTTGGGCGGATATAGAGGACACCAGTGAGGAGAAGTGCGGTATTATCGATGAGGAtgaactggccaatgaaacagaTGAGCTCTACCGCGGAGGCGGGCAGTACGGGGCCATGAACCAACCAGTTGTTGGTTCTAATGGAGGAGGGACTGGCGGAGGAGGAGCCGGGTCTGGATGGGTGTCGGACTGGGATAAGTCTGAGGAGTATGTCCAGCCACCTGGATACAACTCGTACATGTATAGGGGAAAAGAGGAGAAGGAGCTGACATAGAAGATCAAAATGATACGATGATGCGATgatgaagtaaaaaaataataataattgaaaaaaagataaagaaaagaggaagattGTTTTTGGAAAGGGATTGTAAGAGAGTCACTGTTTTACTGAATGGACCTGCTGTGTGCTTTTGTACAATATTTTCAACTGCACATATCAAAAGTATGCATCTGATTaatttccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgcgtgtgcgcaCGCGTGTGTGCATTGTGTGCAAACACATACAATTCAACAGCATTCAACAGCAAAAACTGAACTCAGATCCCAGACTTCCTTCCTGCTCCTGAGCTCGTTGTGATTGGTCAAGCGTCCTGTTTTCCACGACATCACTGTGGAGattctgtgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtagtTGGCTTTTTGCCTGTACAGCAACTCTCTCAAGCCACTGGCATTgtgttgtatttaaatttttatgTGTAAACCACACATTTACTTTTCTTGCTGAGAAAGCACCTTTGGGTCCTCAGTTTTGAAACGTTAAACATTTGAGCTTACAACATTGTCCAaattacaaaatacaaaatgtgaTGCCACTAGTGTAGATTGCTTACACTTTCTAGTCTATATTACTCCCAAGGCCCTCAGCCTCAATAGAAATCATATTGAGCATATGAGTTTTAAAAATCAATACACAAACTAAAAGCTAATGTGTTTTTATGAGTGAGGCCCCTTGTGGACAATCTTTTCTGGACGCTAGTGATGCATCCACttaatttctttctttgcaAAATAATATTTCCACAGCACTGCATAACTAtagtatgcatgcatgtgccgACTACTTTCAAACTATTAAATCAAAGAGAAAAAATGTGCTTAAGTGTTGTatcagtctgtgtttgtgtgtgtgaagctgtATAGCTTTTGTTACAACAGGCCCCctttatgtgtgtgcatttgattgTGCAAAGGTGTGTGTTTGAGCTTGCATTTGGTGTCTAGCTGAATCTCACCTGTGTCTGACCTAACTAGGTCACGTCCAGCCAGGCTTATGGGTCACATGAGTAATCATCTGACATTTGTGACTTTTCATTTGCCGTTTACGCTCTCGTCAGATAGGTGGCCCAGAATGACAAGTAGAGTGTGATAGCTGGTTAACTGATCCACTGCGTAACTAGCGAGGAACAACAGTTATAATATTCCCAGGCATCACAGCACGTGCTGCCTCTGTTTCTGCCTTGTTCTGTGTCTTTGTGGCTGCTCTCTGTTTCCACGTCTTTAGTATCTAAATTTTAGTCATGTTTGAGTTGGTGGGTCAGAtaatttaagtgtgtgtgtgtgtgtgtgcgtgtgcggcGTGCGTGcaggcgtgcgtgcgtgcgtgagtgcGTGCGTATGTGAGTGCGTGCGAGCGAGCGTTCGTTGTGTTGGGTGCAGGTGCTGAAACATTGTGCGGTGAGCATGTTTTAATGAGCACATCAGTGTAGTACCCCAccatccctctcttccttttgcacacacacacacacacacacacacacacacacacacacacacatatatacacacacatacacacacacacacatatacacacacatacacacacacagggtgctAATTTCATGCAAGCACAGTCAAGTGCACTATGCACAGTGTGCAGAGGGAGTGGTGGCACACTTTTTGGTATTTACATTGCTGTGAAGCACCCATGGAAACAGGGTGGGATTAGGAAGTATTATCATACATTGTCAGAGGGTGTGTTAAGGTTTGGTAACAATCATGGCCAATCAACTCAGCTCCTATCAAGCCCTTCAAAAGCAGCACCCTCTCCATTGTGACGCAATGACAGCTGGGTAATGGAGTAGGGAGTTCAGAGGTGCTTCTCTTGAGAGGACACCAACATGCTTATACAGGAGAGGAACTGTCATATTAAACAAACTGCACAGTACAACTCTGTGCGCCTGCACATACagccaacatacagtacattaaacatgttcatgcacacacaaacactacgTCTGCCCTCTGTGTGTACTCACAGGCCATGCCAACACACAATGTTTTTTGCAGACGGCTCTTTTTCAGATCAAGAATCTAATTCTGTTTAACTTGTAGAGAGTTTGTGAATTGAGCTCACTtttgtgagagaaaaaaaaatacactactggattgttaaaataattgtatttgatTAAACTGAGGGTTTAATGGTAAAATGTGTTGGTATGTCAATAAATGATTTGAAAAAGTGATTAAGGCTAATTTTGTTTTGAATGAAATGTCTAAAAGACGTGAATGATTATTCCTGTATAGAATTTCATTTTCAAGTGTTGTATTGGTGTATTTTTAATCAAGTTTCTCTTTGTCTCATTTATGGTTAGTCCAATGTTGTCCTCCTCCTTCTTGATGAAATGTGTGGTGGGAatcagttaaaaaagaaaatgatcataatgcaaaaatgtgcaaaatatTCTATGTATAAAAGATGTATATGTGAGATCTCCTTGTGTATAATAAAATGTAAGCAATTTGAGAAGA

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K12302 SLC17A6_7_8; MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6/7/8

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207565 lncRNA downstream 20778 8895786 ~ 8903823 (-) False zgc:55558
TU207566 lncRNA downstream 20778 8895786 ~ 8903823 (-) False zgc:55558
TU207568 lncRNA downstream 20778 8895786 ~ 8903823 (-) False zgc:55558
TU207562 lncRNA downstream 25972 8895786 ~ 8898629 (-) False zgc:55558
TU207439 lncRNA downstream 204701 8718193 ~ 8719900 (-) False G153137
TU207647 lncRNA upstream 118979 9061296 ~ 9111224 (-) True G153274
TU207650 lncRNA upstream 118979 9061296 ~ 9101630 (-) False G153274
TU207653 lncRNA upstream 122679 9064996 ~ 9085687 (-) True G153275
TU207884 lncRNA upstream 244933 9187250 ~ 9194175 (-) False LOC120574599
TU207886 lncRNA upstream 244933 9187250 ~ 9204006 (-) False LOC120574599
XM_039823806.1 mRNA downstream 10097 8909947 ~ 8914504 (-) False LOC120573900
XM_039823807.1 mRNA downstream 10097 8909947 ~ 8914504 (-) True LOC120573900
XM_039823980.1 mRNA downstream 23370 8895782 ~ 8901231 (-) True zgc:55558
XM_039823975.1 mRNA downstream 43448 8866586 ~ 8881153 (-) False gys1
XM_039823977.1 mRNA downstream 43529 8866586 ~ 8881072 (-) True gys1
XM_039824719.1 mRNA upstream 742 8943059 ~ 8955286 (-) True slc6a16a
XM_039824495.1 mRNA upstream 27565 8969882 ~ 8973648 (-) True nme4
XM_039824496.1 mRNA upstream 28763 8971080 ~ 8973255 (-) False nme4
XM_039824494.1 mRNA upstream 31506 8973823 ~ 8998370 (-) True xpo6
XM_039825593.1 mRNA upstream 56563 8998880 ~ 9003151 (-) True antkmt
TU207564 other downstream 16939 8904081 ~ 8907662 (-) False zgc:55558
TU207570 other downstream 20261 8895786 ~ 8904340 (-) False zgc:55558
TU207546 other downstream 67030 8853760 ~ 8857571 (-) False tufm
TU207545 other downstream 67644 8853760 ~ 8856957 (-) True tufm
unassigned_transcript_737 other upstream 247067 9189384 ~ 9190066 (-) True LOC120574343
unassigned_transcript_738 other upstream 249669 9191986 ~ 9192402 (-) True LOC120574654
unassigned_transcript_739 other upstream 251301 9193618 ~ 9194157 (-) True LOC120574599
unassigned_transcript_740 other upstream 278224 9220541 ~ 9221072 (-) True LOC120574348
TU207903 other upstream 278300 9220617 ~ 9221090 (-) False LOC120574348

Expression Profile