LOC120574871 (rasd1,LOC101484812,LOC104918344,LOC106942351,LOC103468867,LOC103373502,LOC103140985,LOC103393006)


Basic Information

Item Value
gene id LOC120574871
gene name rasd1,LOC101484812,LOC104918344,LOC106942351,LOC103468867,LOC103373502,LOC103140985,LOC103393006
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14054552 ~ 14055843 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825358.1
TCAGAGAGATAGCGAGGTTAAATCCCTCACGTTACTAAAAGGACTTTAAACCCATTTCTTGCTTTCGCATCGACCTTCGGGTGCAACTGCTGCATGATTAAGAAAATGTCACCACCTGAGAATGAGTTTTACATACCGGCCAAGAATTGCCACAGGATGGTGATTCTGGGCTCCACTAAAGTTGGGAAGACAGCCATCATCTCTAGGTTTCTGAACGAGAGAGTTGAAGATCAGTACACACCCACTATTGAGGACTTTCATAGGAAATTCTACAGCATCAGGGGAGACGTTTACCAGCTGGACATTTTGGACACATCTGGAAATCATCCTTTCCCTGCAATGAGGAGGCTTTCAATTCTTACCGGTGATGTGTTCATCTTGGTGTTCAGCCTGGACAACAGAGACTCCTTCCAGGAGGTGCAGCGCCTGAAACGTCAGATTTATGAGACCAAGTCCTGCCTGCGAAACAAAACCAAGGAGAACGTGGAGGTCCCGCTGGTCATCTGCGGCAACAAATGTGACAGAGACTTTTACCGTGAGGTGCAGGAGGACGAGATCGAGCAGCTGGTTGGTGGAGACGAGCACTGCGCTTACTTTGAAGTCTCAGCAAAGAAGAACACTAACGTGGACCAAATGTTTCAGACTCTCTTTACCATGGCCAAGCTGCCCAACGAAATGAGCCCCGATCGGCACTGCAAAGTTTCCGTGCAGTACTGCGAGATTCTTCACAGAAAGTCCTTCAGAAACAAGAAGTGCAAAGATGGAAATGCATACGGGAGTGTGGCGCCGTTTGCACAGAGACCCAGCGTGCACAGTGATTTGATGTACATAAAGGAGAAAGCTATTGGAGGCAGGCAGACCAAAGAAAAAGGCTGCATCATATGCTgacattttctttgtctttgtgaaAGAGACTTTTTGTGAGACTTTCCAGAGCTGAAGCTGAGCCGTTCTGCAGGGCAACATATGCCCAAATACTCTAGACTTCAGCGCCAGAGACTCAATGATTTAAACTACGATGAGACACATGGGGAAAGTGGCTCAGCTCATAGGCCTATCACCAGTGTAGTGAATGATGCAGTAGTTGCTCCGAAAATGCTGTAAAATCTGCCTCTACATTAGCTTGCCGAGAACGGcaatgtttacatttaggctaTCTTGTTTTTCAAACTTG

Function

symbol description
rasd1 Predicted to enable GTP binding activity and GTPase activity. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Orthologous to several human genes including RASD1 (ras related dexamethasone induced 1).

NR:

description
dexamethasone-induced Ras-related protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825358.1 True 1174 mRNA 0.47 2 14054552 14055843

Neighbor

gene id symbol gene type direction distance location
LOC120574849 rasd1,LOC101484812,LOC104918344,LOC106942351,LOC103468867,LOC103373502,LOC103140985,LOC103393006 coding upstream 5115 14048086 ~ 14049437 (+)
LOC120575215 sox8 coding upstream 53876 13996902 ~ 14000676 (+)
LOC120575449 adap1,LOC103363436,LOC106518683,LOC108241370 coding upstream 170226 13867284 ~ 13884326 (+)
LOC120575450 rnps1,LOC104933647,LOC103363435 coding upstream 187996 13863511 ~ 13866556 (+)
LOC120575448 NA coding upstream 207644 13840149 ~ 13846908 (+)
LOC120574464 LOC104918338,LOC103373486,LOC103393004,LOC106518679,LOC108241369,LOC103140983 coding downstream 10943 14066786 ~ 14096876 (+)
LOC120575371 LOC104945238 coding downstream 372274 14428117 ~ 14429657 (+)
syngr2a LOC103373322 coding downstream 489811 14545654 ~ 14549374 (+)
cant1a NA coding downstream 497326 14553169 ~ 14558801 (+)
LOC120574730 NA coding downstream 502986 14558829 ~ 14562753 (+)
LOC120575454 NA non-coding upstream 99829 13946606 ~ 13954723 (+)
G154682 NA non-coding upstream 461918 13589517 ~ 13592634 (+)
G154661 LOC106942609 non-coding upstream 560691 13492585 ~ 13493861 (+)
G154639 NA non-coding upstream 569834 13484039 ~ 13484718 (+)
G154634 crebbp,LOC108247643,LOC106518707 non-coding upstream 579104 13474159 ~ 13475448 (+)
LOC120575155 NA non-coding downstream 51938 14107781 ~ 14241105 (+)
G154811 NA non-coding downstream 229331 14285174 ~ 14287984 (+)
G154824 NA non-coding downstream 270439 14326282 ~ 14326489 (+)
G154872 LOC104945235 non-coding downstream 381633 14437476 ~ 14439147 (+)
G154875 NA non-coding downstream 387249 14443092 ~ 14444138 (+)
G154743 LOC102293104 other upstream 200266 13847139 ~ 13854286 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other upstream 272867 13769019 ~ 13781685 (+)
trnat-agu_6 NA other upstream 284776 13769703 ~ 13769776 (+)
vasnb vasn other upstream 362249 13656015 ~ 13692303 (+)
LOC120574968 LOC102294452 other upstream 1028136 13016959 ~ 13026416 (+)
si:dkey-282h22.5 NA other downstream 925393 14981236 ~ 14984745 (+)
LOC120574428 NA other downstream 929857 14985700 ~ 14986913 (+)
LOC120575440 LOC102304323 other downstream 936170 14992013 ~ 14992508 (+)
G155088 NA other downstream 1079948 15135791 ~ 15139706 (+)
ndel1b ndel1,LOC104940291 other downstream 1311077 15366920 ~ 15404605 (+)

Expression


Co-expression Network