LOC120575351


Basic Information

Item Value
gene id LOC120575351
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 17202018 ~ 17203417 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641976.1
CTGAATGTGTTTTGCTTGGGGTAGAGGCGTgttaacattctgagtttcatcagatatattttttatttgttcaaaatctgcagaaaATCTGCGGAGGTGTCAACGGAATTCCATGTGGGCCTGCTTCTACGCTATTGtggGCCAGAGAGGAATGGTAGGGGATCCGGTGAGGGCCCTCAGGACTCCCACCTCATGGGCCCCCTGCTCCATTCTGCTGCGGCTGTAAGGCAAGATTATTCTGCTGTTTAGTTCCACCAGATGCGGCAGCGCCACTGGATGGGCACTGTCTGGCCCTGATGAGCAGATCTAAGAGGGATTAGTGGGCTGTTGTGGTGGATCGGCAAGAACAGTGGGAGGCTGTccacacacagctgtgtgtttgtgtgtttcataaTGCTCTGGCCTCTGGCCTGTATCTGGCTTTGGCTCCAACCCTGAACCACCTTTCCCTCCCACTGACCTCACAGTTCAGGGAGCTCTCGGACTACAGACAGCAGGAACTCCGAACTTTCTGGAACAGCATGAAAGCTTTTAGAGAAACACGATTCTCCCTCAAGGATTGTGGGAGAGATGTGCTCAGACAGACATACCGTATCAtctgaaagtgtttttttttggctgcaATTGTTTGGGATTTCTACAGCTTTACAAACATGTAAAGCATTCATCAACAAATCATTTTAGAAAGTATTTTTTGCCGAAGAAAGCCATTTTTGTATCAATACTATATTAAAGGTATATTTCCTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641976.1 True 749 lncRNA 0.47 2 17202018 17203417

Neighbor

gene id symbol gene type direction distance location
LOC120575136 NA coding upstream 56315 17135780 ~ 17145703 (+)
igfals igfals coding upstream 66392 17132749 ~ 17135626 (+)
shisa9b LOC103368695 coding upstream 95096 17090419 ~ 17106922 (+)
snrnp25 snrnp25 coding upstream 164271 17035247 ~ 17037747 (+)
cdip1 cdip1,LOC103374307 coding upstream 169035 17027335 ~ 17032983 (+)
LOC120574435 LOC101474126,LOC102193996 coding downstream 103969 17307386 ~ 17309752 (+)
LOC120574436 NA coding downstream 427009 17630426 ~ 17634264 (+)
kdm8 kdm8 coding downstream 481909 17685326 ~ 17692726 (+)
ubfd1 ubfd1 coding downstream 507753 17711170 ~ 17715695 (+)
uncx uncx,LOC102794453 coding downstream 644852 17848269 ~ 17851534 (+)
G155807 unkl,LOC106934033 non-coding upstream 39815 17161182 ~ 17162203 (+)
G155788 NA non-coding upstream 83987 17117619 ~ 17118031 (+)
G155743 NA non-coding upstream 185666 17012418 ~ 17016352 (+)
G155684 LOC100174873,LOC107596828,LOC107703325 non-coding upstream 261763 16929371 ~ 16940255 (+)
G155688 LOC100174873 non-coding upstream 269784 16925063 ~ 16932234 (+)
LOC120575242 NA non-coding downstream 12708 17216125 ~ 17231676 (+)
G155874 NA non-coding downstream 120113 17323530 ~ 17323859 (+)
G155882 NA non-coding downstream 178501 17381918 ~ 17382160 (+)
G155885 NA non-coding downstream 230101 17433518 ~ 17433726 (+)
G155917 NA non-coding downstream 487207 17690624 ~ 17697287 (+)
raver1 NA other upstream 432777 16757645 ~ 16769241 (+)
cmc4 NA other upstream 467674 16733456 ~ 16734344 (+)
olfm2a olfm2,LOC104918560,LOC107378344,LOC100706999 other upstream 638021 16520982 ~ 16563997 (+)
col5a3a col5a3,LOC104952480,LOC102201017,LOC101485068,LOC102299321,LOC100695815,LOC107378343,LOC108243746 other upstream 700314 16451233 ~ 16501704 (+)
camsap3 NA other upstream 814496 16315832 ~ 16387522 (+)
usp31 usp31,LOC103368689,LOC101484509,LOC102212874 other downstream 69242 17272659 ~ 17292266 (+)
hs3st4 hs3st4,LOC100711185 other downstream 211158 17414575 ~ 17503644 (+)
rmi2 rmi2,LOC102793083 other downstream 513322 17716739 ~ 17724229 (+)
pla2g10 LOC104918718,LOC100698203,LOC102215607,LOC101486881,LOC102793376,LOC102313624,LOC103360505,LOC105922122 other downstream 533562 17736979 ~ 17741144 (+)
axin1 axin1,LOC104966034,LOC107564695 other downstream 547460 17750877 ~ 17791408 (+)

Expression


Co-expression Network