LOC120575161


Basic Information

Item Value
gene id LOC120575161
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14730618 ~ 14738716 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641958.1
tccaaatgaaaaagaaaagacagcatGCTGGTGCTGGTAGCTTTGTAAACCGAAGCTAAACGTTTAAAAGATATGACGTTGTTGTGTGAGGAACAATAACGTAAACATGTGGAGGGACGCACTGGTGGAGCCTGTCGAACTGGCTTTCGCATCAGTCTCTGAGATTCACTGCCAAGGTCCAGGTGGTTTCTGTCCCGTAATGCTGCCTCTGAACGAAAATtcgttgtggattagctagacaggtaggct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641958.1 True 249 lncRNA 0.46 3 14730618 14738716

Neighbor

gene id symbol gene type direction distance location
socs3a LOC104962285,LOC104925065 coding upstream 65926 14662028 ~ 14664692 (+)
cyth1a cyth1,LOC104962259,LOC103392816,LOC102194078,LOC100709795,LOC108277039,LOC104925066 coding upstream 83549 14602562 ~ 14647069 (+)
usp36 usp36 coding upstream 129062 14582603 ~ 14601556 (+)
timp2b LOC103373294,LOC104925068 coding upstream 148958 14573400 ~ 14581660 (+)
LOC120574730 NA coding upstream 167865 14558829 ~ 14562753 (+)
hid1a LOC104925062,LOC103373194 coding downstream 119665 14858381 ~ 14869055 (+)
amn NA coding downstream 137015 14875731 ~ 14877562 (+)
LOC120573965 NA coding downstream 152351 14891067 ~ 14895632 (+)
zgc:112148 LOC104944227,LOC103373156 coding downstream 157708 14896424 ~ 14899792 (+)
LOC120575420 LOC104944239,LOC104925055 coding downstream 169775 14908491 ~ 14914801 (+)
G154883 NA non-coding upstream 259631 14470512 ~ 14470987 (+)
G154881 NA non-coding upstream 267155 14463262 ~ 14463463 (+)
G154880 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 non-coding upstream 271465 14454839 ~ 14459153 (+)
G154875 NA non-coding upstream 286480 14443092 ~ 14444138 (+)
G154872 LOC104945235 non-coding upstream 291471 14437476 ~ 14439147 (+)
G154982 NA non-coding downstream 90786 14829502 ~ 14830164 (+)
G155032 LOC104944234,LOC102212559,LOC101473443,LOC102786862,LOC102303581 non-coding downstream 213617 14952333 ~ 14954301 (+)
G155036 ccdc137 non-coding downstream 229227 14967943 ~ 14969536 (+)
G155040 NA non-coding downstream 232536 14971252 ~ 14971468 (+)
G155041 NA non-coding downstream 232806 14971522 ~ 14971790 (+)
G154743 LOC102293104 other upstream 876332 13847139 ~ 13854286 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other upstream 948933 13769019 ~ 13781685 (+)
trnat-agu_6 NA other upstream 960842 13769703 ~ 13769776 (+)
vasnb vasn other upstream 1038315 13656015 ~ 13692303 (+)
LOC120574968 LOC102294452 other upstream 1704202 13016959 ~ 13026416 (+)
si:dkey-282h22.5 NA other downstream 242520 14981236 ~ 14984745 (+)
LOC120574428 NA other downstream 246984 14985700 ~ 14986913 (+)
LOC120575440 LOC102304323 other downstream 253297 14992013 ~ 14992508 (+)
G155088 NA other downstream 397075 15135791 ~ 15139706 (+)
ndel1b ndel1,LOC104940291 other downstream 628204 15366920 ~ 15404605 (+)

Expression


Co-expression Network