G168973 (LOC103363373,LOC104958000,LOC104926337,LOC100697704,LOC102781095)


Basic Information

Item Value
gene id G168973
gene name LOC103363373,LOC104958000,LOC104926337,LOC100697704,LOC102781095
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 26707143 ~ 26708726 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU229116
TCCTCATCTTGCTCTCTGTTAAGGGAGTTGAGTGCCAGGTGAAGGGACTGAGCCGACGGCAGGGAAtgtcctccctccctgtctctctgccaAGGTTTGGGTTTGATGAGTGTGCTAGGGGCGGACGGTGGAGGCGAAAAGGACACAGGTGACGGTGGAGAGGCAGAGCTGGGAGAGGGCGAGCGTGGATATGCTGCATCTCCGTCTTGCTCAATTCCTACATCTTCGGCTTTATTCAAGAGCCTCTTCAGCGAGCTCCGGCCATCGTCGTACCCGGATCCTGACCTGCGGCCCATAAAATCAAGGGCAGCCATTTTTCCCTGCTGAAGCCGGCGTCGGCCAGCACGGTCCGTTAGCTGAGACTGTGCATATTCCTGGAGGTTTTGACAGTCCAGGAGGGCAAGGCCTGTTCCGTTACTGCCATTTTGGGCCGGGGTTGCACAGGTCTTCCCGACTCCTATTCCCATCCCGGCACAGTGATTCTTTTGGGCTTTCGAATGGGTCATCTTCTTGGCCAGTTCTTCAGGCCAGATAGTACGCACGCTGTAGTCATCATCATCGGCTTGGAACATACCCATCGAATGAGCTGCTCCGATGCCTCTTCCAGGGGGTTTGTCTCTGCGAGGGTTAAATGTCACCACTATGGGGTCGCTGCTGCAGTAGCTGCAGGTGGAGCTGCCTGTCTGAGCGGATTTGGGGATGCAGCCTGTGACGCAGCTCTGTATCGCCCGGAGAGGGGCCGAGGATGACAGCGGGGTACAGGGCAGGCATCCCCCCACCAGTTTTTTACGAAGGATAGCAGGACTCTCAAAGTTTCCGGCCTCGCCAGAGCAGGAGGCACAGCGGAGAGGTTTGAACAGGGTTGCTCGGCAGTCAGACACAGTGCTGTTAGAAGATGAGGTGTTGGaggtggaggcggtggagaGACACCCACCCAGATTTCTTAGGCCCATTTCCTTGCCTCCTCTCTTCACTGCTCCGACATTATGAACACGGGAAAACGAGGCGGAAGAGCTTCCTCCACCTCCTTGGCAGCTAGCAGGGTGCCCCTTACACCCTCTGCATCTTACCAACCTCCAGCAGCCACAACTGAATGGGTGGGTGCAGTCGATGGTGCAGGTATGATCAGGGCTGGGAAACCCTCCAGCATGGGAGGAGCCGGGGGAGAGGGGTAGACCATGAAGAATGTGAGGGTGGAGATCCCTGGTGCGGGACGGATGCGGCTGGCTGAGTTGCTGAAATGAGACCGGGACATGGGTGGGCTGGGAAGGAGGGGATGACGGATAGTGGGAGTTTAGTATGGAGGCATGGGGCACAGGGACGGAGTTTTGGTGGTAGGGCAAACTGTGACTATTTTGGCTTTGATGGACAGTTCCCAGTTTGGAATTCTTATTGCGACCTATAGAGGGAAATTCCTGGTCGCCTCTGTTAAGAAAACTAGTGTTTTCCTTTTCACTCCTGAACTTATGCTGCTGCGCCTGAGCTGGGACAAATTGTAGGCCACCTTTGGGGGAAGATGACAGCTGAATATGGCGACTTCGCTGTGACTTGTGTTCAGCACCACTTGGCCTCCCTGCAGTTCCA

Function

NR:

description
PREDICTED: uncharacterized protein LOC103363373

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229116 True 1584 lncRNA 0.56 1 26707143 26708726

Neighbor

gene id symbol gene type direction distance location
prdx5 NA coding upstream 25991 26677283 ~ 26681152 (+)
LOC120544052 kcnk4,LOC101470327,LOC104926336 coding upstream 53200 26640316 ~ 26653943 (+)
adssl LOC103133900,LOC102196784,LOC102782943,LOC103363363,LOC107082552,LOC100708095 coding upstream 68969 26626662 ~ 26638174 (+)
kif4 kif4a,LOC102783241 coding upstream 92120 26595941 ~ 26615023 (+)
gabra3 gabra3,LOC103133906,LOC103363372,LOC102292396,LOC101472157,LOC102198311 coding upstream 180299 26412161 ~ 26526844 (+)
cnih2 cnih2,LOC100706298,LOC107091387,LOC108276897 coding downstream 62472 26771198 ~ 26783324 (+)
LOC120544222 NA coding downstream 262594 26971320 ~ 26975490 (+)
LOC120543589 NA coding downstream 401979 27110705 ~ 27116039 (+)
aspa aspa coding downstream 408485 27117211 ~ 27131295 (+)
abr abr,LOC103375456 coding downstream 427291 27136017 ~ 27288433 (+)
G168972 LOC104926337,LOC103394890,LOC103363373,LOC101166327,LOC105932178 non-coding upstream 316 26706579 ~ 26706827 (+)
LOC120544072 NA non-coding upstream 82637 26622770 ~ 26624506 (+)
G168940 LOC103376870 non-coding upstream 87370 26619525 ~ 26619773 (+)
G168889 NA non-coding upstream 94424 26574846 ~ 26612719 (+)
G168887 NA non-coding upstream 173112 26533731 ~ 26534031 (+)
G169010 LOC106511527,LOC107091377,LOC100703904,LOC107386668,LOC101466262,LOC108233807 non-coding downstream 115877 26824603 ~ 26827050 (+)
G169011 LOC108233807,LOC100703904,LOC106511527,LOC101466262 non-coding downstream 118377 26827103 ~ 26829684 (+)
G169018 NA non-coding downstream 130266 26838992 ~ 26839557 (+)
G169027 NA non-coding downstream 248969 26957695 ~ 26960639 (+)
G169060 NA non-coding downstream 330128 27038854 ~ 27081661 (+)
banf1 banf1,LOC106523121,LOC104926323,LOC108233898 other upstream 19880 26681536 ~ 26687263 (+)
esrra esrra,LOC103363365,LOC100707827,LOC104926321,LOC106534575 other upstream 31348 26659358 ~ 26675795 (+)
LOC120544064 tmem164 other upstream 138643 26543796 ~ 26568500 (+)
nlgn2b nlgn2b,LOC104920019,LOC101475673,LOC100709892,LOC102787387 other upstream 483698 26000063 ~ 26223445 (+)
LOC120543603 LOC103357742,LOC104968170 other upstream 814612 25868154 ~ 25892531 (+)
G169042 stip1 other downstream 253480 26962206 ~ 26965040 (+)
shpk shpk,LOC102781293 other downstream 811305 27520031 ~ 27531315 (+)
ftr82 LOC104966639,LOC103359483,LOC104933521,LOC108233798,LOC106511051 other downstream 2087786 28796512 ~ 28802885 (+)
LOC120544198 vmp1 other downstream 2173008 28881734 ~ 28942332 (+)
G169789 map6 other downstream 3237148 29945874 ~ 29971107 (+)

Expression


Co-expression Network