slc25a19 (slc25a19)


Basic Information

Item Value
gene id slc25a19
gene name slc25a19
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 11348216 ~ 11351460 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826300.1
GTAATGCTAGCAAATGTGCTTTCGGctttctttaactgtctatggtgGCTTGCAGTAGAAAGTTATTCTTGTCCTATATTAACGTACGTGTCGGGGTTCATTACTGTAGCTGCACCGGTATTTATGAAAGACTGTTACTATAACCTaagtgtctgtctgcctctgtcACTGTTGCAGCTCTGTGCCTCTGTACAAAGTCAACAGctgctctgttgttgttgttagcttagctaacgttagccccaAGGTCTCACTGCATGCCCTCTACATGCTATGACTTGCTAACAGGAATCTGAGGCTGTGGAGTCATGGTGGGCTATGACCCTGGGGCTGTGTGTACAGCCTTCTCACCAGAGGAGGCAGCCATGGCTGGGTCAGCTGCTGGGATGGTCACCAGGGCCCTCATCAGCCCCTTTGACGTGCTCAAAATCAGATTTCAGCTGCAGATTGAGCGCCTGTCTTCATGTAGGCCCGAGGGGAAGTACCAGGGATTATTTCAGGCATCCCGGTGCATTTATTCAGAGGAGGGACTCTCTGCTTTCTGGAAGGGCCACGTCCCTGCACAGCTCCTCTCCATCTGCTTCGGGGCTGTCCAGTTTGCCAGTTTTGAGTTAATGACAGAGGTGGTCCACAAGTCGACGCTGTATGACAGCCAGACAGCAGGAGTTCACTTTATGTGTGGTGGTCTGGCGGCATGCTCTGCTACAGTGGTCTGCCAGCCTCTGGACACACTGCGGACACGCTTTGCAGCTCAGGGAGAAACCAAGGTTTACAGGAACCTGCGTCATGCTGTGTCTACAATGTGCCGCTCAGAGGGAGTGCTAACATTTTACCGTGGCCTGTCTCCAACACTGATGGCAGTGTTTCCTTATGCTGGGctgcagttcttcttctacaATGTCTTTAAGAAACTGTTGGCTCCACCAGCTACAGCTGGAAACTCAGGAGGGGACCTAAGAAGCCTGGTCTCTGGCAGTGGAGCTGGAATAATCAGCAAAACAATGACATACCCCTTTGACCTCTTCAAGAAGAGACTGCAAGTGGGGGGCTTTGAGGCAGCCAGAGTTCACTTTGGACAGGTGCGGAGTTATAGAGGCCTGGTGGACTGCATGGTTCAAATAGCCAAAGAGGAGGGCGTCCGAGGCTTCTTCAAAGGCCTCTCACCCAGCCTTGTGAAGGCTGCACTATCAACAGGCTTCACCTTTTTTTGGTATGAATTTTTCCTCAATGCCATGCATAACCTAAAGGAAAGGCGGAGAACAAATGGCTTCACCAGAGACCTTGGGGAAAGATAGTGAAGGGAAAAAAGTAACAATGGCACAATCACGCACATCAGAAATCGACCCATGCCTCCTTCTTTGCTTGCACTTAACATATTTATCACCTGGGCCGAAgttctgtgtttttctctgtttttgtgtttatgtataAGGATGGGAAAACATAACCtcattgtatttgtttatgtgCTGTCATTACGGCTTGTTGTGTCCAaaattgcatttttgttttttatgtattttatattttagaggTTTCTAAGGGTATATATAGAAAATAAATGTCATAACATTGATCAAACTcaa
>XM_039826301.1
ACTCCCTTGTATCTGACCCGGAAGTAATGCTAGCAAATGTGCTTTCGGctttctttaactgtctatggtgGCTTGCAGTAGAAAGTTATTCTTGTCCTATATTAACCTCTGTGCCTCTGTACAAAGTCAACAGctgctctgttgttgttgttagcttagctaacgttagccccaAGGTCTCACTGCATGCCCTCTACATGCTATGACTTGCTAACAGGAATCTGAGGCTGTGGAGTCATGGTGGGCTATGACCCTGGGGCTGTGTGTACAGCCTTCTCACCAGAGGAGGCAGCCATGGCTGGGTCAGCTGCTGGGATGGTCACCAGGGCCCTCATCAGCCCCTTTGACGTGCTCAAAATCAGATTTCAGCTGCAGATTGAGCGCCTGTCTTCATGTAGGCCCGAGGGGAAGTACCAGGGATTATTTCAGGCATCCCGGTGCATTTATTCAGAGGAGGGACTCTCTGCTTTCTGGAAGGGCCACGTCCCTGCACAGCTCCTCTCCATCTGCTTCGGGGCTGTCCAGTTTGCCAGTTTTGAGTTAATGACAGAGGTGGTCCACAAGTCGACGCTGTATGACAGCCAGACAGCAGGAGTTCACTTTATGTGTGGTGGTCTGGCGGCATGCTCTGCTACAGTGGTCTGCCAGCCTCTGGACACACTGCGGACACGCTTTGCAGCTCAGGGAGAAACCAAGGTTTACAGGAACCTGCGTCATGCTGTGTCTACAATGTGCCGCTCAGAGGGAGTGCTAACATTTTACCGTGGCCTGTCTCCAACACTGATGGCAGTGTTTCCTTATGCTGGGctgcagttcttcttctacaATGTCTTTAAGAAACTGTTGGCTCCACCAGCTACAGCTGGAAACTCAGGAGGGGACCTAAGAAGCCTGGTCTCTGGCAGTGGAGCTGGAATAATCAGCAAAACAATGACATACCCCTTTGACCTCTTCAAGAAGAGACTGCAAGTGGGGGGCTTTGAGGCAGCCAGAGTTCACTTTGGACAGGTGCGGAGTTATAGAGGCCTGGTGGACTGCATGGTTCAAATAGCCAAAGAGGAGGGCGTCCGAGGCTTCTTCAAAGGCCTCTCACCCAGCCTTGTGAAGGCTGCACTATCAACAGGCTTCACCTTTTTTTGGTATGAATTTTTCCTCAATGCCATGCATAACCTAAAGGAAAGGCGGAGAACAAATGGCTTCACCAGAGACCTTGGGGAAAGATAGTGAAGGGAAAAAAGTAACAATGGCACAATCACGCACATCAGAAATCGACCCATGCCTCCTTCTTTGCTTGCACTTAACATATTTATCACCTGGGCCGAAgttctgtgtttttctctgtttttgtgtttatgtataAGGATGGGAAAACATAACCtcattgtatttgtttatgtgCTGTCATTACGGCTTGTTGTGTCCAaaattgcatttttgttttttatgtattttatattttagaggTTTCTAAGGGTATATATAGAAAATAAATGTCATAACATTGATCAAACTcaa
>XM_039826302.1
GAAGTAATGCTAGCAAATGTGCTTTCGGctttctttaactgtctatggtgGCTTGCAGTAGAAAGTTATTCTTGTCCTATATTAACGTACGTGTCGGGGTTCATTACTGTAGCTGCACCGTGCTAACAGGAATCTGAGGCTGTGGAGTCATGGTGGGCTATGACCCTGGGGCTGTGTGTACAGCCTTCTCACCAGAGGAGGCAGCCATGGCTGGGTCAGCTGCTGGGATGGTCACCAGGGCCCTCATCAGCCCCTTTGACGTGCTCAAAATCAGATTTCAGCTGCAGATTGAGCGCCTGTCTTCATGTAGGCCCGAGGGGAAGTACCAGGGATTATTTCAGGCATCCCGGTGCATTTATTCAGAGGAGGGACTCTCTGCTTTCTGGAAGGGCCACGTCCCTGCACAGCTCCTCTCCATCTGCTTCGGGGCTGTCCAGTTTGCCAGTTTTGAGTTAATGACAGAGGTGGTCCACAAGTCGACGCTGTATGACAGCCAGACAGCAGGAGTTCACTTTATGTGTGGTGGTCTGGCGGCATGCTCTGCTACAGTGGTCTGCCAGCCTCTGGACACACTGCGGACACGCTTTGCAGCTCAGGGAGAAACCAAGGTTTACAGGAACCTGCGTCATGCTGTGTCTACAATGTGCCGCTCAGAGGGAGTGCTAACATTTTACCGTGGCCTGTCTCCAACACTGATGGCAGTGTTTCCTTATGCTGGGctgcagttcttcttctacaATGTCTTTAAGAAACTGTTGGCTCCACCAGCTACAGCTGGAAACTCAGGAGGGGACCTAAGAAGCCTGGTCTCTGGCAGTGGAGCTGGAATAATCAGCAAAACAATGACATACCCCTTTGACCTCTTCAAGAAGAGACTGCAAGTGGGGGGCTTTGAGGCAGCCAGAGTTCACTTTGGACAGGTGCGGAGTTATAGAGGCCTGGTGGACTGCATGGTTCAAATAGCCAAAGAGGAGGGCGTCCGAGGCTTCTTCAAAGGCCTCTCACCCAGCCTTGTGAAGGCTGCACTATCAACAGGCTTCACCTTTTTTTGGTATGAATTTTTCCTCAATGCCATGCATAACCTAAAGGAAAGGCGGAGAACAAATGGCTTCACCAGAGACCTTGGGGAAAGATAGTGAAGGGAAAAAAGTAACAATGGCACAATCACGCACATCAGAAATCGACCCATGCCTCCTTCTTTGCTTGCACTTAACATATTTATCACCTGGGCCGAAgttctgtgtttttctctgtttttgtgtttatgtataAGGATGGGAAAACATAACCtcattgtatttgtttatgtgCTGTCATTACGGCTTGTTGTGTCCAaaattgcatttttgttttttatgtattttatattttagaggTTTCTAAGGGTATATATAGAAAATAAATGTCATAACATTGATCAAACTcaa
>XM_039826303.1
TCCCTTGTATCTGACCCGGAAGTAATGCTAGCAAATGTGCTTTCGGctttctttaactgtctatggtgGCTTGCAGTAGAAAGTTATTCTTGTCCTATATTAACTGCTAACAGGAATCTGAGGCTGTGGAGTCATGGTGGGCTATGACCCTGGGGCTGTGTGTACAGCCTTCTCACCAGAGGAGGCAGCCATGGCTGGGTCAGCTGCTGGGATGGTCACCAGGGCCCTCATCAGCCCCTTTGACGTGCTCAAAATCAGATTTCAGCTGCAGATTGAGCGCCTGTCTTCATGTAGGCCCGAGGGGAAGTACCAGGGATTATTTCAGGCATCCCGGTGCATTTATTCAGAGGAGGGACTCTCTGCTTTCTGGAAGGGCCACGTCCCTGCACAGCTCCTCTCCATCTGCTTCGGGGCTGTCCAGTTTGCCAGTTTTGAGTTAATGACAGAGGTGGTCCACAAGTCGACGCTGTATGACAGCCAGACAGCAGGAGTTCACTTTATGTGTGGTGGTCTGGCGGCATGCTCTGCTACAGTGGTCTGCCAGCCTCTGGACACACTGCGGACACGCTTTGCAGCTCAGGGAGAAACCAAGGTTTACAGGAACCTGCGTCATGCTGTGTCTACAATGTGCCGCTCAGAGGGAGTGCTAACATTTTACCGTGGCCTGTCTCCAACACTGATGGCAGTGTTTCCTTATGCTGGGctgcagttcttcttctacaATGTCTTTAAGAAACTGTTGGCTCCACCAGCTACAGCTGGAAACTCAGGAGGGGACCTAAGAAGCCTGGTCTCTGGCAGTGGAGCTGGAATAATCAGCAAAACAATGACATACCCCTTTGACCTCTTCAAGAAGAGACTGCAAGTGGGGGGCTTTGAGGCAGCCAGAGTTCACTTTGGACAGGTGCGGAGTTATAGAGGCCTGGTGGACTGCATGGTTCAAATAGCCAAAGAGGAGGGCGTCCGAGGCTTCTTCAAAGGCCTCTCACCCAGCCTTGTGAAGGCTGCACTATCAACAGGCTTCACCTTTTTTTGGTATGAATTTTTCCTCAATGCCATGCATAACCTAAAGGAAAGGCGGAGAACAAATGGCTTCACCAGAGACCTTGGGGAAAGATAGTGAAGGGAAAAAAGTAACAATGGCACAATCACGCACATCAGAAATCGACCCATGCCTCCTTCTTTGCTTGCACTTAACATATTTATCACCTGGGCCGAAgttctgtgtttttctctgtttttgtgtttatgtataAGGATGGGAAAACATAACCtcattgtatttgtttatgtgCTGTCATTACGGCTTGTTGTGTCCAaaattgcatttttgttttttatgtattttatattttagaggTTTCTAAGGGTATATATAGAAAATAAATGTCATAACATTGATCAAACTcaa

Function

symbol description
slc25a19 Predicted to enable thiamine transmembrane transporter activity. Predicted to be involved in thiamine pyrophosphate transmembrane transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of mitochondrial inner membrane. Human ortholog(s) of this gene implicated in inherited metabolic disorder and microcephaly. Orthologous to human SLC25A19 (solute carrier family 25 member 19).

NR:

description
PREDICTED: mitochondrial thiamine pyrophosphate carrier

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15108 SLC25A19, DNC, TPC1; solute carrier family 25 (mitochondrial thiamine pyrophosphate transporter), member 19

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826300.1 True 1586 mRNA 0.48 7 11348239 11351460
XM_039826301.1 False 1515 mRNA 0.48 8 11348216 11351460
XM_039826302.1 False 1427 mRNA 0.48 7 11348236 11351460
XM_039826303.1 False 1411 mRNA 0.48 7 11348218 11351460

Neighbor

gene id symbol gene type direction distance location
mrps7 mrps7,LOC102783021 coding upstream 6733 11338051 ~ 11341483 (+)
nup85 nup85 coding upstream 20003 11319249 ~ 11328213 (+)
LOC120574067 NA coding upstream 138378 11202778 ~ 11209838 (+)
LOC120574489 NA coding upstream 256070 11088206 ~ 11092146 (+)
LOC120574484 NA coding upstream 289993 11055103 ~ 11058223 (+)
zgc:161969 LOC103361864,LOC104946073,LOC101481854,LOC100704716 coding downstream 111298 11462758 ~ 11465509 (+)
lmtk2 lmtk2 coding downstream 150823 11502283 ~ 11532752 (+)
bri3 bri3 coding downstream 200507 11551967 ~ 11557728 (+)
LOC120574416 NA coding downstream 284158 11635618 ~ 11637632 (+)
LOC120574840 NA coding downstream 431937 11783397 ~ 11786551 (+)
G154038 sumo2 non-coding upstream 29723 11310425 ~ 11318493 (+)
G153917 NA non-coding upstream 265509 11081649 ~ 11082707 (+)
G153916 NA non-coding upstream 267558 11079752 ~ 11080658 (+)
G153915 NA non-coding upstream 268536 11078455 ~ 11079680 (+)
G153872 NA non-coding upstream 339166 10973335 ~ 11009050 (+)
G154051 NA non-coding downstream 750 11352210 ~ 11352460 (+)
G154109 NA non-coding downstream 138446 11489906 ~ 11493649 (+)
G154124 LOC108239293,LOC104946078,LOC104918844,LOC101480216,LOC102194634,LOC100693182 non-coding downstream 147389 11498849 ~ 11501165 (+)
G154149 NA non-coding downstream 292696 11644156 ~ 11649921 (+)
LOC120574841 NA non-coding downstream 340448 11691908 ~ 11695459 (+)
LOC120574068 NA other upstream 122967 11207041 ~ 11225249 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other upstream 274390 11063859 ~ 11073826 (+)
G153808 spag9 other upstream 595318 10752160 ~ 10752898 (+)
G153646 NA other upstream 1006593 10250377 ~ 10341623 (+)
G153433 NA other upstream 1281474 10065460 ~ 10066742 (+)
G154254 NA other downstream 734401 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other downstream 737913 12089373 ~ 12093558 (+)
G154461 NA other downstream 1491963 12843423 ~ 12846597 (+)
LOC120574968 LOC102294452 other downstream 1665499 13016959 ~ 13026416 (+)
vasnb vasn other downstream 2304555 13656015 ~ 13692303 (+)

Expression


Co-expression Network