LOC120575138 (hagh,LOC100699784,LOC107092812)


Basic Information

Item Value
gene id LOC120575138
gene name hagh,LOC100699784,LOC107092812
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12128791 ~ 12133455 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825779.1
GGTTAAAGTTGAAAAGGGACGGACGCGGAACTAAACCGAGCTAAACTTTTCTGGTTTACGTGAATGCGATAACGCTTTATCGGCTGTTGCTATGTTATTGAAGTCACTAGTAGGGGGTGCCTGCACTCTGCTTGGAGCTGCAACAGCCTTCAGATTTGCACCTGTGGAAGTCCAGGCCCAAGCAGCTGCCCTCCTTCACAGCGCAGTGAGGAAATCCTCTCTGGTAGAACAAGCAAATATGAGGATTGAACTTCTCCCTGCACTCAGTGACAACTACATGTACCTCCTGATTGATGTGGACTCCAGAGAAGCAGCTATTGTTGACCCTGTGGAGCCAATAAAGGTTGTGGAAGCTGTCAGAAAACATGGTGTAAAACTCACAACAATTCTGACCACTCATCACCACTGGGATCATGCTAGTGGAAATGAGAAGATGATAAAGTTAATGCCAGGACTGAGGGTCTATGGAGGAGATGACAGAATTGATGCTATTACAAAGAAAGTTTCTCATTCCAACAATCTCAAAGTTGGATCGCTCAATGTCAAATGCCTGTACACACCATGTCACACAACTGGTCACATCTGCTACTATGtgacaaaagaaaacagcaCCGAGCCACCAGCAGTTTTCACAGGCGACACGCTGTTTATGGCTGGTTGTGGTAAATTCTTCGAGGGTACAGCAGAGCAGATGTACAAAGCCTTGATAGAAATTCTGGGAAGCCTGCCTCCTGAAACGcATGTTTACTGCGGTCACGAGTACACCGTCAGCAATCTGAAATTTGCCCGTTCTGTGGAACCAGACAATGAAGTCATTCAGAAGAAGCTAGCTTGGGCAAAGGAGAAATGCAGCAATGGAGAACCTACCATCCCGTCCACTTTGGCAGAGGAATTCACATTTAACCCCTTTATGAGAGTAAAAGAGAAGTCAGTGCAAGACCATGTAAAGCAGACAAACCCGGTTGAAACCATGAGAAGTCTCCGGAAAGAAAAAGATAGCTTCCGGGTGCCCAAGGAGTGATGGCCAGTGCACTCATGCTGACTGTTTCTTAACTGCTTCCAACACTGCAGCTTGTCAATAATCGAGTACTACAGAAATCTATATAATATCTGCACTTCAATTTTAAAGCGAATTCAGGTAGATGTACTACATTTACTCTCAGTCAAGGCACACATTTTATATCCCTATATTCAGCCCTGATATGGCTATAAATGTCATGTAGTTGTATTTGGTTTGTTTGGAGGATATTGGTGTGATAGTTGTAAGTAATATATGGCCATTAATTGAATGATTTAAaatcaatgaaaaataaatttgttcatctgtaaatctgagtttaagAGTATATTTAGTATTATGTTGTAATATATTCATGTAAAAAACCTCAACttcataaaatgttaaaattgaaaGATTTTTAACAAGACAGGGAACTGCTTGAGgaacaaatgttgaaatatgtaacatttctgtaaattgaTGAATAATTTCTTTGTAAAGATTCAAATCAATGCTTTAGGAGtgcatttattttcatatttctttGGAAGCTGTTGGTTTGATGTAAAATTCGGCACAAATGCTttttatttcttcctttttatttaaaaggattTTGTGAGCAAAGCATTGTCTACTTATTGGCTTGTCAGCATTAAATGTTAGATACCGTGAATGCTCTTTTGCATGTAAAGTACAATCTTACAAAGAATATTGCATTGTGTTCTTTGgaaaaagcaataaaacacatttattcaAGTCAGTGGAA

Function

symbol description
hagh Predicted to enable hydroxyacylglutathione hydrolase activity and metal ion binding activity. Predicted to act upstream of or within methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione. Predicted to be located in mitochondrial matrix. Is expressed in gut; intestinal bulb; and liver. Orthologous to human HAGH (hydroxyacylglutathione hydrolase).

NR:

description
hydroxyacylglutathione hydrolase, mitochondrial isoform X1

GO:

id name namespace
GO:0006750 glutathione biosynthetic process biological_process
GO:0008270 zinc ion binding molecular_function
GO:0004416 hydroxyacylglutathione hydrolase activity molecular_function

KEGG:

id description
K01069 gloB, gloC, HAGH; hydroxyacylglutathione hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825779.1 True 1769 mRNA 0.40 9 12128791 12133455

Neighbor

gene id symbol gene type direction distance location
LOC120573928 hs3st6 coding upstream 7965 12107860 ~ 12120826 (+)
LOC120573979 rpl3l,LOC102799413 coding upstream 65730 12058647 ~ 12063061 (+)
rps2 rps2,LOC104918830 coding upstream 73609 12052727 ~ 12055182 (+)
rnf151 rnf151,LOC102775723,LOC100708193 coding upstream 76559 12049325 ~ 12052232 (+)
noxo1a NA coding upstream 101590 12023082 ~ 12027201 (+)
LOC120575115 haghl,LOC100699516,LOC104918824,LOC101076411 coding downstream 517 12133972 ~ 12137255 (+)
e4f1 e4f1 coding downstream 10005 12143460 ~ 12150996 (+)
grid2ipa LOC103361735,LOC102310441,LOC102202691,LOC102796762 coding downstream 17841 12151296 ~ 12177758 (+)
slc5a11 slc5a11,LOC102796461 coding downstream 44834 12178289 ~ 12185788 (+)
si:ch73-374l24.1 LOC101487097,LOC103361464,LOC102304961,LOC106957043,LOC103141622 coding downstream 432905 12566360 ~ 12684418 (+)
G154227 NA non-coding upstream 60039 12067737 ~ 12068752 (+)
G154226 NA non-coding upstream 63283 12065280 ~ 12065508 (+)
G154225 LOC105933046,LOC101076874,LOC102218385,LOC106948144,LOC103469244,LOC103141651 non-coding upstream 64519 12063970 ~ 12064272 (+)
G154215 NA non-coding upstream 108283 12020278 ~ 12020508 (+)
G154204 NA non-coding upstream 153079 11975019 ~ 11975712 (+)
G154297 NA non-coding downstream 54168 12187623 ~ 12190042 (+)
G154307 NA non-coding downstream 83421 12216876 ~ 12218005 (+)
LOC120574756 NA non-coding downstream 207945 12341400 ~ 12342350 (+)
G154367 NA non-coding downstream 268275 12401730 ~ 12401983 (+)
G154379 NA non-coding downstream 342312 12475767 ~ 12523672 (+)
G154254 NA other upstream 13599 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other upstream 35233 12089373 ~ 12093558 (+)
LOC120574068 NA other upstream 903542 11207041 ~ 11225249 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other upstream 1054965 11063859 ~ 11073826 (+)
G153808 spag9 other upstream 1375893 10752160 ~ 10752898 (+)
G154461 NA other downstream 709968 12843423 ~ 12846597 (+)
LOC120574968 LOC102294452 other downstream 883504 13016959 ~ 13026416 (+)
vasnb vasn other downstream 1522560 13656015 ~ 13692303 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other downstream 1635564 13769019 ~ 13781685 (+)
trnat-agu_6 NA other downstream 1636248 13769703 ~ 13769776 (+)

Expression


Co-expression Network