LOC120574489


Basic Information

Item Value
gene id LOC120574489
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 11088206 ~ 11092146 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824828.1
AAAGTCTCACATGAGACTGAAGGAAACAGGAGGAGTACAACATGACTTAGCTTTGGTATTTCTTAGTGTGTTTATAACTGAAAAGGCCATGAAGACGAGCTTGGCATGTATTCTAatattcattcagctttttgaAGcCTCCACAGAGTTGATCTTTAGGCAGCTGACGGAGAGCCAGTCACTGGAGCTCTCCTGTTCCCCTCGGCTGGAGCGTAGCAGCCTGACGGCCCTCCACCTGTACCACCGCAGTGCCCAGAGCCAGATCACCCTGCTGTCCATGGCCGAGGGCGGCGAGCTGAGGGTCGACCTGGAATACCGAGGGCGGCTGCAGATCTGTGGAGGTCTGGACTCCCTGCAGGTCAATGTGACCATGTCCCATTTACAGCGCAGTGACACGGGACTCTACATGTGGGAGCTGAGATACAGAGAGAACAGCTCTAATCAGATCATCTTCAGTGCTCAAAAGGTGTTCTTGTTGGTTGAAGGGACAGGGAGGTCATGCCAGTGCTCTCCCAGTTACCCTCCTCTGCTCTTGACCATCTTTACAGTAACAGGGCTTCTTCTACTCACACTCAGCTGGCTGGCCACAGAGAAATGTGTGAAGGCGAGGAATCATCACAGACCACAACCTCCGGTTCCTATATATGAGGAAATGACCAGGAAGCAGCAGAGTGCCGGAATCCACCAAAATAACCCAGAGGCCCCATCACACCTGGAGGAAGTCAACTTCCCTGTGTACGCTAACTCCAACATCCGACAACCACAGGAAAACTATTACGCCTGTCCCAGACAGCTCGCCCTCAGAGCCTGACGTGACTTCTGGCAACATTCACAGGAAGACACCAGCTTTACTGCAGCAATATGAGACCGAGAGCCGACTTCTCATCCAGGAATTAAAAAAGATTGGTGGAAAAAAagccacagagacaaacacCAAATGGCACATTTTTAACAGCCAAGAAAAAAACCgctattttattaatattgaaaGAAGCTCCATAGTTCATGAAAACATTTGTTTCGGTGCATGTCATGTAACAATCACATTCTATGAGGAGAAAGatatacagagaaaaaaaaaaaaaaacattacaagcCACTGACTTTTCATAAATCTCAgtacatacatttttacttaatatttccaaaacaaaaaggcaaaaaaaaaaaaaaaagagaaaagaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824828.1 True 1189 mRNA 0.46 4 11088206 11092146

Neighbor

gene id symbol gene type direction distance location
LOC120574484 NA coding upstream 29983 11055103 ~ 11058223 (+)
rhot1a rhot1,LOC102207791,LOC103392922,LOC100690483,LOC102790665,LOC101469002,LOC105933022 coding upstream 33140 11037680 ~ 11055066 (+)
adap2 LOC104934589,LOC103360692 coding upstream 51574 11030860 ~ 11036632 (+)
atad5a NA coding upstream 57462 11017291 ~ 11030744 (+)
rfx1a LOC101471697,LOC103360694 coding upstream 84526 10992191 ~ 11003680 (+)
LOC120574067 NA coding downstream 110632 11202778 ~ 11209838 (+)
nup85 nup85 coding downstream 227103 11319249 ~ 11328213 (+)
mrps7 mrps7,LOC102783021 coding downstream 245905 11338051 ~ 11341483 (+)
slc25a19 slc25a19 coding downstream 256070 11348216 ~ 11351460 (+)
zgc:161969 LOC103361864,LOC104946073,LOC101481854,LOC100704716 coding downstream 370612 11462758 ~ 11465509 (+)
G153917 NA non-coding upstream 5499 11081649 ~ 11082707 (+)
G153916 NA non-coding upstream 7548 11079752 ~ 11080658 (+)
G153915 NA non-coding upstream 8526 11078455 ~ 11079680 (+)
G153872 NA non-coding upstream 79156 10973335 ~ 11009050 (+)
G153892 NA non-coding upstream 118362 10967630 ~ 10969844 (+)
G154038 sumo2 non-coding downstream 218279 11310425 ~ 11318493 (+)
G154051 NA non-coding downstream 260064 11352210 ~ 11352460 (+)
G154109 NA non-coding downstream 397760 11489906 ~ 11493649 (+)
G154124 LOC108239293,LOC104946078,LOC104918844,LOC101480216,LOC102194634,LOC100693182 non-coding downstream 406703 11498849 ~ 11501165 (+)
G154149 NA non-coding downstream 552010 11644156 ~ 11649921 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other upstream 14380 11063859 ~ 11073826 (+)
G153808 spag9 other upstream 335308 10752160 ~ 10752898 (+)
G153646 NA other upstream 746583 10250377 ~ 10341623 (+)
G153433 NA other upstream 1021464 10065460 ~ 10066742 (+)
LOC120574658 NA other upstream 1149602 9938019 ~ 9938604 (+)
LOC120574068 NA other downstream 114895 11207041 ~ 11225249 (+)
G154254 NA other downstream 993715 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other downstream 997227 12089373 ~ 12093558 (+)
G154461 NA other downstream 1751277 12843423 ~ 12846597 (+)
LOC120574968 LOC102294452 other downstream 1924813 13016959 ~ 13026416 (+)

Expression


Co-expression Network