RNA id: TU207564



Basic Information


Item Value
RNA id TU207564
length 649
RNA type TUCP
GC content 0.45
exon number 4
gene id zgc:55558
representative False

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8895782 ~ 8907662 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTTTCAATGAGCCACGATAGACTAGGAACTCGCACGGATTCAGgcttttaatttattcattatATGAAGTTCGATTTTTACTAGTAGCTTCACAAACTGTGGTTTATATTTTGACACGTAATTCTAGTGAGGAAAACAAGTTGCGAATAGATCGTGAAGTTTTGTCTGCAAGTGTTTTGAATAAGGAAATCGTTTTAGGCTAACGTAATGTAGCAAGCTAATCTCATTTATCCATTCGTAAACTCCGCTATCATTTCACAGAGTGTTATAACAACTACATAAAGGCATGACCGAGTACAAACTTGTGGTGGTCGGGGCAGGAGGTGTGGGGAAGAGCGCTCTCACCATCCAGCTCATCCAGAACCACTTCGTAGATGAATATGATCCAACCATCGAGGACTCGTACAGAAAACAGGTGGTGATTGATGGAGAGACTTGTCTGTTGGACATCCTGGACACTGCAGGTCAGGAGGAGTACAGCGCCATGAGGGACCAGTATATGAGGACAGGAGAgggcttcctgtgtgtgtttgcgatCAACAACATCAAGTCCTTTGAGGACGTTCACCTCTACAGAGAGCAGATCAACAGGGTGAAGGACAGTGACAGTGTTCCCATGGTGCTGGTGGGGAATAAGAGCGACCTGGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207565 lncRNA downstream 258 8895786 ~ 8903823 (-) False zgc:55558
TU207566 lncRNA downstream 258 8895786 ~ 8903823 (-) False zgc:55558
TU207568 lncRNA downstream 258 8895786 ~ 8903823 (-) False zgc:55558
TU207562 lncRNA downstream 5452 8895786 ~ 8898629 (-) False zgc:55558
TU207436 lncRNA downstream 127815 8718193 ~ 8776266 (-) False G153137
TU207647 lncRNA upstream 153634 9061296 ~ 9111224 (-) True G153274
TU207650 lncRNA upstream 153634 9061296 ~ 9101630 (-) False G153274
TU207653 lncRNA upstream 157334 9064996 ~ 9085687 (-) True G153275
TU207884 lncRNA upstream 279588 9187250 ~ 9194175 (-) False LOC120574599
TU207886 lncRNA upstream 279588 9187250 ~ 9204006 (-) False LOC120574599
XM_039823980.1 mRNA downstream 2850 8895782 ~ 8901231 (-) True zgc:55558
XM_039823975.1 mRNA downstream 22928 8866586 ~ 8881153 (-) False gys1
XM_039823977.1 mRNA downstream 23009 8866586 ~ 8881072 (-) True gys1
XM_039825141.1 mRNA downstream 41255 8861162 ~ 8862826 (-) True tmem86b
XM_039824633.1 mRNA downstream 48052 8850443 ~ 8856029 (-) False tufm
XM_039823806.1 mRNA upstream 2285 8909947 ~ 8914504 (-) False LOC120573900
XM_039823807.1 mRNA upstream 2285 8909947 ~ 8914504 (-) True LOC120573900
XM_039824720.1 mRNA upstream 16939 8924601 ~ 8942317 (-) True slc17a7a
XM_039824719.1 mRNA upstream 35397 8943059 ~ 8955286 (-) True slc6a16a
XM_039824495.1 mRNA upstream 62220 8969882 ~ 8973648 (-) True nme4
TU207546 other downstream 46510 8853760 ~ 8857571 (-) False tufm
TU207545 other downstream 47124 8853760 ~ 8856957 (-) True tufm
TU207547 other downstream 47124 8853760 ~ 8856957 (-) False tufm
TU207525 other downstream 87805 8812342 ~ 8816276 (-) False natd1
TU207482 other downstream 171062 8731397 ~ 8733019 (-) True G153172
unassigned_transcript_737 other upstream 281722 9189384 ~ 9190066 (-) True LOC120574343
unassigned_transcript_738 other upstream 284324 9191986 ~ 9192402 (-) True LOC120574654
unassigned_transcript_739 other upstream 285956 9193618 ~ 9194157 (-) True LOC120574599
unassigned_transcript_740 other upstream 312879 9220541 ~ 9221072 (-) True LOC120574348
TU207903 other upstream 312955 9220617 ~ 9221090 (-) False LOC120574348

Expression Profile