LOC120574510


Basic Information

Item Value
gene id LOC120574510
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 16276452 ~ 16282540 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824873.1
CATCAATCAGGATCATCATTTCCATTGCACATACAATAGTTACATTCACGAAGTATTGAAAGGATTCTCCATCATTTACAGGAAGTACTTTTGTGTAACTTTCTGtactttttcacatttttatcaTCAATACGGGACTCATCCCCCtttttgcattatttttcaacatggCAGCTGCCGAAGTGGACTCAAAATCAGAAGCTACCGACACTGTGCTGGAAACTCCAGAACATGAGCAGATCATCAATATAATGAGTTACTCACAGCGTGGACGAATGGATGAACAGCGTTGCTCCTTGAGTCCTGTTAAAACTGGACTAATCAAAACTACACCTGCAGGTTCAATCTATGGGGGACAACACCTTAATGAACTGAGAGTGTCATTGCAAGGGTTAAACTACCAGGAACCTAGGAGTAATAATCATCACAGCTCTGCACCTCAGATTTCTGTGACAGAGAGTACTCCAGATAGAAACAGGAAGCTTCTGTTCGTACCAGACAACCAATTAAACGAAGAATTACCTGATGAACAACAGAAGTTCATGAATATGATCAGCCAAGTCCAGCCTGGATGCATGGACAACCAGAGCTGTTCCTTGGATTCAAGCAAGAGTGCTCCCtgcacacccaaacacacagacagaaagcctGCTGCATGTACATCAAACACagATCTAGATTCTGATATGTTGTTCAGCCTCTTGGCCAACACTCAGAGCCAACGGCTTGACGACCAGCGAGTGTCTCTTCCATCATTACCAGGATTACAAAAGGAGAATGCCACATCTACTGCAGTAGGGGATTCAAGCTACTTGTGTTACATGGTCTCTAAAGTCCAGGAATCCAGAATGGATGACCAAAGGTGCTCTCTACCTCAACTCCTAACCCCGGAAACCAAATGTTCACCAAAAAAGGATACATCTGCAACTGCTTCAGGCCCTCCACGTTCAGCCTCATTCAGCCCCGGCTCAAACATAGGTCGACCAAACACTAAAGATAAAGCATCTCAAAAACAGGCCTTGACTCCAGCCAAAGAGGAAGATTTTTTGTACTTAATGAGTCATTCCCAGCGTGGGCGAATGGATGAACAGCGATGTGTCTTAAATGTTAGCCCCCAGTCCACACCCAAGCACAAGCCCAGTCAGAGCACTTTGCCCAAAGGTCCAGATTCTGAAAAGTTCTTTACACTGCTGGCCAACTCTCAGGGCCAACGACTTGATGACCAGCGAGTGTCTCTTCCTTCGTTGCCAGGGATACAGAATGGAGGTACCACATCAACATCAACCGCTGCAGAGATGGATGCAAGCTACTTGTGTTCCATGGTCTCCAAAGTCCAGGGCTCAAGGATGGATGAACAGAGATGTTCTGCACCCCAAATCCTCCAAAATGTGGGGACCCCATTTACTCAACGCAAAGAGCATCCCAAATCAGACACATCTGATAAACCTCCCCAATGGTCGTCCTCTGATATCCGTGCCAAACCTGAACAACATCAGCAGGAGGCATCTCCAGCTGAAGAGGAGCAGTTCTTAAAAATGATAAGTCATGCACAAGATGGACGTATGGAAGAGCAACGCTGCTCTTTACAACCCAGCAGAAGTACACCAGCCACACCCATGCACAATGGAATTGCTTTAAATAGTGTAATCACAGGTGCAGACGCTAatgaattcttcaaaaccataGCCTCCAGTCAGGGACGACGGCTAGACGATCAGCGTGTTGCACTTCCGACCCTGCCAGGGATACATGGGAATTCTGAAATAAAGGAAAATGGTAGAAATGCAATGGCTGGAATCCCAGCTTCACCACCACACATCACTGTGGCTGAAAGTACACCAACAACATCAAGGAAGGACTGGTCCAGACCTGTCTCTCAATCCCAAATGGCTAATGCAGAGTCTGGCTCCCCCAGAACCCTACCCAAATCTGCTTCATTTACCACTGCAACAGAATATCAGAAGAATCTAAAATCCCCAGCACAGGTTACAGTGAGGGTGTCCATGAGCTTCACACCAGAGCAGGGACACATGAATATCAACCAACCATGTGCATTCCCAGAGGTCTTCCTCACTCTAGGAGCCCCTGGAGATAGCCTTGTGATCCCTCTGAGCCCACGACCTGGCAGACCCCTGTCCTTCAACTTGAACCTTGTCCCAAAAGAGACCAAGTCCAGGCACAGCTCTCCAAGCCGTGCAAGTCCCAGAAAAGCCCACTCAAGGTCGTCATCTCCCAACCAACATGAACAGGGGAGCATGACCAGCCCCATCAGTCCAGATGAAGACTACTTCTCTCTGATTGAGAAGGTTCACACATACCAGCTGCAGAAGGGAATGGCTCAAGGAGGACAAAAGTGGAAAGGGGATGCTGGAAAGGGGAGGGAAAAAGCTGAGCAAGGAAAGGGAAAGGGTGGTGGAAAGAAAGATAAGAAGGATGGTGGCAATAAACAATAGTCAGGTATGCCACAAATGATCTATTGAGGAAAGCAATAGAAATACAATGTGAGGTGTCTGTAATTGGCTTGGATGGAAAACAATTGATTGAACAATGTTTATAAAATTGTATCTGTATTTTTAATATACCCGCACTAATTAGAAGCTCTTGCTGTAGTACAACTCaactttattctgtttttattttcaggaCTGGGTAGGTTatggcattttatttatttattttcattgctGGTTAATGTTCCATATACATGTATTGTTTCAAGCTTAGTTGTGTGGATGAGAACTCATTGCTTtgctttttcaaatgtaaatgcaATGTGTACAGGTAAAGATAATACTGTTTAAGCTGCTTATCCAGAAAGAGAAATTGTAGAAAGGTTGGAATTAAACTTtggcaaaacatt
>XM_039824874.1
CATCAATCAGGATCATCATTTCCATTGCACATACAATAGTTACATTCACGAAGTATTGAAAGGATTCTCCATCATTTACAGGAAGTACTTTTGTGTAACTTTCTGtactttttcacatttttatcaTCAATACGGGACTCATCCCCCtttttgcattatttttcaacatggCAGCTGCCGAAGTGGACTCAAAATCAGAAGCTACCGACACTGTGCTGGAAACTCCAGAACATGAGCAGATCATCAATATAATGAGTTACTCACAGCGTGGACGAATGGATGAACAGCGTTGCTCCTTGAGTCCTGTTAAAACTGGACTAATCAAAACTACACCTGCAGGTTCAATCTATGGGGGACAACACCTTAATGAACTGAGAGTGTCATTGCAAGGGTTAAACTACCAGGAAGAATTACCTGATGAACAACAGAAGTTCATGAATATGATCAGCCAAGTCCAGCCTGGATGCATGGACAACCAGAGCTGTTCCTTGGATTCAAGCAAGAGTGCTCCCtgcacacccaaacacacagacagaaagcctGCTGCATGTACATCAAACACagATCTAGATTCTGATATGTTGTTCAGCCTCTTGGCCAACACTCAGAGCCAACGGCTTGACGACCAGCGAGTGTCTCTTCCATCATTACCAGGATTACAAAAGGAGAATGCCACATCTACTGCAGTAGGGGATTCAAGCTACTTGTGTTACATGGTCTCTAAAGTCCAGGAATCCAGAATGGATGACCAAAGGTGCTCTCTACCTCAACTCCTAACCCCGGAAACCAAATGTTCACCAAAAAAGGATACATCTGCAACTGCTTCAGGCCCTCCACGTTCAGCCTCATTCAGCCCCGGCTCAAACATAGGTCGACCAAACACTAAAGATAAAGCATCTCAAAAACAGGCCTTGACTCCAGCCAAAGAGGAAGATTTTTTGTACTTAATGAGTCATTCCCAGCGTGGGCGAATGGATGAACAGCGATGTGTCTTAAATGTTAGCCCCCAGTCCACACCCAAGCACAAGCCCAGTCAGAGCACTTTGCCCAAAGGTCCAGATTCTGAAAAGTTCTTTACACTGCTGGCCAACTCTCAGGGCCAACGACTTGATGACCAGCGAGTGTCTCTTCCTTCGTTGCCAGGGATACAGAATGGAGGTACCACATCAACATCAACCGCTGCAGAGATGGATGCAAGCTACTTGTGTTCCATGGTCTCCAAAGTCCAGGGCTCAAGGATGGATGAACAGAGATGTTCTGCACCCCAAATCCTCCAAAATGTGGGGACCCCATTTACTCAACGCAAAGAGCATCCCAAATCAGACACATCTGATAAACCTCCCCAATGGTCGTCCTCTGATATCCGTGCCAAACCTGAACAACATCAGCAGGAGGCATCTCCAGCTGAAGAGGAGCAGTTCTTAAAAATGATAAGTCATGCACAAGATGGACGTATGGAAGAGCAACGCTGCTCTTTACAACCCAGCAGAAGTACACCAGCCACACCCATGCACAATGGAATTGCTTTAAATAGTGTAATCACAGGTGCAGACGCTAatgaattcttcaaaaccataGCCTCCAGTCAGGGACGACGGCTAGACGATCAGCGTGTTGCACTTCCGACCCTGCCAGGGATACATGGGAATTCTGAAATAAAGGAAAATGGTAGAAATGCAATGGCTGGAATCCCAGCTTCACCACCACACATCACTGTGGCTGAAAGTACACCAACAACATCAAGGAAGGACTGGTCCAGACCTGTCTCTCAATCCCAAATGGCTAATGCAGAGTCTGGCTCCCCCAGAACCCTACCCAAATCTGCTTCATTTACCACTGCAACAGAATATCAGAAGAATCTAAAATCCCCAGCACAGGTTACAGTGAGGGTGTCCATGAGCTTCACACCAGAGCAGGGACACATGAATATCAACCAACCATGTGCATTCCCAGAGGTCTTCCTCACTCTAGGAGCCCCTGGAGATAGCCTTGTGATCCCTCTGAGCCCACGACCTGGCAGACCCCTGTCCTTCAACTTGAACCTTGTCCCAAAAGAGACCAAGTCCAGGCACAGCTCTCCAAGCCGTGCAAGTCCCAGAAAAGCCCACTCAAGGTCGTCATCTCCCAACCAACATGAACAGGGGAGCATGACCAGCCCCATCAGTCCAGATGAAGACTACTTCTCTCTGATTGAGAAGGTTCACACATACCAGCTGCAGAAGGGAATGGCTCAAGGAGGACAAAAGTGGAAAGGGGATGCTGGAAAGGGGAGGGAAAAAGCTGAGCAAGGAAAGGGAAAGGGTGGTGGAAAGAAAGATAAGAAGGATGGTGGCAATAAACAATAGTCAGGTATGCCACAAATGATCTATTGAGGAAAGCAATAGAAATACAATGTGAGGTGTCTGTAATTGGCTTGGATGGAAAACAATTGATTGAACAATGTTTATAAAATTGTATCTGTATTTTTAATATACCCGCACTAATTAGAAGCTCTTGCTGTAGTACAACTCaactttattctgtttttattttcaggaCTGGGTAGGTTatggcattttatttatttattttcattgctGGTTAATGTTCCATATACATGTATTGTTTCAAGCTTAGTTGTGTGGATGAGAACTCATTGCTTtgctttttcaaatgtaaatgcaATGTGTACAGGTAAAGATAATACTGTTTAAGCTGCTTATCCAGAAAGAGAAATTGTAGAAAGGTTGGAATTAAACTTtggcaaaacatt
>XM_039824875.1
CATCAATCAGGATCATCATTTCCATTGCACATACAATAGTTACATTCACGAAGTATTGAAAGGATTCTCCATCATTTACAGGAAGTACTTTTGTGTAACTTTCTGtactttttcacatttttatcaTCAATACGGGACTCATCCCCCtttttgcattatttttcaacatggCAGCTGCCGAAGTGGACTCAAAATCAGAAGCTACCGACACTGTGCTGGAAACTCCAGAACATGAGCAGATCATCAATATAATGAGTTACTCACAGCGTGGACGAATGGATGAACAGCGTTGCTCCTTGAGTCCTGTTAAAACTGGACTAATCAAAACTACACCTGCAGGTTGGGACAGCAGATACAGATATACCATCAGCAGTGAAGAATTACCTGATGAACAACAGAAGTTCATGAATATGATCAGCCAAGTCCAGCCTGGATGCATGGACAACCAGAGCTGTTCCTTGGATTCAAGCAAGAGTGCTCCCtgcacacccaaacacacagacagaaagcctGCTGCATGTACATCAAACACagATCTAGATTCTGATATGTTGTTCAGCCTCTTGGCCAACACTCAGAGCCAACGGCTTGACGACCAGCGAGTGTCTCTTCCATCATTACCAGGATTACAAAAGGAGAATGCCACATCTACTGCAGTAGGGGATTCAAGCTACTTGTGTTACATGGTCTCTAAAGTCCAGGAATCCAGAATGGATGACCAAAGGTGCTCTCTACCTCAACTCCTAACCCCGGAAACCAAATGTTCACCAAAAAAGGATACATCTGCAACTGCTTCAGGCCCTCCACGTTCAGCCTCATTCAGCCCCGGCTCAAACATAGGTCGACCAAACACTAAAGATAAAGCATCTCAAAAACAGGCCTTGACTCCAGCCAAAGAGGAAGATTTTTTGTACTTAATGAGTCATTCCCAGCGTGGGCGAATGGATGAACAGCGATGTGTCTTAAATGTTAGCCCCCAGTCCACACCCAAGCACAAGCCCAGTCAGAGCACTTTGCCCAAAGGTCCAGATTCTGAAAAGTTCTTTACACTGCTGGCCAACTCTCAGGGCCAACGACTTGATGACCAGCGAGTGTCTCTTCCTTCGTTGCCAGGGATACAGAATGGAGGTACCACATCAACATCAACCGCTGCAGAGATGGATGCAAGCTACTTGTGTTCCATGGTCTCCAAAGTCCAGGGCTCAAGGATGGATGAACAGAGATGTTCTGCACCCCAAATCCTCCAAAATGTGGGGACCCCATTTACTCAACGCAAAGAGCATCCCAAATCAGACACATCTGATAAACCTCCCCAATGGTCGTCCTCTGATATCCGTGCCAAACCTGAACAACATCAGCAGGAGGCATCTCCAGCTGAAGAGGAGCAGTTCTTAAAAATGATAAGTCATGCACAAGATGGACGTATGGAAGAGCAACGCTGCTCTTTACAACCCAGCAGAAGTACACCAGCCACACCCATGCACAATGGAATTGCTTTAAATAGTGTAATCACAGGTGCAGACGCTAatgaattcttcaaaaccataGCCTCCAGTCAGGGACGACGGCTAGACGATCAGCGTGTTGCACTTCCGACCCTGCCAGGGATACATGGGAATTCTGAAATAAAGGAAAATGGTAGAAATGCAATGGCTGGAATCCCAGCTTCACCACCACACATCACTGTGGCTGAAAGTACACCAACAACATCAAGGAAGGACTGGTCCAGACCTGTCTCTCAATCCCAAATGGCTAATGCAGAGTCTGGCTCCCCCAGAACCCTACCCAAATCTGCTTCATTTACCACTGCAACAGAATATCAGAAGAATCTAAAATCCCCAGCACAGGTTACAGTGAGGGTGTCCATGAGCTTCACACCAGAGCAGGGACACATGAATATCAACCAACCATGTGCATTCCCAGAGGTCTTCCTCACTCTAGGAGCCCCTGGAGATAGCCTTGTGATCCCTCTGAGCCCACGACCTGGCAGACCCCTGTCCTTCAACTTGAACCTTGTCCCAAAAGAGACCAAGTCCAGGCACAGCTCTCCAAGCCGTGCAAGTCCCAGAAAAGCCCACTCAAGGTCGTCATCTCCCAACCAACATGAACAGGGGAGCATGACCAGCCCCATCAGTCCAGATGAAGACTACTTCTCTCTGATTGAGAAGGTTCACACATACCAGCTGCAGAAGGGAATGGCTCAAGGAGGACAAAAGTGGAAAGGGGATGCTGGAAAGGGGAGGGAAAAAGCTGAGCAAGGAAAGGGAAAGGGTGGTGGAAAGAAAGATAAGAAGGATGGTGGCAATAAACAATAGTCAGGTATGCCACAAATGATCTATTGAGGAAAGCAATAGAAATACAATGTGAGGTGTCTGTAATTGGCTTGGATGGAAAACAATTGATTGAACAATGTTTATAAAATTGTATCTGTATTTTTAATATACCCGCACTAATTAGAAGCTCTTGCTGTAGTACAACTCaactttattctgtttttattttcaggaCTGGGTAGGTTatggcattttatttatttattttcattgctGGTTAATGTTCCATATACATGTATTGTTTCAAGCTTAGTTGTGTGGATGAGAACTCATTGCTTtgctttttcaaatgtaaatgcaATGTGTACAGGTAAAGATAATACTGTTTAAGCTGCTTATCCAGAAAGAGAAATTGTAGAAAGGTTGGAATTAAACTTtggcaaaacatt

Function

GO:

id name namespace
GO:0050877 nervous system process biological_process
GO:0050953 sensory perception of light stimulus biological_process
GO:0007600 sensory perception biological_process
GO:0007601 visual perception biological_process
GO:0003008 system process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824873.1 True 2860 mRNA 0.45 15 16276452 16282540
XM_039824874.1 False 2752 mRNA 0.45 14 16276452 16282540
XM_039824875.1 False 2722 mRNA 0.45 13 16276452 16282540

Neighbor

gene id symbol gene type direction distance location
stxbp2 stxbp2 coding upstream 1394 16262716 ~ 16275058 (+)
pbx4 pbx4 coding upstream 68293 16175893 ~ 16208159 (+)
LOC120574533 NA coding upstream 103341 16168431 ~ 16173111 (+)
atp13a1 atp13a1 coding upstream 110377 16156233 ~ 16166075 (+)
lmx1al LOC104952501,LOC103364142 coding upstream 122738 16136066 ~ 16153714 (+)
xab2 xab2 coding downstream 23686 16306226 ~ 16314296 (+)
LOC120574536 LOC107711259,LOC102297959,LOC104952486,LOC100696339,LOC103358202 coding downstream 80719 16363259 ~ 16366875 (+)
LOC120574433 ppan,LOC104950896 coding downstream 347102 16629642 ~ 16636386 (+)
eif3g eif3g coding downstream 356630 16639170 ~ 16642131 (+)
LOC120574434 LOC104950876,LOC103358219,LOC102307478,LOC101467188,LOC102778330,LOC107083064 coding downstream 426925 16709465 ~ 16733136 (+)
G155393 NA non-coding upstream 35370 16216514 ~ 16241082 (+)
G155384 NA non-coding upstream 75340 16158651 ~ 16201112 (+)
G155342 adgrl1,LOC103392844 non-coding upstream 375930 15893874 ~ 15900522 (+)
G155346 NA non-coding upstream 384418 15891095 ~ 15892034 (+)
G155257 NA non-coding upstream 544637 15661368 ~ 15731815 (+)
G155413 NA non-coding downstream 32226 16314766 ~ 16314974 (+)
G155602 NA non-coding downstream 370393 16652933 ~ 16653513 (+)
G155616 NA non-coding downstream 435636 16718176 ~ 16722663 (+)
G155677 NA non-coding downstream 556383 16838923 ~ 16840294 (+)
G155688 LOC100174873 non-coding downstream 642523 16925063 ~ 16932234 (+)
LOC120574544 pet100 other upstream 14394 16259684 ~ 16262058 (+)
LOC120574525 NA other upstream 385424 15887175 ~ 15891028 (+)
rasd2 NA other upstream 747982 15526854 ~ 15528470 (+)
arl16 arl16 other upstream 763642 15510093 ~ 15512810 (+)
ndel1b ndel1,LOC104940291 other upstream 871847 15366920 ~ 15404605 (+)
camsap3 NA other downstream 33292 16315832 ~ 16387522 (+)
col5a3a col5a3,LOC104952480,LOC102201017,LOC101485068,LOC102299321,LOC100695815,LOC107378343,LOC108243746 other downstream 168693 16451233 ~ 16501704 (+)
olfm2a olfm2,LOC104918560,LOC107378344,LOC100706999 other downstream 238442 16520982 ~ 16563997 (+)
cmc4 NA other downstream 450916 16733456 ~ 16734344 (+)
raver1 NA other downstream 475105 16757645 ~ 16769241 (+)

Expression


Co-expression Network