LOC120574840


Basic Information

Item Value
gene id LOC120574840
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 11783397 ~ 11786551 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825288.1
TTGATTACTCAGCTCCTGATTGGTTGACAAAGAAGAAGCGGTATTTGACGGTCAAATTCCGGCACTGTCATTATAATAGTTTGGCTGAAGTGGAGCTGTAATGGATAGAGAGAGGCTAACTGAAGCTGTGGGTcttctaaataatattttagGAAATGGTGAGCTATTGTCAACGATGTCTCGACAATTAAATTAAGTCCAACAGAGCTCTGATTCGGAGATGCAGAGATTATTCAGGGGTGGAACTGTAAATCCAGTCAGACCTGGCTCCAGgctagcactgctacttctagctagctagctcaatgGAACACGGAGGACCCCGTTACCAGACGAGACAGCGTTTCGGTGGATCGTCGTCGAAATCCAGGAAGAGATTATCTGGCCAATGCTGGGCGTCTAAGGCCTTTGAAACGCATAGAAGACAAAGATCTCTTGGTGGAGGATATCATCATGTTTCAGCTGGTTCATCGAGTTAGTGGAGCACTTCAAAGgTTCAGGGAGGGGATGAAGACCCTTGGTGTTCTTGATGCAATAAGAATGCACCCAGATGCTTTCAGACCGCTGTTTTGTCACGAGCCATCCCCACTCACAGCGGATGTACTAGAACGGTCAGCAGTGGGCAGGAACAAAAGAAGGGCAGAGGAATGTGTGGCTGCATTTTGGAGGGACTACCTGCTGGATGTTGAGGaGCAAGAGGGACCCTTGCAACTTGGGGGTATCCTGGCCTTTACGACGGGAGCAAATGATATTCCACCCCTGGGCTTCTCCCCACTACCTTCAGTGGTTTTTCTCCATGAGCTGCCCCTCATTTACCCACCGCAAACACATGCATTAACTGCCTGCGGTTGCCAGTCCTGAAAAAATTCGAGGATTTTAAGGAAACTATggattttgcattaaaaaacacTCAGGGATTTGGTCAGGAATGACTTCCAAGAAGTCCttaatatacattattaaaatCTGTTGCCTGTTGAACTTGACTAAATTGAAGAGGCATCGTTGTCAATAACTCACCATTTcctaatacattattaatgtcttgtttaaacaattaaaaatggaaTAATCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825288.1 True 1077 mRNA 0.45 4 11783397 11786551

Neighbor

gene id symbol gene type direction distance location
LOC120574416 NA coding upstream 145765 11635618 ~ 11637632 (+)
bri3 bri3 coding upstream 225669 11551967 ~ 11557728 (+)
lmtk2 lmtk2 coding upstream 250645 11502283 ~ 11532752 (+)
zgc:161969 LOC103361864,LOC104946073,LOC101481854,LOC100704716 coding upstream 317888 11462758 ~ 11465509 (+)
slc25a19 slc25a19 coding upstream 431937 11348216 ~ 11351460 (+)
fam20ca LOC103361753,LOC100706308,LOC102196831,LOC101477115 coding downstream 83402 11869953 ~ 11905482 (+)
LOC120574417 rai1 coding downstream 129553 11916104 ~ 11968837 (+)
drc3 NA coding downstream 222287 12008838 ~ 12013380 (+)
gid4 gid4 coding downstream 227301 12013852 ~ 12019116 (+)
noxo1a NA coding downstream 236531 12023082 ~ 12027201 (+)
LOC120574841 NA non-coding upstream 87938 11691908 ~ 11695459 (+)
G154149 NA non-coding upstream 133476 11644156 ~ 11649921 (+)
G154124 LOC108239293,LOC104946078,LOC104918844,LOC101480216,LOC102194634,LOC100693182 non-coding upstream 282232 11498849 ~ 11501165 (+)
G154109 NA non-coding upstream 289748 11489906 ~ 11493649 (+)
G154051 NA non-coding upstream 430937 11352210 ~ 11352460 (+)
G154186 NA non-coding downstream 41162 11827713 ~ 11827921 (+)
G154193 srebf1 non-coding downstream 139570 11926121 ~ 11971275 (+)
G154204 NA non-coding downstream 188468 11975019 ~ 11975712 (+)
G154215 NA non-coding downstream 233727 12020278 ~ 12020508 (+)
G154225 LOC105933046,LOC101076874,LOC102218385,LOC106948144,LOC103469244,LOC103141651 non-coding downstream 277419 12063970 ~ 12064272 (+)
LOC120574068 NA other upstream 558148 11207041 ~ 11225249 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other upstream 709571 11063859 ~ 11073826 (+)
G153808 spag9 other upstream 1030499 10752160 ~ 10752898 (+)
G153646 NA other upstream 1441774 10250377 ~ 10341623 (+)
G153433 NA other upstream 1716655 10065460 ~ 10066742 (+)
G154254 NA other downstream 299310 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other downstream 302822 12089373 ~ 12093558 (+)
G154461 NA other downstream 1056872 12843423 ~ 12846597 (+)
LOC120574968 LOC102294452 other downstream 1230408 13016959 ~ 13026416 (+)
vasnb vasn other downstream 1869464 13656015 ~ 13692303 (+)

Expression


Co-expression Network