LOC120575015 (LOC103393018,LOC102303741,LOC101486233,LOC102226583,LOC106518738,LOC108437157,LOC108239256)


Basic Information

Item Value
gene id LOC120575015
gene name LOC103393018,LOC102303741,LOC101486233,LOC102226583,LOC106518738,LOC108437157,LOC108239256
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12694885 ~ 12727024 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825576.1
AGAGGGGAAAACAATTACTACACACCTACCAGCCACGATTGCAAGAGTACACGAGCTGGAAACAAGCTGCTAAAAGCTCTTACAACAGGCAGCTACAGTACTGACACTTACGGTACTGACCATCATAAGGACACAGACACCTCTGCTGATGGCATGTCAGTCATCATGGCAACTGGAGAGAGGAAAAGGCGATGTGTACCTGAGGACCTGTCTTTGGAGGAAAGAGATGAGCTGTCGAACATACGACGCAGGAAAAAAGAGCTTCTGGATGATATTGAACGGCTGAAGTTTGAGATTGCAGAGGTAATGACTGAGATTGAGCAGCTAACCTGTGTAGGGGAgagcaaaaccacacaaagaaacaaacagatCGCCATGGGGAGGAAGAAATTCAACATGGACCCTAAAAAGgggaTCCAGTTTCTTCTTGAGAACGATCTTCTCCAGAACACCCCAGAGGATATCGCACAGTTCCTCTACAAAGGCGAGGGGCTCAACAAAACAGTCATCGGGGACTACTTAGGGGAACGGGATGACTTTAACATCAAGGTCCTCCAGGCGTTTGTGGAGCTTCATGAGTTTGCAGACCTCAACCTCGTACAAGCCTTAAGGCAGTTTCTATGGAGCTTCAGACTTCCTGGCGAAGCCCAGAAGATTGATCGTATGATGGAGGCGTTTGCCTCCAGGTACTGCCAATGCAATCCCGGTGTTTTCCAGTCCAcagACACCTGCTATGTCCTATCATTTGCCATCATTATGCTGAACACAAGCCTGCACAATCCCAACGTCAGAGACAAGCCCCCCGTGGAGCGCTTTATCTCCATGAACAGAGGGATCAATGAGGGGGGAGACCTCCCAGAGGAGCTACTCAGGAATCTATATGACAGCATCAAGAGCGAACCCTTTAAGATCCCAGAGGATGATGGGAATGACCTGACGCACACGTTCTTCAACCCAGACAGAGAGGGCTGGCTGCTTAAATTAGGGGGCCGAGTGAAAACCTGGAAGAGAAGGTGGTTCATCCTGACTGACAACTGCCTCTACTACTTTGAATACACAACAGACAAGGAGCCTCGTGGGATCATCCCGCTGGAGAATCTAAGCATCAGGGAGGTGGAGGAGCCCAGGAAACCTAACTGTTTTGAGCTCTATAACCCCAATCACAAGGGCCAGGTGATCAAAGCCTGCAAGACGGAGGCAGACGGGCGAGTTGTTGAGGGTAACCACGTTGTGTACAGGATATCAGCGCCCACGccggaagagaaagaggaatgGATTAAATCCATCAAGGCCAGCATTAGCAGAGACCCCTTCTACGACATGCTGGCCACCAGGAAGAGACGCATCGCCAACAAGAAGTGAAGAGGGACAATCTTCTCAACCTCCAGctcctccatctttctctccttcgGTTCATGAACACATAAACCACACACACTGCGAAGCTGGTACACCACAGAAAAGTCCTTCAACCCCAGAAAAAACTTTTCCCCTGGACTGTCTACAAGTCATGTGCACTTGCTGGGGCTGATACATCACACACTACTGAGGGGACAGCAGACCTCCAGCTAACAGATATGTGGACTCTTGCATTGAGCAGCAAATAAACAACCAAGTCAGCTTGTTTCTCATCCATCTCATGCACACCCCCATACCTCCCCCTCTCATGGTCATAACATGTTTCTAGGTCTCCCTAATGCACAACTGTCATGTTTCAgatgcacatgcatgcatgtgggTTATTATAGACCAATcaatatgtttgtgtttgtttgtgtgtgcatgtttgtgtatgcgtgcgtgcgtgtgtatgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtatgcagcAGTGTGCATGCTATCAATGCACCCAGgatctacagtatgtgtgcgtACAAGCGTTCCCTCCACCGTGCTTTATGAAAGGTCATTGTAATTCAAAGTAGAGTTTAGATGTATTGTCGACTACATGGGGAACGATATGTGAGTGAATTAAGCCATTTGGAGGATGAAAGGTGGGAAGAGGAGACagatggaaacatttgggagGTTGTGGGTAGGTCAGTGCAGCATAACCTCACGTGGACCATGTGGTCTTCTCATTCTGGTGCTGATTCTTCTCTGCAGGTGCCATGGCTGAAGCTTTGCTCAGAGTAACCTCAGAAAACAGCGCTGGCTTACATTTAGGTTCCTAACAAAGCATTACAGTCTTGAGTCAGCTGGGctgatttcatttatttgtgtgGAGCAGAGAATTTTGAAATGTgcatacttttttattttagttgacTTGGAAAGGAGTTTTTGCCGAAGCTTGAAATAAAAACTTTCTTTTTGGACGTAAAGTTGCAATCCTTAAGATTTCAGTCCTGGTTAATTTGGCAACACAACCATGATTAACGGTGGTAACTGCAAGTGTGCTGTTTAATACTAAAGCAAGCACTCCTTAAGCagccactttgtaaaaaatgcAACAGAACAGCAACTTTTGTATCATTTTACAGTGCAACCAAACAAAATGAAGTTAGTCAATAATAATTGCTAATGTAATGTTTAACTGTGTTAACAGTTCACAGTGGCTGCTCCTTGTTTCGTTACTCtcttctaaaaataaaaaatgatccGCTGATgaaaaaaatgcccaaaatcCACAGAAAAGTGTCAATTTTATGAAAACCTTAAGgattttaactttaaaaaattgTCTGCTGGGTAGGTTTTATTTATGGCTGTGCAATGGCCCAATAGGGTACCAGTCCGATtaagctttttttcttctcttgtcTATGGCCTAGGTCAGTGAAGGTTGATGTATTGTTGTGATCCTGTTTGCGTTTTGTTTGTAATCCTAAACAATCTTGCTTGCTTTTGTGTTCTTCTCTgaaagtatataagtataacCAACCAActtatcatttttgtatttattttcatttgtgaAATGGTTTAATACTACCTGTAAATGTTATACAATGTATGCTTaagttatgtatgtatatataatgtataggTTTTCTGGTCTCTTTGTTGTAGTATGCACACTCTGTGTAACATGCTTGAGCCTACAGGCAGATGTTTGCATCAGCTGAAGTTTGGGGTCTTCTTTACAAAAGCCTTAAACATAATCATAAGTAAACATATGAGGGTGAGgaggaagatgatgatgatgatgatgatgatattggtCAATAACTGTGCCGATGCTCTTTAAATAAGCCATGACAAGTGAGAAAGATGGTTGTattaatgatgatgataaagaTTATAGTGAAAATGATGTTTGTTGTTAATGATGATGATTATAGTGATGTAATAtcagtgtgatgatgatgatgatgatactaTCATTAATGATGATGTCAACAACTATAAACAGCAGTAGTTTTCTATGtgattgtaaaataaaatgaaagcctTGTGGTCAAGGCAGAATATTATCTTCTACTGCCCTGTGTGGGCTTATAATTACATTAACTTTTTTATTCTCTGTAAAAGCGGTCACGTTGTACATTACGTGTATCTATATAAAGTATACATAAAGCATA
>XM_039825577.1
TGCCAACTACTCTCCCGATACTAGTGGAGTGAAAGCGTATTGGGAGGGATAACGAATACACGCTCGACCACTGTGGGCAAAAAGACACCGCTGCTGCCGCCGCCGCTGCCGCCGCTGCTGCTACAGATACACACCGCTCACTGACTGACGGGACCGGAGGGACTGCCTCGCGACAGTGAGGCGTAAATGGCCATTACATTTCCTAAAAGAAATACGCTGCTCGTGAGACAACCTGTGTACCAAAAGCGTCCTGGAAATTAGGACGCTTATTTGCTGTATATTAGAGCCCCTTTTCGCACAACGGAAGTTTCTGCAACCGATTTTGGGGGGGGATCTTTGATTTATAGACTGGAAACATGGACGAGGACAACCAAGTACCTGAGGACCTGTCTTTGGAGGAAAGAGATGAGCTGTCGAACATACGACGCAGGAAAAAAGAGCTTCTGGATGATATTGAACGGCTGAAGTTTGAGATTGCAGAGGTAATGACTGAGATTGAGCAGCTAACCTGTGTAGGGGAgagcaaaaccacacaaagaaacaaacagatCGCCATGGGGAGGAAGAAATTCAACATGGACCCTAAAAAGgggaTCCAGTTTCTTCTTGAGAACGATCTTCTCCAGAACACCCCAGAGGATATCGCACAGTTCCTCTACAAAGGCGAGGGGCTCAACAAAACAGTCATCGGGGACTACTTAGGGGAACGGGATGACTTTAACATCAAGGTCCTCCAGGCGTTTGTGGAGCTTCATGAGTTTGCAGACCTCAACCTCGTACAAGCCTTAAGGCAGTTTCTATGGAGCTTCAGACTTCCTGGCGAAGCCCAGAAGATTGATCGTATGATGGAGGCGTTTGCCTCCAGGTACTGCCAATGCAATCCCGGTGTTTTCCAGTCCAcagACACCTGCTATGTCCTATCATTTGCCATCATTATGCTGAACACAAGCCTGCACAATCCCAACGTCAGAGACAAGCCCCCCGTGGAGCGCTTTATCTCCATGAACAGAGGGATCAATGAGGGGGGAGACCTCCCAGAGGAGCTACTCAGGAATCTATATGACAGCATCAAGAGCGAACCCTTTAAGATCCCAGAGGATGATGGGAATGACCTGACGCACACGTTCTTCAACCCAGACAGAGAGGGCTGGCTGCTTAAATTAGGGGGCCGAGTGAAAACCTGGAAGAGAAGGTGGTTCATCCTGACTGACAACTGCCTCTACTACTTTGAATACACAACAGACAAGGAGCCTCGTGGGATCATCCCGCTGGAGAATCTAAGCATCAGGGAGGTGGAGGAGCCCAGGAAACCTAACTGTTTTGAGCTCTATAACCCCAATCACAAGGGCCAGGTGATCAAAGCCTGCAAGACGGAGGCAGACGGGCGAGTTGTTGAGGGTAACCACGTTGTGTACAGGATATCAGCGCCCACGccggaagagaaagaggaatgGATTAAATCCATCAAGGCCAGCATTAGCAGAGACCCCTTCTACGACATGCTGGCCACCAGGAAGAGACGCATCGCCAACAAGAAGTGAAGAGGGACAATCTTCTCAACCTCCAGctcctccatctttctctccttcgGTTCATGAACACATAAACCACACACACTGCGAAGCTGGTACACCACAGAAAAGTCCTTCAACCCCAGAAAAAACTTTTCCCCTGGACTGTCTACAAGTCATGTGCACTTGCTGGGGCTGATACATCACACACTACTGAGGGGACAGCAGACCTCCAGCTAACAGATATGTGGACTCTTGCATTGAGCAGCAAATAAACAACCAAGTCAGCTTGTTTCTCATCCATCTCATGCACACCCCCATACCTCCCCCTCTCATGGTCATAACATGTTTCTAGGTCTCCCTAATGCACAACTGTCATGTTTCAgatgcacatgcatgcatgtgggTTATTATAGACCAATcaatatgtttgtgtttgtttgtgtgtgcatgtttgtgtatgcgtgcgtgcgtgtgtatgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtatgcagcAGTGTGCATGCTATCAATGCACCCAGgatctacagtatgtgtgcgtACAAGCGTTCCCTCCACCGTGCTTTATGAAAGGTCATTGTAATTCAAAGTAGAGTTTAGATGTATTGTCGACTACATGGGGAACGATATGTGAGTGAATTAAGCCATTTGGAGGATGAAAGGTGGGAAGAGGAGACagatggaaacatttgggagGTTGTGGGTAGGTCAGTGCAGCATAACCTCACGTGGACCATGTGGTCTTCTCATTCTGGTGCTGATTCTTCTCTGCAGGTGCCATGGCTGAAGCTTTGCTCAGAGTAACCTCAGAAAACAGCGCTGGCTTACATTTAGGTTCCTAACAAAGCATTACAGTCTTGAGTCAGCTGGGctgatttcatttatttgtgtgGAGCAGAGAATTTTGAAATGTgcatacttttttattttagttgacTTGGAAAGGAGTTTTTGCCGAAGCTTGAAATAAAAACTTTCTTTTTGGACGTAAAGTTGCAATCCTTAAGATTTCAGTCCTGGTTAATTTGGCAACACAACCATGATTAACGGTGGTAACTGCAAGTGTGCTGTTTAATACTAAAGCAAGCACTCCTTAAGCagccactttgtaaaaaatgcAACAGAACAGCAACTTTTGTATCATTTTACAGTGCAACCAAACAAAATGAAGTTAGTCAATAATAATTGCTAATGTAATGTTTAACTGTGTTAACAGTTCACAGTGGCTGCTCCTTGTTTCGTTACTCtcttctaaaaataaaaaatgatccGCTGATgaaaaaaatgcccaaaatcCACAGAAAAGTGTCAATTTTATGAAAACCTTAAGgattttaactttaaaaaattgTCTGCTGGGTAGGTTTTATTTATGGCTGTGCAATGGCCCAATAGGGTACCAGTCCGATtaagctttttttcttctcttgtcTATGGCCTAGGTCAGTGAAGGTTGATGTATTGTTGTGATCCTGTTTGCGTTTTGTTTGTAATCCTAAACAATCTTGCTTGCTTTTGTGTTCTTCTCTgaaagtatataagtataacCAACCAActtatcatttttgtatttattttcatttgtgaAATGGTTTAATACTACCTGTAAATGTTATACAATGTATGCTTaagttatgtatgtatatataatgtataggTTTTCTGGTCTCTTTGTTGTAGTATGCACACTCTGTGTAACATGCTTGAGCCTACAGGCAGATGTTTGCATCAGCTGAAGTTTGGGGTCTTCTTTACAAAAGCCTTAAACATAATCATAAGTAAACATATGAGGGTGAGgaggaagatgatgatgatgatgatgatgatattggtCAATAACTGTGCCGATGCTCTTTAAATAAGCCATGACAAGTGAGAAAGATGGTTGTattaatgatgatgataaagaTTATAGTGAAAATGATGTTTGTTGTTAATGATGATGATTATAGTGATGTAATAtcagtgtgatgatgatgatgatgatactaTCATTAATGATGATGTCAACAACTATAAACAGCAGTAGTTTTCTATGtgattgtaaaataaaatgaaagcctTGTGGTCAAGGCAGAATATTATCTTCTACTGCCCTGTGTGGGCTTATAATTACATTAACTTTTTTATTCTCTGTAAAAGCGGTCACGTTGTACATTACGTGTATCTATATAAAGTATACATAAAGCATA

Function

NR:

description
cytohesin-3

GO:

id name namespace
GO:0043087 regulation of GTPase activity biological_process
GO:0032012 regulation of ARF protein signal transduction biological_process

KEGG:

id description
K18441 CYTH; cytohesin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825576.1 False 3558 mRNA 0.43 13 12694885 12714698
XM_039825577.1 True 3737 mRNA 0.43 13 12694885 12727024

Neighbor

gene id symbol gene type direction distance location
axin2 LOC103361462 coding downstream 267379 12413431 ~ 12427506 (-)
tex2 LOC103361461 coding downstream 337793 12342804 ~ 12357092 (-)
LOC120574755 ern1 coding downstream 353602 12320594 ~ 12341283 (-)
samd9l LOC102078066,LOC102793943,LOC102205815,LOC102308574,LOC101466743 coding downstream 374621 12309749 ~ 12320264 (-)
gaa gaa coding downstream 387719 12298317 ~ 12307166 (-)
LOC120574004 stk19 coding upstream 19793 12746817 ~ 12749160 (-)
LOC120574003 LOC104947694,LOC103373535,LOC108239260,LOC101158446,LOC103141614 coding upstream 26446 12753470 ~ 12760056 (-)
trnal-uag_2 NA coding upstream 115869 12842893 ~ 12842974 (-)
cdr2a LOC104947687 coding upstream 117372 12844396 ~ 12853731 (-)
si:ch211-139g16.8 NA coding upstream 134328 12861352 ~ 12863585 (-)
LOC120574720 NA non-coding downstream 15775 12677493 ~ 12679110 (-)
LOC120574718 NA non-coding downstream 126189 12568219 ~ 12568696 (-)
LOC120574719 NA non-coding downstream 127075 12567178 ~ 12567810 (-)
G154368 NA non-coding downstream 293410 12400252 ~ 12401475 (-)
LOC120574757 NA non-coding downstream 320891 12361239 ~ 12373994 (-)
G154437 LOC104947690 non-coding upstream 39674 12766698 ~ 12768603 (-)
G154438 NA non-coding upstream 42385 12769409 ~ 12770122 (-)
G154446 LOC104918798,LOC100695608,LOC101483500,LOC105930091 non-coding upstream 51991 12779015 ~ 12781445 (-)
G154515 NA non-coding upstream 144534 12871558 ~ 12953388 (-)
G154517 NA non-coding upstream 147336 12874360 ~ 12931319 (-)
cep112 NA other downstream 129414 12427504 ~ 12565471 (-)
LOC120574419 NA other downstream 603904 12085985 ~ 12090981 (-)
G154033 NA other downstream 1469339 11203450 ~ 11225546 (-)
tnrc6c1 LOC103361861 other downstream 1557357 11098316 ~ 11137528 (-)
LOC120574486 NA other downstream 1614278 11078545 ~ 11080607 (-)
LOC120575506 LOC100697827 other upstream 8420 12735444 ~ 12737483 (-)
iqck NA other upstream 227950 12954974 ~ 12972829 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other upstream 246236 12973260 ~ 13012781 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other upstream 608425 13335449 ~ 13421951 (-)
tfap4 tfap4 other upstream 862459 13589483 ~ 13631836 (-)

Expression


Co-expression Network