LOC120574999


Basic Information

Item Value
gene id LOC120574999
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 16918946 ~ 16919786 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825559.1
GTCAACAATAGTCAAGGAAAGACAAGATGACTACACTCACTGCTAAGGACAAGGACGCAGTCAGAACCTTCTGGGCTAAAGTGTCTGGAAAGGAGGAGGACATCGGCACCGATGCTGTGGCTAGGATGCTGGCGGTATACCCGCAGACTAAGACTTACTTCAGCCACTGGAAGGACCTGAGCCCCAGCTCTCCCTCTGCGAGGAAGCATGGAATAACTGTGATGAAAGGAGTTGCAGATGCTGTGTCAAAAATCGACGACCTGAAAGGAGGTCTTCTGGCCCTCAGTGAGCTGCATGCCTTCACTCTGCGTGTGGACCCTGCCAACTTCAAGATTATCTCTCACTGCCTCCTTGTGGTCCTGTCCATCAAGTTCCCCAACGACTTCACCCCTGAGGTCCATGTCGCTCTGGACAAGTTCCTGGCTGCTCTGGCTCTGGCCCTGGCTGAGAAATACCGATAAACAGCAGGAGAAGATGAAGGAGACTGCAGCATGAGCTTACATTGCATAATGATTAATAAATGCATTCATGCAAAAAAGCAAAGCAATTGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825559.1 True 553 mRNA 0.50 3 16918946 16919786

Neighbor

gene id symbol gene type direction distance location
kank2 kank2,LOC104918682 coding upstream 4096 16898592 ~ 16914850 (+)
LOC120575379 LOC103358228,LOC100691522,LOC102311213,LOC102781582 coding upstream 24814 16865136 ~ 16894132 (+)
prkcsh prkcsh coding upstream 80251 16829957 ~ 16838695 (+)
pde4a pde4a,LOC100691791,LOC102779192,LOC102193735,LOC108243727,LOC107083082,LOC106958375 coding upstream 89464 16780385 ~ 16829482 (+)
tyk2 tyk2 coding upstream 162903 16744205 ~ 16756043 (+)
LOC120575002 NA coding downstream 3375 16923161 ~ 16924128 (+)
LOC120575003 NA coding downstream 7328 16927114 ~ 16928076 (+)
LOC120574106 hbz,LOC103143760,LOC106958385,LOC108440248,LOC107378371,LOC103468712 coding downstream 16130 16935916 ~ 16936837 (+)
nprl3 nprl3 coding downstream 24817 16944603 ~ 16961165 (+)
rhbdf1a rhbdf1 coding downstream 54292 16974078 ~ 17003265 (+)
G155677 NA non-coding upstream 78652 16838923 ~ 16840294 (+)
G155616 NA non-coding upstream 196283 16718176 ~ 16722663 (+)
G155602 NA non-coding upstream 265433 16652933 ~ 16653513 (+)
G155413 NA non-coding upstream 603972 16314766 ~ 16314974 (+)
G155393 NA non-coding upstream 677864 16216514 ~ 16241082 (+)
G155688 LOC100174873 non-coding downstream 5277 16925063 ~ 16932234 (+)
G155684 LOC100174873,LOC107596828,LOC107703325 non-coding downstream 9585 16929371 ~ 16940255 (+)
G155743 NA non-coding downstream 92632 17012418 ~ 17016352 (+)
G155788 NA non-coding downstream 197833 17117619 ~ 17118031 (+)
G155807 unkl,LOC106934033 non-coding downstream 241396 17161182 ~ 17162203 (+)
raver1 NA other upstream 149705 16757645 ~ 16769241 (+)
cmc4 NA other upstream 184602 16733456 ~ 16734344 (+)
olfm2a olfm2,LOC104918560,LOC107378344,LOC100706999 other upstream 354949 16520982 ~ 16563997 (+)
col5a3a col5a3,LOC104952480,LOC102201017,LOC101485068,LOC102299321,LOC100695815,LOC107378343,LOC108243746 other upstream 417242 16451233 ~ 16501704 (+)
camsap3 NA other upstream 531424 16315832 ~ 16387522 (+)
usp31 usp31,LOC103368689,LOC101484509,LOC102212874 other downstream 352873 17272659 ~ 17292266 (+)
hs3st4 hs3st4,LOC100711185 other downstream 494789 17414575 ~ 17503644 (+)
rmi2 rmi2,LOC102793083 other downstream 796953 17716739 ~ 17724229 (+)
pla2g10 LOC104918718,LOC100698203,LOC102215607,LOC101486881,LOC102793376,LOC102313624,LOC103360505,LOC105922122 other downstream 817193 17736979 ~ 17741144 (+)
axin1 axin1,LOC104966034,LOC107564695 other downstream 831091 17750877 ~ 17791408 (+)

Expression


Co-expression Network