LOC120575207


Basic Information

Item Value
gene id LOC120575207
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 24739548 ~ 24761005 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825887.1
ATGAATGCACATTTATGGAATTTCCTCCCAATGCCTGAAGGTGCTTATATAAAGCAGAGTGAATTCACAGCCTGCACTCTTGGAGGAACCTGAAGAGAGTGAAACCTGACACCAACATGCAGTACCAGTGGGCTGAAGATGACTTTGACATGCCCGAGGGTGTGGGTCGCCTGGGCCTCTCCGAGCCAGTTAGTGGTGGAAAGTATGTCATGTACCATGGCACCACCAAGAAGACAGCTCAATTAATCCTGGCCAATGGTTTTAAACAGTCTGCAAACGGGATGCTCGGCCCTGGCGTCTACCTCAGCAGAGACCTGCAGAAAGCTAGCCGCTATCCCATTGATCACCCTGAGTCTGACAGGATCGTCATAAAGGTTACGGTCAACGTGGGGAAAGTGATCGCCATCAATTATCAAGGCCACCCACGTCAGAAAACCTGGCATGACAGCAGATACGGCCAGGTGTATGACACCGCCTGGGTACCACCCAAGTGTGGAATGGTGAAGAGCGGTTTGGAAGAGGATTGTGTCTGGGATCCCAATCGGATCAAGATTCTTAAAACAATCCAACCACGCCAAGTCCAGTCCTGCGGTGGACATGGTGCACGGGGCTACATTGAACCTGACACCAACATGCAGTACCAGTGGGCTGAAGATGACTTTGACGTGCCCGGGGGTGTGGTTTGCCTGGGCCTCTCCGAGCCAGTTAGTGGTAGAAAGTATGTCATGTACCATGGCACCACCAAGAAGGCAGCTCAATTAATCTGTGCCAATGGTTTTAAACAGTCTGCAAACGGGATGCTCGGCCCTGGCGTCTACCTCAGCAGAGACCTGCAGAAAGCTAGCCGCTATCCCATTGATCACCCTGAGTCTGACAGGATCGTCATAAAGGTTACAGTCAATGTGGGGAAAGTGATCGCCATCAATCATCAAGACCACCCATATCGGAAGACCTGGCATCACTACGGCTATGACACCGCCTGGGTACCACCCAACTGTGGAATGGTGAAGAGCGGTTTGGAAGAGGATTGTGTCTGGGATCCCAATCGGATCCAGATTCTTAAAACAATCCAACCACGCCCAGTCTCAACCTGGGTTCCACTGGGCCTCGCTGCACCAGTTAATAATGAATGGTATGTCATGTACCATGGCACCACCAGCCATAATGCTCAATTAATCCTGACCACTGGTTTCAAGCAGTCTGAGAAGGGGATGCTCGGCCCTGGCGTTTACCTCAGCAGAGACCTGCAGAAAGCCAGCGCCTATCCTAAACGTCACCCTATATCTGACAAGGTTGTCATTAAGGTTATGGTCAATGTGGGGAAAGTGATCACCATCAATTATCAAGGCCACCCATATCAGAAGACTTGGCATCACTACGGCTATGACACCGCCTGGGTACCACCCATGTGTGGAATGGTGCAGAGCGGTTTGGAAGAGGATTGTGTCTGGGATCCCAATCGAATCCAGATCCTTAAAACCATCAACCCACACCTAGTGCAATGCCCATTTCAACCTTATGGTGGAGATGGTGCATTTGGCTACATGTGAGCTCTATGAGACGTTATCAAGTTATTTTGTATGctcaaatttatttttatatatttgggCATATTACATTTGTATGTGGTTACTGTGTCATTGTACCCTGGAAAATAAATGGTTGATTTTAAATCTGAA

Function

GO: NA

KEGG:

id description
ko05310 Asthma
ko05320 Autoimmune thyroid disease
ko05330 Allograft rejection
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825887.1 True 1679 mRNA 0.49 4 24739548 24761005

Neighbor

gene id symbol gene type direction distance location
LOC120573927 NA coding upstream 9099 24726726 ~ 24730449 (+)
pigq pigq coding upstream 40616 24679566 ~ 24698932 (+)
alg1 alg1 coding upstream 65607 24666071 ~ 24673941 (+)
flr LOC100700268,LOC102298840,LOC102210258,LOC101469664,LOC103366697,LOC104923377 coding upstream 83712 24640262 ~ 24655836 (+)
hoatz NA coding upstream 223815 24513542 ~ 24515733 (+)
LOC120574228 LOC102295563,LOC103366689,LOC100703873,LOC102207615 coding downstream 1185 24762190 ~ 24800304 (+)
arl6ip1 arl6ip1 coding downstream 133026 24894031 ~ 24900778 (+)
fus LOC103040960,LOC101075112 coding downstream 155663 24916668 ~ 24934552 (+)
LOC120575218 NA coding downstream 199813 24960818 ~ 24983874 (+)
LOC120575217 NA coding downstream 248944 25009949 ~ 25024600 (+)
G157764 NA non-coding upstream 74659 24664676 ~ 24664889 (+)
G157763 NA non-coding upstream 77358 24661368 ~ 24662190 (+)
G157762 NA non-coding upstream 78654 24660572 ~ 24660894 (+)
G157704 si:ch211-76l23.4,LOC102076996,LOC108256336 non-coding upstream 102438 24628667 ~ 24637110 (+)
G157697 NA non-coding upstream 215234 24516373 ~ 24524314 (+)
G157779 NA non-coding downstream 39325 24800330 ~ 24805113 (+)
G157833 anapc2 non-coding downstream 67581 24828586 ~ 24830003 (+)
G157831 LOC108427354,LOC107729502,LOC107658507,LOC107583079 non-coding downstream 100013 24861018 ~ 24863732 (+)
G157838 NA non-coding downstream 106371 24867376 ~ 24870866 (+)
G157854 NA non-coding downstream 110958 24871963 ~ 24875187 (+)
rab40c rab40c,LOC103366693,LOC107690266,LOC107567894,LOC107685905,LOC107590575,LOC103393433 other upstream 15678 24702819 ~ 24723870 (+)
grin2ca LOC103366762 other upstream 601965 24053726 ~ 24137583 (+)
G157468 NA other upstream 1839777 22896406 ~ 22899771 (+)
LOC120574981 NA other upstream 2193162 22540849 ~ 22546386 (+)
lrrc4ba lrrc4b other upstream 2644037 22063070 ~ 22095511 (+)
LOC120574235 anapc2 other downstream 91533 24852538 ~ 24859772 (+)
LOC120575219 NA other downstream 322276 25083281 ~ 25102511 (+)
srsf2b LOC104946423,LOC101476251,LOC100695205 other downstream 436643 25197648 ~ 25202835 (+)
G158004 NA other downstream 569430 25330435 ~ 25367712 (+)
zgc:158403 LOC103370216,LOC106932766 other downstream 622359 25383364 ~ 25403052 (+)

Expression


Co-expression Network