LOC120575183


Basic Information

Item Value
gene id LOC120575183
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14529438 ~ 14532650 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825840.1
AAGAAAAATCCCAATATACAAACCCACTCCACAGCAAGTTACTCTGTACTTGGAAGAGCGGGTTGCTAAACCTCTCCGTAATGACCTCTGATAATGGAAGTGAAGACATCTAACCCAAGAGTGTACATCAGTCTTCCAAAGAAATATGTTGCTGCTTTTGCTGAAAATTATGAACTGGACCATTGGTTGGTTATAAAAGAGCTGAACCCCTATGTAACTGAAAGATATGTACGAGCTTACTTTCGAGAATGGGGCACTGTCACAGCATGTAAGATTAAGATGCGCCCCAACTTGGAGGGAAAGAAGGCACTGGCGTATGTGAGGTTTTCTACAGCGGATGAAGCGGACAGAGCAGAATGGGCTGGTCCTCATTACATTGGAGGCGATGTGGAAGTAAAACAAGTTGTTAGTCCAAAGATGGAGGATTCAGATGAGGAGGTCACCGCAGGCGTTGCTACAACTCAACCACGCCGTTCAATGGGCTTGGGCTACATCCTGGAAGATGCTCAGTGGTTATGATGAGTTGGACAGTTAAAGAAATACCGTGCAACTTTATCTTTAAGTTTAAAATCATATATGTATGTTTGAATTCATTTAGAGATTGTAAACTAACGTGGCTCAGAAAAATCAACGTGGCTGCAGTGAAATATTCTGtaaacacaaagacaaaaaacactgatataaataaagcagcaaatcctcagcAAGGCCTAAGTAAGAACACCTGTCCTACACCTATGGATATTTGTTTATCTGTTTAGCTGAGTTGATgtgatatatattttattttgctgatTCTATGTTGTGTCTTATGATTGTCTACCTTGGGTGGATAATAACATTGTATTCtatgtgtttaatgtttgtctAGAACATAGTGGTGTTAAAATATAGATTATGTTAACTCCCTTTGTGCAGCCACTGTTGATGAATGCAATATGATTATCAATTTATAAATGATATGACACTGCTATACCCATCTATAATTGCCTAAAGAGATGTAGCTATATCACATAATCTAACAAatcctaaaaaataaaaataacattaaaaaataaaaatgaataaaacattg

Function

GO:

id name namespace
GO:0097159 organic cyclic compound binding molecular_function
GO:1901363 heterocyclic compound binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825840.1 True 1075 mRNA 0.37 5 14529438 14532650

Neighbor

gene id symbol gene type direction distance location
notum1a notum,LOC104918326 coding downstream 40515 14481337 ~ 14488923 (-)
LOC120575481 myadml2,LOC103373375 coding downstream 50064 14476834 ~ 14479374 (-)
pycr1a LOC103373386,LOC104918329,LOC106533854 coding downstream 53648 14472095 ~ 14475790 (-)
LOC120575491 pcyt2,LOC103373415,LOC101487187 coding downstream 77783 14441803 ~ 14451655 (-)
LOC120575370 LOC104945235 coding downstream 90327 14430021 ~ 14439111 (-)
LOC120575160 tmem235,LOC104962294,LOC100710065,LOC101469204 coding upstream 185343 14717993 ~ 14730049 (-)
fscn2a LOC104925063,LOC104962304,LOC103373227,LOC101170272 coding upstream 207887 14740537 ~ 14748030 (-)
LOC120575176 NA coding upstream 337292 14869942 ~ 14874632 (-)
LOC120575070 map2k6,LOC103373127,LOC100697168,LOC103392800,LOC102787166 coding upstream 404318 14936968 ~ 14950077 (-)
btbd17b LOC103373589,LOC104944234 coding upstream 417614 14950264 ~ 14954273 (-)
LOC120575037 NA non-coding downstream 192364 14330945 ~ 14337074 (-)
G154825 NA non-coding downstream 202502 14325973 ~ 14326936 (-)
G154788 NA non-coding downstream 430157 14078514 ~ 14099281 (-)
G154791 LOC100698953,LOC106518679,LOC103373486 non-coding downstream 441672 14085742 ~ 14087766 (-)
LOC120575453 NA non-coding downstream 583041 13936768 ~ 13946397 (-)
G154948 LOC104962285,LOC104925065 non-coding upstream 95100 14627750 ~ 14664671 (-)
G154952 cyth1,LOC103140955,LOC102194078 non-coding upstream 100528 14633178 ~ 14636802 (-)
G154953 cyth1,LOC103392816,LOC101076412 non-coding upstream 107452 14640102 ~ 14647069 (-)
G155025 NA non-coding upstream 362729 14895379 ~ 14895624 (-)
G155039 NA non-coding upstream 430583 14963233 ~ 14963846 (-)
cenpx cenpx other downstream 285 14526126 ~ 14529153 (-)
LOC120574967 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 other downstream 58008 14454837 ~ 14471430 (-)
med9 med9 other downstream 472084 14050738 ~ 14057354 (-)
tfap4 tfap4 other downstream 897602 13589483 ~ 13631836 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other downstream 1107487 13335449 ~ 13421951 (-)
LOC120574989 LOC108241285,LOC103373333,LOC106518659 other upstream 1032 14533682 ~ 14543994 (-)
LOC120574213 NA other upstream 233084 14765734 ~ 14790778 (-)
LOC120574214 bahcc1,LOC106528540,LOC108241329,LOC107083174 other upstream 262996 14795646 ~ 14828239 (-)
LOC120575102 fam104b,LOC103373210,LOC101470236,LOC107083185,LOC102083140 other upstream 319289 14851939 ~ 14857580 (-)
ush1ga LOC104944226,LOC103373181,LOC103392806,LOC106949104,LOC104925058,LOC103140944 other upstream 346977 14879627 ~ 14889482 (-)

Expression


Co-expression Network