LOC120575115 (haghl,LOC100699516,LOC104918824,LOC101076411)


Basic Information

Item Value
gene id LOC120575115
gene name haghl,LOC100699516,LOC104918824,LOC101076411
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12133972 ~ 12137255 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825746.1
ATGTCTCGATGATGTCGCGAGAACTTCACAATCTGAATCGTCTGAATTCAGAGATGTAGAATAATAACTTTCAGACCATAACAGTCGGACAAGGATACAACAACCTCTAATCGATATCAGATAGACTGAGTGTTGCGCACTGTGGTGCGCATGCGTTTAACGGTGCCATGAAGGTAAAGGTGATCTCCATACTGGAGGACAACTACATGTACCTGGTGATTGACGAGCAGAGTAAACGGGCCGTAGCTGTGGACCCTGCTGTACCACACCGGCTGCTAGAAATAGTGAAGAGAGAGGGCTTGTCTCTGACAGCTGTCCTCACCACACACCATCACTGGGACCATGCTCGGGGGAATGAGGCTCTGTTGAAGGAGGTTCCTGGGCTGAGGGTGTATGGGGGAGACGATCGGATCGGGGGTCTGACGGATAAAGTAACTGACGCCCAGGAACTCAAGTTTAACTCCATCAATGTGAGGTGCCTATTCACTCCCTGCCATACCTCTGGGCACATGTGCTACTTTGTTTGGGAGGATGAGTGCACTGACGCCCCTGCTGTGTTCACAGGGGATACATTGTTTATCAGTGGATGCGGGCGGTTTCTTGAGGGCACAGCAGAACAGATGTACCACAATCTCACCCAGGTGCTGGGCTCCCTACCTCAAGACACGAAGGTGTTCTGTGGACACGAGTACACCATTAAGAACCTGAAATTTGCCATGCTGGTGGAGCCAGAGAATGAAAAGGTTAAAGAGATGCTGAGCTGGGCCAGGGCgagagatgatgatgacaaACCCACAGTGCCTTCTACCCTAATGGAGGAGTTTGAGTACAACCCTTTTCTTCGCCTCTCAAAGGAAGGAGTACAAAAGTTCACTGGAAAGACAGACCCCATAGAGGTGCTGAGGGTCCTGCGGAAGGAGAGGGACACATTTAAGAAGCCCAAGCAGAGGCTTCCTCCCCATGCCATGTTGGCTTTGGAGTGGGGGCTTCTCAGACCCTGAGATCCAGTTTCAGAGATCTGAACATACTCAACTATCAAGGAGAGATAGTTTGAATGACTGAATGCAGCAAGACACAACTCTGTAGAGTGTTATGTGTTGCTCTAACCCTCAATGTAACCAATGTATACTACTGGGAACCTGGTTGAccataatgtgtgtgttgtttaagtAATAATGAAACAATGACTGCACAAAGAAGGCAGTGTAAAGCTGCTTTCATTAAATATTCCTACAAGCTAAA
>XM_039825747.1
TGATGTCTCGATGATGTCGCGAGAACTTCACAATCTGAATCGTCTGAATTCAGAGATGTAGAATAATAACTTTCAGACCATAACAGTCGGACAAGGATACAACAACCTCTAATCGATATCAGATAGACTGAGTGTTGCGCACTGTGGTGCGCATGCGTTTAACGGTGCCATGAAGGTAAAGGTGATCTCCATACTGGAGGACAACTACATGTACCTGGTGATTGACGAGCAGAGTAAACGGGCCGTAGCTGTGGACCCTGCTGTACCACACCGGCTGCTAGAAATAGTGAAGAGAGAGGGCTTGTCTCTGACAGCTGTCCTCACCACACACCATCACTGGGACCATGCTCGGGGGAATGAGGCTCTGTTGAAGGAGGTTCCTGGGCTGAGGGTGTATGGGGGAGACGATCGGATCGGGGGTCTGACGGATAAAGTAACTGACGCCCAGGAACTCAAGTTTAACTCCATCAATGTGAGGTGCCTATTCACTCCCTGCCATACCTCTGGGCACATGTGCTACTTTGTTTGGGAGGATGAGTGCACTGACGCCCCTGCTGTGTTCACAGGGGATACATTGTTTATCAGTGGATGCGGGCGGTTTCTTGAGGGCACAGCAGAACAGATGTACCACAATCTCACCCAGGTGCTGGGCTCCCTACCTCAAGACACGGCgagagatgatgatgacaaACCCACAGTGCCTTCTACCCTAATGGAGGAGTTTGAGTACAACCCTTTTCTTCGCCTCTCAAAGGAAGGAGTACAAAAGTTCACTGGAAAGACAGACCCCATAGAGGTGCTGAGGGTCCTGCGGAAGGAGAGGGACACATTTAAGAAGCCCAAGCAGAGGCTTCCTCCCCATGCCATGTTGGCTTTGGAGTGGGGGCTTCTCAGACCCTGAGATCCAGTTTCAGAGATCTGAACATACTCAACTATCAAGGAGAGATAGTTTGAATGACTGAATGCAGCAAGACACAACTCTGTAGAGTGTTATGTGTTGCTCTAACCCTCAATGTAACCAATGTATACTACTGGGAACCTGGTTGAccataatgtgtgtgttgtttaagtAATAATGAAACAATGACTGCACAAAGAAGGCAGTGTAAAGCTGCTTTCATTAAATATTCCTACAAGCTAAA

Function

symbol description
haghl Predicted to enable hydroxyacylglutathione hydrolase activity and metal ion binding activity. Predicted to be involved in methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione.

NR:

description
PREDICTED: hydroxyacylglutathione hydrolase-like protein

GO:

id name namespace
GO:0006750 glutathione biosynthetic process biological_process
GO:0008270 zinc ion binding molecular_function
GO:0004416 hydroxyacylglutathione hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825746.1 True 1242 mRNA 0.48 9 12133974 12137255
XM_039825747.1 False 1142 mRNA 0.48 8 12133972 12137255

Neighbor

gene id symbol gene type direction distance location
LOC120575138 hagh,LOC100699784,LOC107092812 coding upstream 517 12128791 ~ 12133455 (+)
LOC120573928 hs3st6 coding upstream 13146 12107860 ~ 12120826 (+)
LOC120573979 rpl3l,LOC102799413 coding upstream 70911 12058647 ~ 12063061 (+)
rps2 rps2,LOC104918830 coding upstream 78790 12052727 ~ 12055182 (+)
rnf151 rnf151,LOC102775723,LOC100708193 coding upstream 81740 12049325 ~ 12052232 (+)
e4f1 e4f1 coding downstream 6205 12143460 ~ 12150996 (+)
grid2ipa LOC103361735,LOC102310441,LOC102202691,LOC102796762 coding downstream 14041 12151296 ~ 12177758 (+)
slc5a11 slc5a11,LOC102796461 coding downstream 41034 12178289 ~ 12185788 (+)
si:ch73-374l24.1 LOC101487097,LOC103361464,LOC102304961,LOC106957043,LOC103141622 coding downstream 429105 12566360 ~ 12684418 (+)
cacng5b LOC104918808,LOC100698262,LOC103361465,LOC103141620 coding downstream 548333 12685588 ~ 12693357 (+)
G154227 NA non-coding upstream 65220 12067737 ~ 12068752 (+)
G154226 NA non-coding upstream 68464 12065280 ~ 12065508 (+)
G154225 LOC105933046,LOC101076874,LOC102218385,LOC106948144,LOC103469244,LOC103141651 non-coding upstream 69700 12063970 ~ 12064272 (+)
G154215 NA non-coding upstream 113464 12020278 ~ 12020508 (+)
G154204 NA non-coding upstream 158260 11975019 ~ 11975712 (+)
G154297 NA non-coding downstream 50368 12187623 ~ 12190042 (+)
G154307 NA non-coding downstream 79621 12216876 ~ 12218005 (+)
LOC120574756 NA non-coding downstream 204145 12341400 ~ 12342350 (+)
G154367 NA non-coding downstream 264475 12401730 ~ 12401983 (+)
G154379 NA non-coding downstream 338512 12475767 ~ 12523672 (+)
G154254 NA other upstream 18780 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other upstream 40414 12089373 ~ 12093558 (+)
LOC120574068 NA other upstream 908723 11207041 ~ 11225249 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other upstream 1060146 11063859 ~ 11073826 (+)
G153808 spag9 other upstream 1381074 10752160 ~ 10752898 (+)
G154461 NA other downstream 706168 12843423 ~ 12846597 (+)
LOC120574968 LOC102294452 other downstream 879704 13016959 ~ 13026416 (+)
vasnb vasn other downstream 1518760 13656015 ~ 13692303 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other downstream 1631764 13769019 ~ 13781685 (+)
trnat-agu_6 NA other downstream 1632448 13769703 ~ 13769776 (+)

Expression


Co-expression Network