stxbp2 (stxbp2)


Basic Information

Item Value
gene id stxbp2
gene name stxbp2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 16262716 ~ 16275058 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824882.1
GCTGTCAAAAGCTGTGTGCTAGAACCATACAGGCTTTGCAACAACAAGGAAGTGACCGACGAGAGAGAAGCCAGCAGACTGCTGTCAAGATGGCACCGAGTGGGCTGAAAGCGGTAGTAGGAGAAAAAATCCTCAATGGGGTCATTAAGAGTGTGAAGAAGGATGGAGAATGGAAGGTTCTTATCGTGGATCACATGAGCATGCGAATTCTGTCCTCTTGCTGCAAGATGTCTGACATTTTGGCAGAGGGGGTTACCATTGTGGAGGACATCAATAAACGTAGGGAGCCCATCTCTAGTTTGGAGGCCATTTATTTGATTTCACCTGTGGAGAAGTCAGTCCGTGCTCTTATTAACGACTTCAAAGATGCTGCCTTTACTTACAAAGCAGCACACATCTTCTTCACTGAtaCTTGTCCAGATGGTCTCTTTGCCGAGATTGGTAGATCCAGAGTTTCCAAGGTCGTCAAGACTTTAAAAGAGATCAACGTTGCTTTCCTGCCTTATGAGGCTCAGGTATTCTCCCTGGATGATCCAAACTCCTTGTACTCCTTCTACAGTTCTAAgccaaataaagataaagacaAAATTATGGAAAATCTGGCGGAGCAGATTGCAACCCTGTGTGACACACTTAAGGAGTACCCTGCAATCCGTTACCGCAAGGGACCAGAGGACAATGCTAGACTGGCTGATGAGGTCTACCAGCGCCTTACCGCTCATAAAGCTGACAACCCAAGCATGGGAGAGGGTGCAGATAAGGCGAGATCCCAGCTACTGATTGTTGATCGTGGGTTTGATCCCATCTCCCCTATTCTACATGAGTTGACCTTCCAGGCGATGGCCTACGACTTGCTAGATATCAAACAAGACATCTATAGtTATCAGACAACTGGCATTGGGAATTCGAATGACCGAGAAGTATTATTGGATGAAGATGATGAGCTCTGGGTTCAGCTCAGACATATGCACATTGCTGATGTCACTAAGAAAGTGACAGAGCTTCTGCGCACCTTTTGTGAGAGCAAGAGAATGTGCACTGACAATGCCAACTTAAAAGATCTCTCTCAGATGTTAAAGAAGATGCCACAGTATCAAAAGGAGCTGAGCATGTACTCTACTCACTTGCACCTAGCCGAAGCTTGTATGAAGAAATTTAAGGGCTCTGTTGATAAGCTTTGTGAAGTGGAACAGGACCTGGCAATGGGAGCAAATGCAGAAGGGGAACCTCTGAAGGATGCCATGAAGAGCATTGTTCCTGTGCTCCTGAACAATGAAATTGGGGCCTATGAGAAAATCCGCATCATACTGCTGTACATATTCCACAAGAAAAAAGGCATCGGGGAGGAGAACCTTGCCAAGCTCATCCAGCATGCAAACATACAGGCCGACAGTAACATCATCACCAATCTGCAGAACCTGGGCTGTAACATTATAGCTGGGGGCCGCAATGCAGAGCAAACTCTGCCTGAGCGGAGGGAGCGCACAGAGAGCACGTACCAGCTCTCTAGATGGGCACCCATAATCAAAGATGTCATGGAGAATGCCATCGAGGACAAACTGGACAGAAAGCAGTGGCCATTCATCTCTGATCCTGCTCCCATCAACACAACTCAGACTGCAGTCAGCAGTGCACGTTTTGGACACTGGCACAAAAATAAATCTCCCACAGAATATCGCTCTGGCCCTCGACTTATTATATTTGTGATTGGTGGGGTGTCACAGTCAGAGATGCGCTCTGCCTATGAAGTCACTCGAGCCACTGACGGGAAATGGGAAGTGCTGATTGGGTCTTCTCACATCCTGACTCCAACCAGCTTCCTTAATGACCTGAAGAGTCTGGACCAAGTTCCTAATCCGGATAGTTAGATAGTTAGACCCTGAACGGAGAAGAACACACTGGAATAAGGGTTTAGTCTTTCATTTGAGATGACTGGTTGCTGATCTTCTGTCACAGCCTCTCCGACGTCTAAAGTGATGCATGAGGAGAAAGCTTTGATGTAGCCGTGGATGGAAACTTGTGATTCTTTATTTGTTTTAGAATAGtcgttttgttgtttattgtgaATTGGGTTCTGTGTACTGCTGTgattaaaattgtattaaaatatttaattagacattattaatattttgattattttactATTCTCattcaaattataattttttgttaCTAAATTATATGAGATTTCCCTAATTTTGCTTTCAAACAATTGCATCTTTCCCACAAAACTGGATCATGTCACACCAAAAATCTTATCAAGTCTAATGTAGATGTATATAAGTCATGTCAAAGTAGGTATTGTATATTCATTGAGGTTAAGTGTGAAATaccttctgtttttttctctagGTACATTTCTTTCCTTGTCTGGGTAATTTAATTTTAGACAAAATGTCTCAACTGCTGTTTTATGAAATCTTGCACATTTACCATATACTTTAATATATAGCTGGAAGTAAGTATGGTGGGTGTTTGCTTCTTTGATGTTAAAGATAAGTAATAAAGAAACATGATATTCACTTTAAa
>XM_039824883.1
GCTGTCAAAAGCTGTGTGCTAGAACCATACAGGCTTTGCAACAACAAGGAAGTGACCGACGAGAGAGAAGCCAGCAGACTGCTGTCAAGATGGCACCGAGTGGGCTGAAAGCGGTAGTAGGAGAAAAAATCCTCAATGGGGTCATTAAGAGTGTGAAGAAGGATGGAGAATGGAAGGTTCTTATCGTGGATCACATGAGCATGCGAATTCTGTCCTCTTGCTGCAAGATGTCTGACATTTTGGCAGAGGGGGTTACCATTGTGGAGGACATCAATAAACGTAGGGAGCCCATCTCTAGTTTGGAGGCCATTTATTTGATTTCACCTGTGGAGAAGTCAGTCCGTGCTCTTATTAACGACTTCAAAGATGCTGCCTTTACTTACAAAGCAGCACACATCTTCTTCACTGAtaCTTGTCCAGATGGTCTCTTTGCCGAGATTGGTAGATCCAGAGTTTCCAAGGTCGTCAAGACTTTAAAAGAGATCAACGTTGCTTTCCTGCCTTATGAGGCTCAGGTATTCTCCCTGGATGATCCAAACTCCTTGTACTCCTTCTACAGTTCTAAgccaaataaagataaagacaAAATTATGGAAAATCTGGCGGAGCAGATTGCAACCCTGTGTGACACACTTAAGGAGTACCCTGCAATCCGTTACCGCAAGGGACCAGAGGACAATGCTAGACTGGCTGATGAGGTCTACCAGCGCCTTACCGCTCATAAAGCTGACAACCCAAGCATGGGAGAGGGTGCAGATAAGGCGAGATCCCAGCTACTGATTGTTGATCGTGGGTTTGATCCCATCTCCCCTATTCTACATGAGTTGACCTTCCAGGCGATGGCCTACGACTTGCTAGATATCAAACAAGACATCTATAGtTATCAGACAACTGGCATTGGGAATTCGAATGACCGAGAAGTATTATTGGATGAAGATGATGAGCTCTGGGTTCAGCTCAGACATATGCACATTGCTGATGTCACTAAGAAAGTGACAGAGCTTCTGCGCACCTTTTGTGAGAGCAAGAGAATGTGCACTGACAATGCCAACTTAAAAGATCTCTCTCAGATGTTAAAGAAGATGCCACAGTATCAAAAGGAGCTGAGCATGTACTCTACTCACTTGCACCTAGCCGAAGCTTGTATGAAGAAATTTAAGGGCTCTGTTGATAAGCTTTGTGAAGTGGAACAGGACCTGGCAATGGGAGCAAATGCAGAAGGGGAACCTCTGAAGGATGCCATGAAGAGCATTGTTCCTGTGCTCCTGAACAATGAAATTGGGGCCTATGAGAAAATCCGCATCATACTGCTGTACATATTCCACAAGAAAAAAGGCATCGGGGAGGAGAACCTTGCCAAGCTCATCCAGCATGCAAACATACAGGCCGACAGTAACATCATCACCAATCTGCAGAACCTGGGCTGTAACATTATAGCTGGGGGCCGCAATGCAGAGCAAACTCTGCCTGAGCGGAGGGAGCGCACAGAGAGCACGTACCAGCTCTCTAGATGGGCACCCATAATCAAAGATGTCATGGAGAATGCCATCGAGGACAAACTGGACAGAAAGCAGTGGCCATTCATCTCTGATCCTGCTCCCATCAACACAACTCAGACTGCAGTCAGTGCACGTTTTGGACACTGGCACAAAAATAAATCTCCCACAGAATATCGCTCTGGCCCTCGACTTATTATATTTGTGATTGGTGGGGTGTCACAGTCAGAGATGCGCTCTGCCTATGAAGTCACTCGAGCCACTGACGGGAAATGGGAAGTGCTGATTGGGTCTTCTCACATCCTGACTCCAACCAGCTTCCTTAATGACCTGAAGAGTCTGGACCAAGTTCCTAATCCGGATAGTTAGATAGTTAGACCCTGAACGGAGAAGAACACACTGGAATAAGGGTTTAGTCTTTCATTTGAGATGACTGGTTGCTGATCTTCTGTCACAGCCTCTCCGACGTCTAAAGTGATGCATGAGGAGAAAGCTTTGATGTAGCCGTGGATGGAAACTTGTGATTCTTTATTTGTTTTAGAATAGtcgttttgttgtttattgtgaATTGGGTTCTGTGTACTGCTGTgattaaaattgtattaaaatatttaattagacattattaatattttgattattttactATTCTCattcaaattataattttttgttaCTAAATTATATGAGATTTCCCTAATTTTGCTTTCAAACAATTGCATCTTTCCCACAAAACTGGATCATGTCACACCAAAAATCTTATCAAGTCTAATGTAGATGTATATAAGTCATGTCAAAGTAGGTATTGTATATTCATTGAGGTTAAGTGTGAAATaccttctgtttttttctctagGTACATTTCTTTCCTTGTCTGGGTAATTTAATTTTAGACAAAATGTCTCAACTGCTGTTTTATGAAATCTTGCACATTTACCATATACTTTAATATATAGCTGGAAGTAAGTATGGTGGGTGTTTGCTTCTTTGATGTTAAAGATAAGTAATAAAGAAACATGATATTCACTTTAAa

Function

symbol description
stxbp2 Predicted to enable syntaxin-1 binding activity and syntaxin-3 binding activity. Predicted to be involved in intracellular protein transport; neurotransmitter secretion; and vesicle docking involved in exocytosis. Predicted to act upstream of or within protein transport. Predicted to be active in plasma membrane and secretory granule. Is expressed in brain; epidermis; liver; periderm; and sensory system. Human ortholog(s) of this gene implicated in familial hemophagocytic lymphohistiocytosis 5. Orthologous to human STXBP2 (syntaxin binding protein 2).

NR:

description
syntaxin-binding protein 2-like isoform X2

GO:

id name namespace
GO:0006904 vesicle docking involved in exocytosis biological_process

KEGG:

id description
K15300 STXBP2, MUNC18-2; syntaxin-binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824882.1 True 2532 mRNA 0.43 19 16262716 16275058
XM_039824883.1 False 2529 mRNA 0.43 19 16262716 16275058

Neighbor

gene id symbol gene type direction distance location
pbx4 pbx4 coding upstream 54557 16175893 ~ 16208159 (+)
LOC120574533 NA coding upstream 89605 16168431 ~ 16173111 (+)
atp13a1 atp13a1 coding upstream 96641 16156233 ~ 16166075 (+)
lmx1al LOC104952501,LOC103364142 coding upstream 109002 16136066 ~ 16153714 (+)
LOC120574504 gmip coding upstream 126977 16119109 ~ 16135739 (+)
LOC120574510 NA coding downstream 1394 16276452 ~ 16282540 (+)
xab2 xab2 coding downstream 31168 16306226 ~ 16314296 (+)
LOC120574536 LOC107711259,LOC102297959,LOC104952486,LOC100696339,LOC103358202 coding downstream 88201 16363259 ~ 16366875 (+)
LOC120574433 ppan,LOC104950896 coding downstream 354584 16629642 ~ 16636386 (+)
eif3g eif3g coding downstream 364112 16639170 ~ 16642131 (+)
G155393 NA non-coding upstream 21634 16216514 ~ 16241082 (+)
G155384 NA non-coding upstream 61604 16158651 ~ 16201112 (+)
G155342 adgrl1,LOC103392844 non-coding upstream 362194 15893874 ~ 15900522 (+)
G155346 NA non-coding upstream 370682 15891095 ~ 15892034 (+)
G155257 NA non-coding upstream 530901 15661368 ~ 15731815 (+)
G155413 NA non-coding downstream 39708 16314766 ~ 16314974 (+)
G155602 NA non-coding downstream 377875 16652933 ~ 16653513 (+)
G155616 NA non-coding downstream 443118 16718176 ~ 16722663 (+)
G155677 NA non-coding downstream 563865 16838923 ~ 16840294 (+)
G155688 LOC100174873 non-coding downstream 650005 16925063 ~ 16932234 (+)
LOC120574544 pet100 other upstream 658 16259684 ~ 16262058 (+)
LOC120574525 NA other upstream 371688 15887175 ~ 15891028 (+)
rasd2 NA other upstream 734246 15526854 ~ 15528470 (+)
arl16 arl16 other upstream 749906 15510093 ~ 15512810 (+)
ndel1b ndel1,LOC104940291 other upstream 858111 15366920 ~ 15404605 (+)
camsap3 NA other downstream 40774 16315832 ~ 16387522 (+)
col5a3a col5a3,LOC104952480,LOC102201017,LOC101485068,LOC102299321,LOC100695815,LOC107378343,LOC108243746 other downstream 176175 16451233 ~ 16501704 (+)
olfm2a olfm2,LOC104918560,LOC107378344,LOC100706999 other downstream 245924 16520982 ~ 16563997 (+)
cmc4 NA other downstream 458398 16733456 ~ 16734344 (+)
raver1 NA other downstream 482587 16757645 ~ 16769241 (+)

Expression


Co-expression Network