RNA id: TU207546


Basic Information

Item Value
RNA id TU207546
length 1336
RNA type TUCP
GC content 0.49
exon number 7
gene id tufm
representative False

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8850443 ~ 8857571 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CATTTGGCCAAAATCCAAAGATGTTTACTTCAAAAgcatagaaaagaaaaacaatacataTTAAAATTGTAGTTGTTCAAACCAGTAAATATGGGCCTTATCGCTTAAAAAAAATGGAGTTAAAACAATCAATAACCAAAAAAGACCGTCAGTGAGAACTAACTGACGCGTGGACTAGAAAGTCTGGAACAAGAGATGTGTGCGTGTAGGGCTTTCTGCCCAAAGCCTCCTTATGTTTGCAATGTATTATTAACAGGCCCTCACCTCCTCTGACATGGGTTCAACAGTGGCAGGTCCCTCTGCGGCTGAACCAACATCCACTGCTAGCTGCAGGACCCCCTGGAGGTTCTGGGGATATCTCCTAGTTGGTCTGTCTTCTGCCATGATGTGCGCCGCTGAGGAGCAAAACAAGGAACATCAACAAGACAATTGGACCACCGGATTCAGAAATGACGTGCAGTAGACAGGGCCTGTGAAAATTaatcaaaaatacagttttaaacTTTACTCTCTGATGACCCTGGCATTACCCTTGCACTACTTCTAAGGACCCCATTCGCAGCTAttcgacaCTGCGTGGGCGACAGCTTTGGAGCTGGTGAGGTACTCTCTTGATTTTATGATCGTCTTGGTTTTGCCTCACcatccaagatggcggcgctTGTGGGATTGCGTGCATGTTTCTCCGCCCTTCAGCTGTCTTCGCCATGCCTCCTGCACAGCTCCTTTAAATTGTGTGCTGTGCCCCTGAGTCGGCGGACCTTTGCTGCAGAGGCTAAGAAGACCTACAGCAGGGACAAGCCCCATGTGAACATTGGAACAATTGGTCATGTTGATCACGGAAAGACAACCCTGACTGCAGCCATCACAAAAGTGCTCGCTGACGCTGGTGGTGCTAACTATAAAAAATATGAAGACATTGACAATGCCCCTGAAGAGAAGGCCAGAGGAATCACCATCAATGCCTCTCATGTAGAATACACCACAGCCAACAGACATTATGCTCACACAGACTGTCCTGGTCATGCTGACTATGTCAAGaacatgATTACAGGCACAGCTCAGATGGACGGCTGCATCCTGGTGGTGGCGGCCACTGACGGCCAGATGCCTCAGACACGAGAGCACCTCCTGTTGGCCAGGCAGATTGGCGTCGAGCATGTtgtggttttcatcaacaaggCCGATGCCGTGGAGGACAGGGAGATGGTGGAACTGGTGGAGATCGAGATCCGCGAGCTGCTCACAGAGTTCGGCTATGATGGCGAGAACACACCTGTTGTGATAGGCTCAGCCCTCTGCGCCCTGGAGAACAGAGAGCCTGAATCGTGTAAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207436 lncRNA downstream 77494 8718193 ~ 8776266 (-) False G153137
TU207437 lncRNA downstream 133860 8700109 ~ 8719900 (-) False G153137
TU207438 lncRNA downstream 133860 8700109 ~ 8719900 (-) True G153137
TU207435 lncRNA downstream 133860 8718193 ~ 8719900 (-) False G153137
TU207439 lncRNA downstream 133860 8718193 ~ 8719900 (-) False G153137
TU207562 lncRNA upstream 38215 8895786 ~ 8898629 (-) False zgc:55558
TU207565 lncRNA upstream 38215 8895786 ~ 8903823 (-) False zgc:55558
TU207566 lncRNA upstream 38215 8895786 ~ 8903823 (-) False zgc:55558
TU207568 lncRNA upstream 38215 8895786 ~ 8903823 (-) False zgc:55558
TU207647 lncRNA upstream 203725 9061296 ~ 9111224 (-) True G153274
XM_039824555.1 mRNA downstream 37455 8812330 ~ 8816305 (-) True natd1
XM_039824554.1 mRNA downstream 43410 8807234 ~ 8810350 (-) False tmem11
XM_039824553.1 mRNA downstream 43413 8807234 ~ 8810347 (-) True tmem11
XM_039824551.1 mRNA downstream 47908 8799475 ~ 8805852 (-) True dhrs7b
XM_039824550.1 mRNA downstream 75003 8772864 ~ 8778757 (-) False jpt2
XM_039825141.1 mRNA upstream 3591 8861162 ~ 8862826 (-) True tmem86b
XM_039823975.1 mRNA upstream 9015 8866586 ~ 8881153 (-) False gys1
XM_039823977.1 mRNA upstream 9015 8866586 ~ 8881072 (-) True gys1
XM_039823980.1 mRNA upstream 38211 8895782 ~ 8901231 (-) True zgc:55558
XM_039823806.1 mRNA upstream 52376 8909947 ~ 8914504 (-) False LOC120573900
TU207525 other downstream 37484 8812342 ~ 8816276 (-) False natd1
TU207482 other downstream 120741 8731397 ~ 8733019 (-) True G153172
TU207167 other downstream 409379 8441179 ~ 8444381 (-) True G152952
XR_005641918.1 other downstream 753362 8082138 ~ 8100398 (-) False LOC120574885
TU206683 other downstream 2133117 6719784 ~ 6720643 (-) True G152567
TU207570 other upstream 38215 8895786 ~ 8904340 (-) False zgc:55558
TU207564 other upstream 46510 8904081 ~ 8907662 (-) False zgc:55558
unassigned_transcript_737 other upstream 331813 9189384 ~ 9190066 (-) True LOC120574343
unassigned_transcript_738 other upstream 334415 9191986 ~ 9192402 (-) True LOC120574654
unassigned_transcript_739 other upstream 336047 9193618 ~ 9194157 (-) True LOC120574599

Expression Profile